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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0161700 |
| Transcript ID | LotjaGi6g1v0161700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trichome birefringence-like protein; TAIR: AT2G30900.1 TRICHOME BIREFRINGENCE-LIKE 43; Swiss-Prot: sp|Q6DR10|TBL43_ARATH Protein trichome birefringence-like 43; TrEMBL-Plants: tr|I3TAR2|I3TAR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0161700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44535419..44542936) extracted from Lotus japonicus Gifu genome v1.2.
TTAATGCTTTAATGGTCACTTATGATGTTAAACCATGTTTTTTATTTGTTATCGGTAGATAAAACTTAATTTTTATTTAT ATTTCACTCTTTTATGATGTCACTAACTAGATGAGTTGTATCTTTCATTTTTTTTTGTCTTATATTTATTTCATCTTTGT GCTTTTCTTATCCTCTCATCAAAATGACAAATTCAAGCTATAAAAAGGATAGAGAAGGTAACAAGTAATAACTAAGATGA GTAGTGATGTCATGAGAAAAGAAGAGACTAAGAGAGAAATATGTAAGTGTAGTATTGTTGTGTGAAACCCAGAGTTGCTA TTTTGTTTGTTTGTGACTCACATTTGCATGATTCATGAATCAATCGTAATTAAAACAAAAAAACCACACAAAAAAATTTG CAAACCGCTTTTGGCAGGTACCAACACCACCACACAGATTTATATATGACACTCCAAACCCAATTACAACAACAGGAGGA AATCAAACACACCACACATATTGTGATCAGCTCCTCCACCATCACCATGAGGATGAGGTCTCTCACCACCATCTCTGCTG TCTTGTTCCTTGCTCTTCTCATTCAGATTCATGGGAAGGATGATCATGATGTTAATTACCAGAAGCAGTTAACAGCAGGG TTTGGAAAGAGTGGTTGTGATTTGTTTGAGGGAAGATGGGTTTATGATGAATCATATCCTCTTTATGATTCCTCACGCTG TCCCTTTTTTGAGCAGCAGTTTGATTGCCAAAAGAATGGAAGACCAGATAAATTCTATCTAAAGTATAGATGGCAGCCAA CAGGGTGCAACTTACCAAGGTACATGCATATCCTCTGTTTACTCTGTTTTCATTTTTCATTGAATAAACTATTTTATTTT GCCATTTTGGACATAGATACATGGTTTTTGCTGGTGTATGCTGCTTTTTTATTTTCTTTTTTCCTTTCCCAAAATTAGTC TTTTCTGACATTTGTTACCGGTTACTTTGATCCATTCCGCCTAGTTTATCTAGGCTCTGGTGTTTGCGAGTTGAATTTTG GAGATGAGAAGATTATGAGAAACCCTTCCATTGTTTGAGAATTTTACTAACCCTTCCATTCTATTGAGTTCCCCAAATTA AATTAAGTGTTTATGTGAAATTTTGACTTTTTGAACGACTGGAGAGAAAAAGACAAAGCCTTAGTAACTGCTTGTTGTTT TGATTTCTGATATGGAAAAAGACAATGCCAATTGTAAGTTACAAATGAGAGAAAGACAAATCCATTGATATGGAGTACAT GAAATCCTTGGGATTGAGAACTTCTCATGGGAAAAATGATTTCTTTCCCGCCCTTTTTTTCTTTTGAAATTTACCAAAAC CATTGAAATGGTCTTACTAAATTGCAGTTACTATATTTTGTTGGTTCCTAAGTCTTAACTTAAATCGCATGTCTAGGATG GTCATTTTATTGATAACTATAAAACACTCATTCAGTCACAAGTAGAGCCAATAGATTATTTTTTTGAACATGCCTTCAAT