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LotjaGi6g1v0166700.2

Overview

Field Value
Gene ID LotjaGi6g1v0166700
Transcript ID LotjaGi6g1v0166700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Purple acid phosphatase; TAIR: AT3G20500.1 purple acid phosphatase 18; Swiss-Prot: sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18; TrEMBL-Plants: tr|A0A151T1M0|A0A151T1M0_CAJCA Purple acid phosphatase; Found in the gene: LotjaGi6g1v0166700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:45086250..45088153) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTAACACAAGGGAACCATGAAGTGGAGAACATACCCTTGTTAAAGGATGGTTTTATAGCCTATAACTCAAGATGGAA AATGCCATTTGAGGAAAGCGGATCAAGTTCAAATCTCTATTATTCTTTTGAAGTTGCTGGTGTTCACATTATCATGCTTG GCTCCTATGCAGATTATGATCAGTACTCAGACCAATATAGATGGCTAAAGGTTAGTCACATTTCCGTGTGCGCGTGGGGC TATTGGGGGGGGGGGGGCTTGGTTGTTCCAATTGCTTAGCACTTCGATGTCACAAATTTGAACTATGCTTGCTTTCAACA ATATCTTGAAAGAGGATGTATCTTGCATTCAAAATACTAACTTACATGAGAAGCAAATATTGCTATTGGACATAAATAGC TGCAATTAGAACTGGCAACAATAGAGAAACAGAACATCAAATTGGGTTTTATGACTTTTATCCATATTCTTGATGCCTTC ATAGTTCATACAATGATACATTATATTTCCTTTCTACTGTCATGTTGTCCTAAGTTCTTGTTTCTATTTTTCTTCATTTG TTTTGTTATAGTTTTTACAAATCACAATGAAGTCCAATAATCTATGTGGCCTACCACATCTGCTGAGATAAGGTTTAGGT GTTCTCTCATGCCTTATCTTGTTACATATATTTACAATACTATGATTAGCATCACAATTGCTCCTTCCTTCCCTTAGTAA GGTGATTACACTTACTCATGATGTCTAAGTTATTTTGAAGTGTACAATCCTTGGTAACAGATGCATGCATTGCATTTGTA TATGGCTTGGGCGAATCACAAACTTAAAATTAGCCCGGACTCATGTTTTAACTCAGAAATTAGAAATCTTAAACAATGAA GTTGAAATATTTACACATTATGACATTTCATATTTAGTATGTACATGGGTGTTCTGCTCCGACTGCTCGTATTAAGATTA ATGTTATAATAATTTTAATCTTTTTATTTGATCTCAGTCTTTCAGTCATAAATTTATACATAGCATCTTACAATTTCACT CGAATCCTTCCGTGTCCTTGGCTTTCCTCTCTTGCTTAATTGTTTTATGTCCACTGGTTTATGTTCTTGTCTGTGATCTA CAGGGTGATCTGTTAAAGGTGGACAGGAAAAGAACACCTTGGTTGGTTGTGCTATTTCATGTCCCATGGTATAACAGTAA CACAGCCCATCAAGGCGAAGGTGGTGATATGATGAAAGCTATGGAGCCATTGCTTTATGCTGCTAGCGTTGATTTAGTTC TCGCTGGTCATGTGCATGCTTATGAACGCTCTGTATGACTATTTGTTTTGGAATTTCTTCTCTTTCTAAGCGCTCTATTA TGGTATTTGAGTCTTATATAGGTCTTTGTTTGATTGACAGAAACGTGTATATAATGGAAGATTAGATCCATGTGGTGCTG TCCATATAACCATTGGTGATGGAGGGAACAGAGAAGGCTTAGCTTCTAAGTAAGTTTGGTTCTGCCATAAACATTCTGAT AAGTTTTTTCTCTGAATCATTTGTTATGCAAGAAGAGAATTTAAAAAAACTATAGAGGTGGTTTTAAATTCAAACTTTGT CATAGAGCATGCCCCTTGAATTTGCTTTTACAATTATATCAGTCCTACCATTTGTATCCTCCTCATATTATTGTTTGTTT TCAGGTATATAAATCCACCGCCAAAGTGGTCAGAATTCCGCGAAGCCAGCTTCGGTCACGGTGAGTTGAAGATTGTAAAC TCCACGCACGCCTTCTGGAGTTGGCACAGGAATGACGACGATGAGCCTGTAAAATCTGATGATATTTGGATAACCTCTAT GGTCACTTCAGGATGTGTTGATCAGAAGAGAAATGAACTTGGGCATACACTTAAGACACCCTAA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0166700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTAACACAAGGGAACCATGAAGTGGAGAACATACCCTTGTTAAAGGATGGTTTTATAGCCTATAACTCAAGATGGAA AATGCCATTTGAGGAAAGCGGATCAAGTTCAAATCTCTATTATTCTTTTGAAGTTGCTGGTGTTCACATTATCATGCTTG GCTCCTATGCAGATTATGATCAGTACTCAGACCAATATAGATGGCTAAAGGGTGATCTGTTAAAGGTGGACAGGAAAAGA ACACCTTGGTTGGTTGTGCTATTTCATGTCCCATGGTATAACAGTAACACAGCCCATCAAGGCGAAGGTGGTGATATGAT GAAAGCTATGGAGCCATTGCTTTATGCTGCTAGCGTTGATTTAGTTCTCGCTGGTCATGTGCATGCTTATGAACGCTCTA AACGTGTATATAATGGAAGATTAGATCCATGTGGTGCTGTCCATATAACCATTGGTGATGGAGGGAACAGAGAAGGCTTA GCTTCTAAGTATATAAATCCACCGCCAAAGTGGTCAGAATTCCGCGAAGCCAGCTTCGGTCACGGTGAGTTGAAGATTGT AAACTCCACGCACGCCTTCTGGAGTTGGCACAGGAATGACGACGATGAGCCTGTAAAATCTGATGATATTTGGATAACCT CTATGGTCACTTCAGGATGTGTTGATCAGAAGAGAAATGAACTTGGGCATACACTTAAGACACCCTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0166700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVTQGNHEVENIPLLKDGFIAYNSRWKMPFEESGSSSNLYYSFEVAGVHIIMLGSYADYDQYSDQYRWLKGDLLKVDRKR TPWLVVLFHVPWYNSNTAHQGEGGDMMKAMEPLLYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGL ASKYINPPPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSMVTSGCVDQKRNELGHTLKTP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22953:SF123
1 229 229 5.3E-147 –
Pfam
PF00149
1 130 130 8.3E-13
IPR004843
Gene3D
G3DSA:3.60.21.10
1 223 223 3.1E-85
IPR029052
PANTHER
PTHR22953
1 229 229 5.3E-147
IPR039331
CDD
cd00839
1 214 214 5.62554E-88
IPR041792
SUPERFAMILY
SSF56300
2 213 212 3.96E-44 –
Pfam
PF14008
146 202 57 2.2E-19
IPR025733

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003993
Molecular function Acid phosphatase activity Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.
Subterm of
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0166700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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