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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0166200 |
| Transcript ID | LotjaGi6g1v0166200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Folate/biopterin transporter; TAIR: AT5G54860.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8RWQ5|FBT4_ARATH Probable folate-biopterin transporter 4; TrEMBL-Plants: tr|I1KY57|I1KY57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0166200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45021320..45025375) extracted from Lotus japonicus Gifu genome v1.2.
CTTCCACATTGTCGAAACCGTTGGGAGGGAAACTCGAAACTGTTCTCTGTTGTGACCATACTCCTTCTCCAAAACCAACA ATGGAATCAGCAACTTCATAGTCAGAACAAAGTGACAGACAGAGAGTAATAGAAACAGAAGGGTTTTGAAATCTCTGTGT TTTTGTTTTGTTTTGTTTTATCGACAATGATCGAATGGACGAAGCGATTGAACGCTGCATTTGGGGCTTCATTTCTTTGG CTGATTTGCTTGGTTTACTTCACCCAGGTTTCAATTCTTCACATTTTCTTCATTTTCATGTGGGTTTTTGTTTTCCTTCG AGATCTGATAGTTTCTTATTGGTTTTGTCAAATTAGGTGTTGAATGTTGTTGATCAATTCATGGTCCTTTTTTATACATA AATGTTTTATGTATTTTTCAGCTGTTATTAGATTGTTTTTGTGGCATGCTGAATTGATAATCATGGTTATGCCTTCATTG ACTCAATTACTCTGTTAATGCAGGGTTTTAGGTCCTTTGTCTGGACATCAATTTCCTACCAGCTTAAGGATAATCTTAAG TTGTCACCTTCAGCTTCCCAATTTGTGATTTCAGTAGCATTTTTTCCATGGAGCATCAAACCATTATATGGGTATGGATA ATTGAATTGAATTGATTTTTTATTCTTTTTGCAATTGAGTGTCCACACATATAAACACTTCCATACATGCATATAAAACT AACATATCTTAATGTAGATATGTGATTGTAGATTTGCAAACTATATGAATATGAATAATTTTTTTATTGTGATTATGGTC TATGATTTTGTTTATTAGTTTAAAACATGAGAGTGGCAATGATTCTATGGTCTGTTGTTAGTTTTCTTGACACCTACCGA GAATATATAACATATTATGATTCTATTATGTTCAATGCTTATGTTTCTAAGCTGCATAAACATAAATTTTAGTAATGCTT ATGAATATCTTCCGAACCTACTGAACTGTGTTAACAATTGGAAGCTTCAGCATTTTTGTGGGTTTTGTGTATATTTGTAT CTGTCTGTTTACTACAATTTCACACTACTTCATTGCAATCTGATTTGATTATTGATGAGCAGAATAATTTCTGATTGTAT CCCAATCAAAGGAAGAAAACGGGTTCCCTACTTAGTGATTGCAACTGTGCTCTCCCTTGTGCCATGGTTGATTTTAGGCT TAAATTCAACATTGAGGGATTCAACAGGGCACCTAATGGTATTTTTGACTGTGCAAAACTTGGGCTCGGCCATGGCAGAT GTTGTTGTTGACGCAATGATAGCGGAGGCAGTAAGAGATGACAAGTAAGTTTGCATCTTCAGTTCCTTATATTCATATTC TGCTGACAAAACCCTGCATATAGATATTTTTAATAATGCAAAAGTTTGGGATCTTATATTGGAATAATAATTAAGAAAAT CTGAAGAAAAATGCAGAAACACTAAACGTTGCAATTGTAGTTGCAGTTTATGAGCTTTTGTACATTTGCTCTATCTTCAC AACAAAAGTAAAAGTTGAATTCAAATAATGGGATCCAGTGGCATACATGTTAGTGCTTGATAGTTGAAAAAGAGAAGGTA AGAAATTTTAAGAAAGGATGGGAAATGGAGTTGAGAGAGAGTAGCATGACTCGTAAATAACAATAAAAGTTTGTTCTGTT ATTTTTGCGTTTTCCAAGTTTAACATTTTGTGAGACTCATTTACTAATTCCATGCACCTTGTTCTGGCTCGAATTTACAA GACTTCGTAAGATAATATTTTGTTTTAATGTGATTCTTACATGCCACCCTTCTCACTAGATGAATAAGTTCAATTCAATT TGTTCTTTTTGTAATAACGGACTTTCAATCTCTCAATAGAATGGACTAATGAAGGTAGTTTTCAAGACGAAAACTGGATG GGTTAACTTTTCAACTTTTGTTGATAACCCTTGTAACTTAGACTTATTTCAGCTATTATATCCACATATAAGGTTTGGCC TGGATAAAATTAACCTTACTGAATCTTCTATGATGGATATCTTTCTTGGCATTAGCTAATGGCTATATGTTGCATTGGTG