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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0159700 |
| Transcript ID | LotjaGi6g1v0159700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger BED domain-containing protein DAYSLEEPER; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp|Q6AVI0|RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2; TrEMBL-Plants: tr|A0A151RYP2|A0A151RYP2_CAJCA Putative AC transposase; Found in the gene: LotjaGi6g1v0159700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44060812..44065623) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAAACCAAATAAAAGCAAATAGTGGTAGAAAAACATAAGAAGAAGCGACAATAATTATAAGAGTAACAGTGAGAAAA AAAAAACTCAGGCCATCGTGGCTTATTTACAGTTTCGAAGCCGAAAATTTCTTATTCATAGCAGAACGAAAACCCTAGAA TTCCCACCCCATCATCTCAATCGATCGGTTTCAGAACCATGCCGGTTGTAATCGATCGTCGGAATCTCGCCGGAAACCGT CGTGCTTGAAAGGTACCCTCTTCTCTTTCCGTCACTGTCTTGCTTTTCCTCCCCCTTTATGTAACCTTCGCATTTCTCCT TCATAGAATCGACTCGTGCATTGGCATAACCATCGCATTCACTCATCATCGATACCTTGTGCATGCCCATTCATCACAAA TCAGCAACACGATTGTATGATTTTGTCCAAATTGTTAAACCTAAATTTGATTTTTTTTTCCTTGGATTTTTCTTTTATCA TTTTATTGTTTCCTGCCCGAGAAAATCATGCAACATAATCTGAAATAAAAATAAAAATTTGTGGTTTATATAGTCATATT TCATGTAGCAATTAGGGTTGATGTGATGTATGTTTATTCAGATGTGCTGGTTTTCTTTTCAGTCTTTAAAATTATATTTT TCGTTGCATGTCCGTTTGTCGATTTTATTTTGGTTTCTTTGTGCTGGCATTCTGGACTTCAATCTTTTATATTGTAAGCA GGGACTTTATTCGGATTTTGCTGGACCGAGTTCAGGGAGCACTGCCTGCGACCAAATTTTTTTTTTCATTGCAAATGCTG GCCATTCGGGTTGTGTAATATATAGAGAAGGATCAGGTAACTTCGAATCGAAATTCTTGGAGTTTGGTTATTTTTACTGC TGGTATGAACATACATGCTCGTTACTTGTTGTGTTTTTTTTATGACTCGCTGTAGTAAATTGGGAAAACAATGCATATCT GTTAATTTGAGAGGTTAAATTAGGAGAAGAGTTTGGCTTCCAAAAGGGTCATGGATTGGGTTTAATGATAATTCATGGAT ATATTTTGTTATTAATGTTAAGGTAGTAGACTTTGTTCATGAGCATTGTCAGGTATTGATTAGTGTAGATCCTAGAGTAG TTTTCAGTAATAAGCATTAGGTGATGAGATATATTGAAAACGTTTAGAAACAAAATCAGTAGTTTAAGAGTCTGATTTGA TTGAATGGATTATCCACCTGAAAGTTACACAGTTTACTTCTAGAGGTTTAGTTTTCCTCCGAGCTTTTACGCATGTAGCA GGTGTTTGACTTGGGCATCTGTGAATATTTTATTACATATTGAGTTTATTTCCAAAATCCTCCTTCCTCTTTAATTTTAA TACATCCTGCACCCTTCCCAATTCTTTTACTCAAATATTTATTGGATGTACTAGATACTGATCAAGGGTAAACTGAAATA ACCAGTTACCTAAAATAATGGTGTCAATCCGAAGAAATTTGGTGCCTAAAACTGGATTTGGTTCTCTTGAACATGGGCTT CCAAGGTGTGTTTTTGTCCTCTTCAAAATGGTGAAGGTTGGGATTCTGACCCCACAAATGGACTGAAAAAGGCAAGTGAA