CCTCACCTGAAAAATAAAAAACAGAATTTAGTACATGAATTTCTAAACAACTTAGTTCCTTAATTCTCATATTCTTTCCA TCTCATTTTCACTCATTTTTTCTTAGAGCTCTTAAAATAGGCAAACCCGACCCATCCAAACTGGTAACAATAGGTTATGA GGAAAGGAGTTTGAGATGTCCTGACTTTTTTTTTGGTGAGCCAAAAAAAAAACCTAACTTAACCCACTACAAATTGGCTG GTGAGATTTATAATAAGCGAAATGAAAAAATAGATTTTTTTTAATTAGAAGAGGGTTTATAATAATAAACTTCTAATAAT AAGCATCCAATAAATTTAACTTTTTAATACCATAATACTAGTTATCATCGCAACATTCTATTGAAGTTTTCAAAAAAAAA AATTCTATATATAGAAAAATGTTGGGTTCACGAGCTAGTCAGTGCGAGTCGTTTAACCCGTGGATTCAATCTAATTAGTG AGTATGTGAGCTAGATTTTGACCAACTTAACCCACCAACAAGTTGAGTTTACTCACGGGTTGTGAGATAAATAGTCAATT CTATTTTTTCATTTTATAACTCTTCTCTTTTCTCATCATACCTCTTTTCTCACCATTCTATTTTTATGTTTCTATTGAGT GCAATTGGAATGAGTGTGATCAAATAATATTCCATTTCAAAATTTATGGGAAATTAGAGCTTGAGAGGAAGTATCTATAA CCGGTATTTTGATTTGAGGAAACCCCACGTAAATGCTTATGCTCTAGAAATTTTAGGACTCAATCTAATCCATGAAAGGT ACCCACCAACAACCAATTAATAATTGCTCTTTATACGTCTAAATTAAAAGAGCTTTTGTCACGTAATAACATTCTGGTGG AAAACAATACTACACATATAACATTAAATTCAATGTGATATCTGAAGAAGACTTAATAACATGTTAGAGACACAGTTGTA TATTAGATCCTATCATGACATGTTACTATGTTAGAGATTATATATAACTTTTTTTTGAAACTGAGATTATATATAACTTT GTTCGTTTGCTAATTTTTTTCTCTCTCTCTCTCTCTCAACATATATATTAAAATGAGATAAATATTAAATTTAATAAATA TCACTTACTCTCCCGATTAAGACACCTACTTGAGGACCCTTTTATTTCTCTGCTGCTATTTACAACTGTTATAACTTCTT TTCTTTTCTTTTAATTTTGTTATTTAATTTTTGTAATTCTGTGACAAATTAAATTATTTGACCAAATTATCTTTTTCAAT TGGTGATTTTGTTTGGGTTGAAAATGTTCCAGTAGAACTTATTTACTTAGCTTGATCATGGGGATAAAATGTAAAAGAAT ATTTTTTTGAGTAATTATTATTTCTACAACTCCCCCCCCCCCCCTCCCATATAGCTAACTTTATCAGTGTCTCACTTCTT TCTCATGATGGGCATATTTGTCCTTATTTTGTGAAATAATCATTATTTAGTTTTAAAAACTAATACCTTATGTATTTTTA AATTGTATGTGTGTTTATGATAGAAAGTGGGATTTAAAAAGAAGAAGCTGAAATCTGATAATTCTTGTACGCTATTTTTA ATAGTTTTGAAAATCAATTATTTTGAATAGGTTTTTAAAGTAAATAACAATTTCTATATTTATACACAAACATAAATTAA TAATTTCTTTTCAAACTATCTCTTAAAACAAAATTAATTTTCTTTTCATCTTTTTTTCCTCCTAATAATGATTATTCCTT TCATATAATGTTAGAAGATCTAATTAGGAACTCACATATTTTCTTAAAAATTGGATTAGACCAAACTCTACCTCAAAAAC TAGCTTAAAGATGATGATTGCTTTACAATGAATAAAAATATTTTTAGCCATATAAATGTACTATATAGTGAATGTGAGAC CTTAACATATTTTTCATTCATTTGCTGTCACTCGACAAATATCATTTTACTGATTTAATGTTTTACCCCCAAATGACACC