TCTAACATTTGTCTCAGACCCTGGACCCTGTATGTAGTTCATGCTATCTTTTGCAGAATGCTTTTTCTTATACTCTCGGA TTAAGTACTGCCTTTTGTTGGTCAGGGCTTCATATGCAGGCGACCTCCAATCAATATCTTGGTCTGCAATGGCTTTGGGA GGGATATGTGGGAGTTTGTCAGGGGGGTTTGCATTATCCAATTTACGGATGGATGCTATTTTTCTTCTATTTTCTGTGCT GCCTTGCATGCAGTTGTTATCATGCTGGTTTGTGGAGGAGAGCTCTGTAAATAGCAAAGTTTTACCAGAGGATTCTATTG ATTCACATACGAATGATAGTAGTAGTATCCCAGATGAAGATAGTCCTTTAACCAAAAAGTCCCACAAGAGTACAAGAAGA AGAAAGAACGGCAAAAAGAACAAGAAAAATAAAGCAGTAAATACCAGCAAACCCAAAAAATTTGAGAAAGGAGATTCCAT GGCATTAAAGTGGTTCCATTCTTTGAAAGATGCAATTTATGATTTGTGCCGTGCGTTTAAACAGCCAACGATTTGGAGGT AACTAAAGTAGTCTTTAAAGATTTTCTATTCTGTGTATATTTTCAATGACAGAGTGTAGCTTATTCACTTAATGCGCTCA TATGCTATAAACTGTTATTAACAATCTTTCTTTGGGATGGCAGACCTATGACTTGGTTTTTCCTTGCCCACATTACTCTT CCCGATCTTTCAACAGTCATTTTCTACTATGAAACCGAGGTTCTGAAGCTGGAAGCGTCTTTTCTCGGGACTGCCCGGGT TGTTGGGTGGTCAGGACTTATGCTGGGCACCTTTATTTATAATCGCCACCTGAAGTATATGACCCTAAGAAAAATTCTCA TGTAAGCAATTAAAGAATATTTTTCATTAGTGTCTGTGTATGGTTAACTTGTGCATGTTCAATTTACTGATATGTTCTCA TCATGATTTCAGGTGTGCCCATATTGGGTTGGTCTTCTTGAATCTTCTGCAGATGGCTGTAGTGTCTAGGAAAAATATTG CCTTTGGAGTATCTGACAGGGTTATGGTGCTCTTTAGCTCGGCTCTTGCTTTTGGAGTCAATCAATTCAAGTTTGTCATT ACTTCTCTCTTCAGTTTCTGTTATTTACTAAGTATTTTTAATTAAAGATGTGCATGGCAAGATAGGTGAAAACATTTCCA AGAAAAACATAAATGTTTTCAAGTAAAGTTTGTTACTTTATCGAATTTCCGTGCCATCTTCATCTCAAAATAGAGATGAA AAACATTTGATATTGATGGCATGTACTTCATTTTCATTACATAGTAATCTTTTGCATTCCATTAAATTTTGGTGTGCCAT TGGCACCTACATTTGTGCTTTTGAGCTTTTGTTTCTGGAAACACAATGATTTGAACCACTTTTTATATTTACATCCTAAG TTCCTATTCTTTAGCTGATTATTATTTTGTATTTTGGGAAAAACTGCAGGTTTATGCCTTTCCTGATCTTATCTGGACAA CTATGTCCTCCTGGGATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAATTTGGGGTCAACAGTGGGGTCTTT TGTGGGTGCTGGCTTGGCTTCTATATTGAACATTGATTCAGGATCATTTGACAATCTTCTATTGGGCATCACCATTCAAA CCTTGTGCTATTGCATTCCAGTTGCTTTTCTGTTTCTGATACCAAAAGAAGCTACAGGTGTAGCAGCATAGGTTACGAGT TAATGACTACAATTGAGATTGACTTCAGTTACATTAGTTTTTTCTAGGTCCATCACAGCTGGTATTTTACACTTGTAAAC GGGAAATGAGGATTATATAAATCTGGTTTATACAATTCTCTTTTGATAATCACAAAATTATTATACTGATTGTATATACT CTTGTAGCAACAATTTTGGTCAGCAAGTCACTTTTTACACATCATTATCTTCAAAA
CDS sequence (LotjaGi6g1v0166200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCGAATGGACGAAGCGATTGAACGCTGCATTTGGGGCTTCATTTCTTTGGCTGATTTGCTTGGTTTACTTCACCCA GGGTTTTAGGTCCTTTGTCTGGACATCAATTTCCTACCAGCTTAAGGATAATCTTAAGTTGTCACCTTCAGCTTCCCAAT TTGTGATTTCAGTAGCATTTTTTCCATGGAGCATCAAACCATTATATGGAATAATTTCTGATTGTATCCCAATCAAAGGA AGAAAACGGGTTCCCTACTTAGTGATTGCAACTGTGCTCTCCCTTGTGCCATGGTTGATTTTAGGCTTAAATTCAACATT GAGGGATTCAACAGGGCACCTAATGGTATTTTTGACTGTGCAAAACTTGGGCTCGGCCATGGCAGATGTTGTTGTTGACG CAATGATAGCGGAGGCAGTAAGAGATGACAAGGCTTCATATGCAGGCGACCTCCAATCAATATCTTGGTCTGCAATGGCT TTGGGAGGGATATGTGGGAGTTTGTCAGGGGGGTTTGCATTATCCAATTTACGGATGGATGCTATTTTTCTTCTATTTTC TGTGCTGCCTTGCATGCAGTTGTTATCATGCTGGTTTGTGGAGGAGAGCTCTGTAAATAGCAAAGTTTTACCAGAGGATT