GTCTGGATTTGGCTTCCCTAAGGTGCACATCACTTTAGAAGGTGAAGTAAGCTATCATAACTGTTGATTGAGAAATCAAT GGTTGAGAATTAAAGAATACCATAATGTGCTAGTATATGCTCACAAACACAACCGTTGTTTTTTCACTCAACAGCTGTGA TGATTTACTTTACTCTCCCTCACTTTAGAGGAGCCAAATCCGTGAATTATGACCATTTGTCCATACATGTTATGGTTATG TGCCTTGCAGATAACTATTAGAACCTTTGGAACCCATGAAATTAATATTAGGTGCGGTCTGGTTGAATTTTCAATCGGCA AAATATGATTTTTCTATAATAAAGTGTGTACTATACTACTATTACATGTTGGAGAAGGTTTGTTGATGTGGTCACTCTTT TGTAGAAGCCGATAAGAGAGTTTTGTTTTTATTTATTACCCCTCTTAAATAAACCTTCTATGTATGGTATTTCCCTTTTC TCTTTTACTTTATGGTGATGTTTTATTATTTATTTTTTAAGTTTTAAACCTTCTTGCACTTGCATTTTCCTCATTATAAA CACATGTGCAGAAAATGCGAAGATGCTATCTTGTCCATTTTATTTCTGTACCTTTCTGAATGGAGAATGATTGAATTGAA TATAATGGGCATGCTTTTGTTCCAGGTTTATGCGATGGACATGTCTGATGCCGTAATTGTCAAATCTAGCAGGTTGAAAT CTGTTGTATGGAATGATTTTGATAGGATTAAAAAAGGCGACACATGTGTGGCTGTTTGCAGGCATTGTAATAAGAAACTG AGTGGATCAAGTACCAGTGGAACATCACATCTAAGGAACCATTTAATCAGGTGTCAGAGAAGGTCTAGCCATGGCATAGC ACAATACATTACTGCGAGAGATAAGAGAAAGGAAGGGACTCTTGCAATTGCGAATTTCAATATAGATCAAGATCCAAACA AAGATGATACCCTTAGCCTTGTGAATATCAAATTTGAGCAGGCACAGTTGAAAGAGGACTCTGTAAGTACTGGAACTAGT AACTTTGATCAAAGACGGAGTCGATTTGATCTTGCTCGCATGATTATTCTACATGGATATCCATTGGCTATGGTTGAACA TGTTGGTTTCAGAGGTTTTGTAAAAAATCTACAGCCATTATTTGAGCTTGTGACAATCAATAGGGTTGAGGCTGATTGTA TTGAGATTTATGAGAAAGAGAGAAAGAAGATGAATGAGACATTGGATAAATTGCCTGGAAAAATCAGTGTTAGTGTTGAT GTGTGGACTGCTATGGGTGATGCTGAGTATTTGTGTTTGACATCAAATTACATAGATGAATCATGGCAATTAAGAAGGAG GATATTAAATTACATAAGGGTTGATTCTTCTCACACTGAGGATATGCTTTCAGAAGCTATCATGACTTGCTTGATGGATT GGGATATTGACCGTAAATTGTTCTCCATGATATTGGATAGTTGTTCTACCTGTGATAACATTGCTGCTAGAATCGGTGAG AGACTTCTGCAAAACAGGTTTCTTTATTGTAACGGTCAGTTATTTGACATTCGCTGTGCTGCTAATGTTCTTAATGTCAT GGTTCAGCTTGCTTTGGGAGCTGTGAGTGAAGTTGTAAATAAGATTCGAGAAACTATTCATTATATTAAAAGTTCACAAA CTACACTGGCAAAGTTCAATGAGATGGCTAAAGAAGTTGGGATCCTCAGTCAAAAGTGCCTACTTCTAGATAATGCATTG CAATGGAATTCTACATATTCAATGCTTGAAGTTGTCTTAGAATACAAGGATGTTTTTATTCTTTTGCAAGAAAATGATAC TTCCTATAGAATCTGTTTAACTGATGTAGAGTGGGAGAGAATCACTGCAGTTACCAGCTACTTGAAGCTTTTTGTTGAGG TTATAAATGTTTTCACCAAGAGCAAGTATCCAACTGCAAATATTTATTTCCCTGAGCTCTGTGATGTTAAGTTGCATTTG ATTGAATGGTGCAAGAACTCTGATGAGTATGTCAGTTCTTTGGCGTTAAAGTTGAGAAGCAAGTTTGATGAGTATTGGGA GAAATGCAGCTTAGGGTTGGCAGTTGCTGCCATGTTAGACCCTAGGTTCAAGATGAAGCTGGTAGATTATTATTATCCAC AAATCTATGGTAGCTCATCTGCCGGTCGCATTGAAGAGGTCTTTGAGGGTGTGAAGGCTCTGTACAATGAACATTCTATA