ACAACAAACAAAGGAAAGAAGCAAATTGTAAACAAACAAAAAAGAAAAGGAAAGAAGCAAATTAAAAAGAAACAAACACT TCCTTTATCTGAAAAAAGGCTAGACTTGGTAGAAAGCTAGATAAAGCATTAACCAAACCGGACACGGACATTTCCAAAAT ATATAAGGTGCAAGGTATATTTTCTATTTAATAGCCTTCCCCATGTATGCTTCACTCAACCACAAATCAGTTAAAGAATA ACATTGGTTATGCTTTGTTAACCTCTGTTTGATAAAATACATTAGGCTTTGTCTGGACACTTTACATCTCTTAGTTGTTT TCTGCACTCTCCTTCCAAGTTGTCACTCACCAAACGATTAGGTGAGGTTGCTAGTTAGGCTTATACATATACATTTGAAC TACCACATAAAGTTTATGTGTATGCATATGTCGGCAGTGACTTCCTTCATCTGTTAATGTAAAGTTACATTCAATCATTT TGTCCTGAAATAGGATCACATGCTATATTACATCCCAACAAAAGATAGTTTAAATGATCATTAATTTCGAATGAACATTT TGCACCGAAAAATCTGAAGTGTTATAGGAGCATGTACTATATACTCATTTTCATTAAAATGTTAATTGTTATAGTTGATA TGTTTGGAAGAACTTATTTGAGTTTATCTTATAGTATGAACGCTTATGCAAGCAAGTGTTTGTCAGAACTCAGAACTTAT GTGAATAGTTAGCCAACGTATAAATTGTTTTGAGTTTATAAATAAGAGTTTATGCTTGTTCATAATATATTCTCACATGA TTTCATTAAGTTACTTAAATTAGCTTATGAATAAGCACTTATGCGATAAATGCTTATATTTGAAAGCGCTTAATTAAATT ATTTACCCAAACACACCCTAATTTTGCTTGAAGTTTATGCTCTTTAGATGAAGACATATAAATGATTTTATATATATTAT ATTTCTAATACGTCATCTCATGCAAAACTTAATTAAGCTTGAAGTGTGGACAATACAACCCACTAATTTTGTGCTGAAAG TCAACTTTATATTAGTATAATGAGGTAATAAGGGTCGAAATATAAACCACTATCTCATCAAGACTCCTAAACTATGTCAC GAATCAACTATCCCAAAAAATTGAGCGATTAGATAAAAACACATAAATGATTTCTTACACAATATTATCAACCATGTACT GTTATTTATTTCCATTTTAATTTTTTTTGAAGAAAAAAAGTGTAAAAACTGTTTTCAGATAATTATAAGAAGAGGGAGTA TGACTGTTGAGTATTATGTGAGCATTGAAAACTTGCTCTCATTGTACAGATTCAATGGTGAAGATTTCTTAAGAAGATAC AGAGGGAAGAGTATCATGTTTGTGGGGGATTCTTTGAGTTTGAATCAATGGCAATCACTCACTTGCATGCTCCACACAGC TGTGCCTCAAGCTCAATACACCTTAGTGAGGACTGGAGGTCTCTCCATTTTCACCTTCACGGTTAGATCACCTCGATCTC TGATAATGTTTTTTTTTTAATTTTCATTCCTCTTCACTTAGTCATTATTGTTTCAAATAAACATTATCACATTATTCAGC CATGTGATCAATGTGGCTGTGCTTCCCCCCTATAACTGCAAATAATTAATTTCAAAATAAGTAACATTAATTGGGTGGGG TAGCGCTAGCTAGCAACCATGCATATTGGATAATCTTGAAACTAAGTAGAGCAGTGCTGTCAAGTATAATAACAATGTAA ATGCAATCACGCAATGATATGAAAGTTGCTCCTAACAGTTGTTTTCCTTTATTAAGTGTTTGACTTTTAAGATATCAGAG ATTCCCTCAAATGCAAGCAGAAAAATATAAGCACTAACGTAGCCAACAAGTTATCCAAGGAAGGTAATACTGATAAAAAG GAATAAGTTAATGCTTTGTTGTCCATAAAAGAAAACTAATCACAAAGTTGATTGATTACCTAGACAGGTAACCCATGCTA AGTGCTAACTGATCAACATATTTTTTATTATTGCATAACTGTATTGCTAAGAAATGAATATTAACTGAACAAGTCTTATC