CTATTGATTCACATACGAATGATAGTAGTAGTATCCCAGATGAAGATAGTCCTTTAACCAAAAAGTCCCACAAGAGTACA AGAAGAAGAAAGAACGGCAAAAAGAACAAGAAAAATAAAGCAGTAAATACCAGCAAACCCAAAAAATTTGAGAAAGGAGA TTCCATGGCATTAAAGTGGTTCCATTCTTTGAAAGATGCAATTTATGATTTGTGCCGTGCGTTTAAACAGCCAACGATTT GGAGACCTATGACTTGGTTTTTCCTTGCCCACATTACTCTTCCCGATCTTTCAACAGTCATTTTCTACTATGAAACCGAG GTTCTGAAGCTGGAAGCGTCTTTTCTCGGGACTGCCCGGGTTGTTGGGTGGTCAGGACTTATGCTGGGCACCTTTATTTA TAATCGCCACCTGAAGTATATGACCCTAAGAAAAATTCTCATGTGTGCCCATATTGGGTTGGTCTTCTTGAATCTTCTGC AGATGGCTGTAGTGTCTAGGAAAAATATTGCCTTTGGAGTATCTGACAGGGTTATGGTGCTCTTTAGCTCGGCTCTTGCT TTTGGAGTCAATCAATTCAAGTTTGTCATTACTTCTCTCTTCAGTTTCTGTTATTTACTAAGTATTTTTAATTAA
Protein sequence (LotjaGi6g1v0166200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIEWTKRLNAAFGASFLWLICLVYFTQGFRSFVWTSISYQLKDNLKLSPSASQFVISVAFFPWSIKPLYGIISDCIPIKG RKRVPYLVIATVLSLVPWLILGLNSTLRDSTGHLMVFLTVQNLGSAMADVVVDAMIAEAVRDDKASYAGDLQSISWSAMA LGGICGSLSGGFALSNLRMDAIFLLFSVLPCMQLLSCWFVEESSVNSKVLPEDSIDSHTNDSSSIPDEDSPLTKKSHKST RRRKNGKKNKKNKAVNTSKPKKFEKGDSMALKWFHSLKDAIYDLCRAFKQPTIWRPMTWFFLAHITLPDLSTVIFYYETE VLKLEASFLGTARVVGWSGLMLGTFIYNRHLKYMTLRKILMCAHIGLVFLNLLQMAVVSRKNIAFGVSDRVMVLFSSALA FGVNQFKFVITSLFSFCYLLSIFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 409 | 406 | 1.1E-198 | ||
| PANTHER | 4 | 409 | 406 | 1.1E-198 | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| SUPERFAMILY | 14 | 411 | 398 | 3.01E-29 | ||
| CDD | 18 | 408 | 391 | 2.16233E-89 | – | |
| Pfam | 27 | 408 | 382 | 6.0E-50 | ||
| Phobius | 35 | 53 | 19 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 54 | 72 | 19 | - | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 84 | 101 | 18 | - | – | |
| Phobius | 102 | 112 | 11 | - | – | |
| Phobius | 113 | 132 | 20 | - | – | |
| Phobius | 133 | 152 | 20 | - | – | |
| Phobius | 153 | 175 | 23 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 176 | 180 | 5 | - | – | |
| Phobius | 181 | 200 | 20 | - | – | |
| Phobius | 201 | 298 | 98 | - | – | |
| MobiDBLite | 211 | 227 | 17 | - | – | |
| MobiDBLite | 211 | 261 | 51 | - | – | |
| MobiDBLite | 236 | 256 | 21 | - | – | |
| TMHMM | 297 | 319 | 23 | - | – | |
| Phobius | 299 | 317 | 19 | - | – | |
| Phobius | 318 | 328 | 11 | - | – | |
| TMHMM | 329 | 346 | 18 | - | – | |
| Phobius | 329 | 347 | 19 | - | – | |
| Phobius | 348 | 358 | 11 | - | – | |
| TMHMM | 359 | 378 | 20 | - | – | |
| Phobius | 359 | 378 | 20 | - | – | |
| Phobius | 379 | 397 | 19 | - | – | |
| Phobius | 398 | 420 | 23 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 421 | 424 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0166200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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