GGCTCCCCATTAGCTTGCCATGATCAAGGTTTAGCCTGGCAAGTCAGTAATGGTCAACTTTGCTTGCCAAGTTCTGCAAA GGATTCCAGGGATAGACTGATGGGATTTGACAAATTCCTCCATGAAACTTCTCAAGGTGAAGGTGCAAAATCAGATCTAG ACAAGTACTTAGAAGAACCTCTCTTTCCACGTAATGTTGATTTCAACATATTAAATTGGTGGAGAGTTCACACTCCCAGG TATCCTGTCTTATCCATGATGGCACGAAATGTTTTAGGGATTCCAATGTCAAAAGTCCCACCCGAGTTGGCATTTAACTA TAGCGGAAGAGTCCTTGATCGTGATTGGAGCTCACTTAATCCAGCAACTGTCCAAGCTTTGGTGTGTTCACAAGATTGGA TTAGGAGTGAACTGGAAAACTAGAATTGCTTTTCCCCTGCATTTCAACTGTACATGCCAACTCTCTTAGAAGTATCTCCA TTGTAAGTTAGATCTTCTAATTTCACATTTCAATTTTCTTGACCTTTTTGTATGCAGATTATATTTAGCCCATAGCCTTA TGCAACTAAGCGAGTTAATTACTATTTTATTTGTTAAGTTGGTTTTTAATATTTTTGGTAATCTGTGGCTTGTTGAGAAC AAGCGATCTTGTCATGTCCGCCAATAGAGCTATAAACATTTGCTGCCACAAGCGAACGATCAATCTTCATTTCAAGCACA CCAATGTTTAACGTAATTAGATTCGTTGTGTTCACAATACGATCCTACTGTTTGAGTTTGTTTTTTCTTTATTCACTACA CTATTTGATATGGATAATAGATTTTTTTTGTTTAAGCCTGATATGGATGAATAAATGTTTGGCTAAATGTTTTTATGAGA ATATAAGAATAATTTACGACCGTTAGATCTTTTTATGAATGACTCATATTAAAACAAATTAATCGTCACAGGATCAATTA AAAAATTCATGG
CDS sequence (LotjaGi6g1v0159700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATGTCTGATGCCGTAATTGTCAAATCTAGCAGGTTGAAATCTGTTGTATGGAATGATTTTGATAGGATTAAAAA AGGCGACACATGTGTGGCTGTTTGCAGGCATTGTAATAAGAAACTGAGTGGATCAAGTACCAGTGGAACATCACATCTAA GGAACCATTTAATCAGGTGTCAGAGAAGGTCTAGCCATGGCATAGCACAATACATTACTGCGAGAGATAAGAGAAAGGAA GGGACTCTTGCAATTGCGAATTTCAATATAGATCAAGATCCAAACAAAGATGATACCCTTAGCCTTGTGAATATCAAATT TGAGCAGGCACAGTTGAAAGAGGACTCTGTAAGTACTGGAACTAGTAACTTTGATCAAAGACGGAGTCGATTTGATCTTG CTCGCATGATTATTCTACATGGATATCCATTGGCTATGGTTGAACATGTTGGTTTCAGAGGTTTTGTAAAAAATCTACAG CCATTATTTGAGCTTGTGACAATCAATAGGGTTGAGGCTGATTGTATTGAGATTTATGAGAAAGAGAGAAAGAAGATGAA TGAGACATTGGATAAATTGCCTGGAAAAATCAGTGTTAGTGTTGATGTGTGGACTGCTATGGGTGATGCTGAGTATTTGT GTTTGACATCAAATTACATAGATGAATCATGGCAATTAAGAAGGAGGATATTAAATTACATAAGGGTTGATTCTTCTCAC ACTGAGGATATGCTTTCAGAAGCTATCATGACTTGCTTGATGGATTGGGATATTGACCGTAAATTGTTCTCCATGATATT GGATAGTTGTTCTACCTGTGATAACATTGCTGCTAGAATCGGTGAGAGACTTCTGCAAAACAGGTTTCTTTATTGTAACG GTCAGTTATTTGACATTCGCTGTGCTGCTAATGTTCTTAATGTCATGGTTCAGCTTGCTTTGGGAGCTGTGAGTGAAGTT GTAAATAAGATTCGAGAAACTATTCATTATATTAAAAGTTCACAAACTACACTGGCAAAGTTCAATGAGATGGCTAAAGA AGTTGGGATCCTCAGTCAAAAGTGCCTACTTCTAGATAATGCATTGCAATGGAATTCTACATATTCAATGCTTGAAGTTG