TGTTAAGTTATTTCACATCATTGTCAACATAGGAAAACTAGTTCAACTGATAATATACTGTTTGTAATGGTGAAACAAGT CTTGCTTTATATAGTAAGGGAAGAGAGAGGCCAAGACTATATGTTGGCCCAACTTCTTTGTTTCATAGCTCTCTAAAGTT GTTTATTTCTTAGTACTTGTTATAGTGTCGGGAGATGTAGTTCAAATATTTACTTTGCAGTGTGCATGTGCATGAGCTGT GGTTTTTCTCAAATTTGCAGACCTATGGCGTTAAGCTGATGTTTTCACGCAATGCATACCTAGTGGACATTGTTGGTGAA CCTATTGGTCGAGTGATGAAACTAGATTCTATTGAAGCCGGCAAAACCTGGAAAGGAAAGGATGTATTGATATTTGACTC TTGGCATTGGTGGCTTCACACAGGAAGAAAACAAGCGTATGTATATATAGCCACACACACTCTTCAATTATAACAATTTT CTTTCAAAAAAATTATAACAATTTTCTTTCTCTTATGCAGATGGGATTTCATTCAAGAAGGGAATAAACCATTAGTCAGA GACATGAATCGGTTAGTTGTATATGAGAAAGCATTGAATACATGGGCAAAATGGGTTAATGCCAATATTGATCCTACCAA AACAAGGGTACTCTTCCAAGGAGTTTCTCCAGATCATGCAAATGCAGGGCAATGGGGAGAGCCAGGAGCAAATTCTTGTG TAGGGCAAAGTAGGCCATTGTTGGGATTCAACTATCCAGGAGGTCCACACCCAGCAGAGTTGGTATTAGAGAAAGTGTTA GGAACCATGAAAAAACCAGTGTATTTGCTCAACATTACTACCCTATCACAGCTGAGGAAAGATGCTCACCCTTCTGTTTA TGGAGCTGGAGGGCATAGGAATGCTGATTGCAGCCACTGGTGCTTAGCTGGTGTTCCTGATACTTGGAACCAGCTTTTAT ATGCAACTCTCATTCAAAATTAAGTGCTTATTCCTAGATCAAGCAATGAAACAAATAAAAGTATTTATAGGCCAAATAAA AGAAGATATCTCTTCTCATATTTTAAATTGGAATGATTCATTGGACTAGAAAAAATGTTACATATGATATGGTAAAGAAA GTTCATATATATATGATTTTGTGGCTTTTAACATGAAAAATATACACTGCTTCTATAGTATTACTACTACTACTTCCATT AACACTGGCAACTGTTATTTTATAGTTAGTTTTTCTCATTTTATTCATTTTTTAAATAAAAAACAAAACAACAAATATGG TGCTTGTTTTGCTCGATAAGTACAACTTGCTTCTCGGGTCGTGTTGGTGAACTGGAATCCAAGCTCCGATTTGTGGAATG GTGGGGGCCGGTCACCTGCAAAAGAGACTCTGACACTAAAATCAGTTAGAGATTGAGCAGAATACATAGTAATATTGGAT TTTGAGTTTGTACTTTGGAATTTGGATGTGCAGGGTGACACTTATTTGTAGATGGTGGAAATCATGTTGTTGTGTTTAGA TTTTATGAGATTTGTTGAAACGGATAGATCTCAGACTCAGATCAAGTGCCTGCCCTGACCTAAGTGGGGTATCAAGTGTC TGGTCCAAGTGAGGAAGAGGCTAAGGAGACAGCAATATGGGCCTAGAGTTTAGTCAGTAATAGTTGCCTCAGCTAAGAAT GGATATGAGGGAACCCAAATTCATACAAGCTCGCTTTTTCAGATGGATTTGAAGACAATCCTTCTCTAGACAATATTTAG GATCTTCTAGCATATACACCAAAAGTTGATGCTTGAAAGAATAGAATGAGTCCTTATTTATAGCAACAGTTAGCCACTTA GCCGCTATTGTTATGGACTGTGTGTACAAAGCTAAGGTACCTCATGTGTCAAACAGATAAAGCTAGAAGCAGAGAAAC
CDS sequence (LotjaGi6g1v0161700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACTCCAAACCCAATTACAACAACAGGAGGAAATCAAACACACCACACATATTGTGATCAGCTCCTCCACCATCAC CATGAGGATGAGGTCTCTCACCACCATCTCTGCTGTCTTGTTCCTTGCTCTTCTCATTCAGATTCATGGGAAGGATGATC ATGATGTTAATTACCAGAAGCAGTTAACAGCAGGGTTTGGAAAGAGTGGTTGTGATTTGTTTGAGGGAAGATGGGTTTAT GATGAATCATATCCTCTTTATGATTCCTCACGCTGTCCCTTTTTTGAGCAGCAGTTTGATTGCCAAAAGAATGGAAGACC AGATAAATTCTATCTAAAGTATAGATGGCAGCCAACAGGGTGCAACTTACCAAGATTCAATGGTGAAGATTTCTTAAGAA GATACAGAGGGAAGAGTATCATGTTTGTGGGGGATTCTTTGAGTTTGAATCAATGGCAATCACTCACTTGCATGCTCCAC ACAGCTGTGCCTCAAGCTCAATACACCTTAGTGAGGACTGGAGGTCTCTCCATTTTCACCTTCACGACCTATGGCGTTAA GCTGATGTTTTCACGCAATGCATACCTAGTGGACATTGTTGGTGAACCTATTGGTCGAGTGATGAAACTAGATTCTATTG AAGCCGGCAAAACCTGGAAAGGAAAGGATGTATTGATATTTGACTCTTGGCATTGGTGGCTTCACACAGGAAGAAAACAA GCATGGGATTTCATTCAAGAAGGGAATAAACCATTAGTCAGAGACATGAATCGGTTAGTTGTATATGAGAAAGCATTGAA TACATGGGCAAAATGGGTTAATGCCAATATTGATCCTACCAAAACAAGGGTACTCTTCCAAGGAGTTTCTCCAGATCATG CAAATGCAGGGCAATGGGGAGAGCCAGGAGCAAATTCTTGTGTAGGGCAAAGTAGGCCATTGTTGGGATTCAACTATCCA GGAGGTCCACACCCAGCAGAGTTGGTATTAGAGAAAGTGTTAGGAACCATGAAAAAACCAGTGTATTTGCTCAACATTAC TACCCTATCACAGCTGAGGAAAGATGCTCACCCTTCTGTTTATGGAGCTGGAGGGCATAGGAATGCTGATTGCAGCCACT GGTGCTTAGCTGGTGTTCCTGATACTTGGAACCAGCTTTTATATGCAACTCTCATTCAAAATTAA
Protein sequence (LotjaGi6g1v0161700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLQTQLQQQEEIKHTTHIVISSSTITMRMRSLTTISAVLFLALLIQIHGKDDHDVNYQKQLTAGFGKSGCDLFEGRWVY DESYPLYDSSRCPFFEQQFDCQKNGRPDKFYLKYRWQPTGCNLPRFNGEDFLRRYRGKSIMFVGDSLSLNQWQSLTCMLH TAVPQAQYTLVRTGGLSIFTFTTYGVKLMFSRNAYLVDIVGEPIGRVMKLDSIEAGKTWKGKDVLIFDSWHWWLHTGRKQ AWDFIQEGNKPLVRDMNRLVVYEKALNTWAKWVNANIDPTKTRVLFQGVSPDHANAGQWGEPGANSCVGQSRPLLGFNYP GGPHPAELVLEKVLGTMKKPVYLLNITTLSQLRKDAHPSVYGAGGHRNADCSHWCLAGVPDTWNQLLYATLIQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 32 | 50 | 19 | - | – | |
| PANTHER | 35 | 392 | 358 | 1.6E-181 | – | |
| PANTHER | 35 | 392 | 358 | 1.6E-181 | ||
| Phobius | 51 | 394 | 344 | - | – | |
| Pfam | 70 | 122 | 53 | 1.2E-23 | ||
| Pfam | 123 | 389 | 267 | 2.1E-89 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0161700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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