TCTTAGAATACAAGGATGTTTTTATTCTTTTGCAAGAAAATGATACTTCCTATAGAATCTGTTTAACTGATGTAGAGTGG GAGAGAATCACTGCAGTTACCAGCTACTTGAAGCTTTTTGTTGAGGTTATAAATGTTTTCACCAAGAGCAAGTATCCAAC TGCAAATATTTATTTCCCTGAGCTCTGTGATGTTAAGTTGCATTTGATTGAATGGTGCAAGAACTCTGATGAGTATGTCA GTTCTTTGGCGTTAAAGTTGAGAAGCAAGTTTGATGAGTATTGGGAGAAATGCAGCTTAGGGTTGGCAGTTGCTGCCATG TTAGACCCTAGGTTCAAGATGAAGCTGGTAGATTATTATTATCCACAAATCTATGGTAGCTCATCTGCCGGTCGCATTGA AGAGGTCTTTGAGGGTGTGAAGGCTCTGTACAATGAACATTCTATAGGCTCCCCATTAGCTTGCCATGATCAAGGTTTAG CCTGGCAAGTCAGTAATGGTCAACTTTGCTTGCCAAGTTCTGCAAAGGATTCCAGGGATAGACTGATGGGATTTGACAAA TTCCTCCATGAAACTTCTCAAGGTGAAGGTGCAAAATCAGATCTAGACAAGTACTTAGAAGAACCTCTCTTTCCACGTAA TGTTGATTTCAACATATTAAATTGGTGGAGAGTTCACACTCCCAGGTATCCTGTCTTATCCATGATGGCACGAAATGTTT TAGGGATTCCAATGTCAAAAGTCCCACCCGAGTTGGCATTTAACTATAGCGGAAGAGTCCTTGATCGTGATTGGAGCTCA CTTAATCCAGCAACTGTCCAAGCTTTGGTGTGTTCACAAGATTGGATTAGGAGTGAACTGGAAAACTAG
Protein sequence (LotjaGi6g1v0159700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDMSDAVIVKSSRLKSVVWNDFDRIKKGDTCVAVCRHCNKKLSGSSTSGTSHLRNHLIRCQRRSSHGIAQYITARDKRKE GTLAIANFNIDQDPNKDDTLSLVNIKFEQAQLKEDSVSTGTSNFDQRRSRFDLARMIILHGYPLAMVEHVGFRGFVKNLQ PLFELVTINRVEADCIEIYEKERKKMNETLDKLPGKISVSVDVWTAMGDAEYLCLTSNYIDESWQLRRRILNYIRVDSSH TEDMLSEAIMTCLMDWDIDRKLFSMILDSCSTCDNIAARIGERLLQNRFLYCNGQLFDIRCAANVLNVMVQLALGAVSEV VNKIRETIHYIKSSQTTLAKFNEMAKEVGILSQKCLLLDNALQWNSTYSMLEVVLEYKDVFILLQENDTSYRICLTDVEW ERITAVTSYLKLFVEVINVFTKSKYPTANIYFPELCDVKLHLIEWCKNSDEYVSSLALKLRSKFDEYWEKCSLGLAVAAM LDPRFKMKLVDYYYPQIYGSSSAGRIEEVFEGVKALYNEHSIGSPLACHDQGLAWQVSNGQLCLPSSAKDSRDRLMGFDK FLHETSQGEGAKSDLDKYLEEPLFPRNVDFNILNWWRVHTPRYPVLSMMARNVLGIPMSKVPPELAFNYSGRVLDRDWSS LNPATVQALVCSQDWIRSELEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 661 | 658 | 1.4E-299 | – | |
| PANTHER | 4 | 661 | 658 | 1.4E-299 | – | |
| ProSiteProfiles | 13 | 66 | 54 | 10.491 | ||
| SMART | 13 | 63 | 51 | 1.4E-17 | ||
| Pfam | 16 | 59 | 44 | 1.1E-7 | ||
| SUPERFAMILY | 16 | 62 | 47 | 4.64E-7 | ||
| SUPERFAMILY | 185 | 658 | 474 | 6.6E-74 | ||
| Pfam | 422 | 520 | 99 | 9.1E-29 | ||
| Pfam | 574 | 656 | 83 | 3.4E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi6g1v0159700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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