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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0168400 |
| Transcript ID | LotjaGi6g1v0168400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase; TAIR: AT1G06520.1 glycerol-3-phosphate acyltransferase 1; Swiss-Prot: sp|Q9SHJ5|GPAT1_ARATH Glycerol-3-phosphate acyltransferase 1; TrEMBL-Plants: tr|V7BMT1|V7BMT1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0168400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45396003..45399705) extracted from Lotus japonicus Gifu genome v1.2.
TTGTTAATGACTATAAATATTCTCTGCTATACTGCTTTTGCACTCTCACCTAACTAATTTTCCTTTAATCCTGCTACATT TCAAGTACCATAAACTTTACAGGCTTCTGAGAGAAACAGAAAGAGAATTATGGTGTTCCCATTGGTGCTCCTAAGGCTTG CAAAATGGCTCTTGTACCATGTGCTTGTTAACTCATGTTATAAAGCAGCAAGGAAAATAAAGAGTCATGTGTTTCATTTG AGTCATCATGAGTCATCAAAACCACTTCAGAAACCTTCATCTTCCCCTAGCACTGTAAAATTTGATTTGGTTGCTTGTGA CATTCATGGGGTGATCTTAAGATCCTATAATTCATTCTTTCCCTATTTCATGTTAGTTGCCTTTGAAGGTGGCAGCATTT TCAGAGCACTTCTATTACTCTGTTCCTGTCCTGTCCTGTGGATTTTAAACTATGAACTGAAGCTTAAGGTCATGATCTTC ATCTCATTTTGTGGGCTCAGAATAAAGGACATGGACATGGCTGCAAGGGTAGTTTTGCCAAAGTTTTACATGGAGAATCT CAACCTTCAGGCTTATGAGATTCTGGCTTCTGCAGGGACTAGAGTTTTCTTCTCTGCTGTACCTAGAATGATGGTTGAAG GATTTCTCAAGGAATATTTGAATGCTGATGATGTTATTGCTACAGAGTTGCACACTGTTGGCTGTTACTTCACTGGTTTG CTCTCTGGGAAAGGTTTGATTGTGAAGCATAGTGCTCTCAAGGATTATTTTGGTGATAAAAAGCCTGACATAGGGATTGT TAGCTCAAGTGTTCATGATCAGGTTTTTATCTCTCATTGCAAGGTATATCTCAAACTAGCTTAATTAGCTTATCTGAAAC TAGTATTTAATGTCTTGGTATAAACTATATAAACTTTCTAATTAAGGGCATGTCCGGATGAAGAAAAAGGATAACTTTTT CATATCAAACAAATATTATCTAATGAAAAAACCTTATACTATGGAAGGTATAAAATGATAGATTATTATGGACTTCAATG TTCTTTTCCTACTTATTTTTAATAACATTATATACATCTTGATTTAAAAATGCAAAGTTTTCCATCTCTTATACATTTTT CTTCAACACCCTCAGTTCGAACATATTGTTAGTTTCTAGATGTTTTCACTCAGAGCAAAGATAAAGAATATTGATAAAAA TTCATGGACATACATACGCATTTATATAACACCATTCAGACATACTCGTTAGTGGATTGAAGGGTGTCTGCATAAATGAT ATGTCTATCTATAAGAACTCAGAATATATATGCTTGTCATGGCACTAAACTTAGGTCCAGTACTATTTAACTAGATCAGG AACTTCTCACGTGGAAACTCCCTCAGTGATATTTTTTTGTATGTATTACATAGATGAGACCTTTTAAATATTTGACATTG CTATGTGACTTGAGAGAATCATAATCTTGTTTAACTGGTATGAAATCTTCAATTCCAAAACTGTGTACTATTCTCTGCCT CATTGATAAAATGTTGACATATCAACTAAAGATAATCATGTAAATTTGTTTGGAGTTTGGTGAAGATTTGATTGGTGAAA ACAAGAAATCGTTGAGACACCATTGGGGAAAGATGATGTTGAAACCGTTTAGGTAAACTGTTTAACTAATGTGTCGGTGT TTGGTGGCCACCTATAAGGATAAAAGACTGAAGAATATACCAAGCAATCATCACAATAAAGTCTGTGTTAGTTCACAGAT AAACGTTATTATTTGACCTTCTGGCTCTGGCATGTTGATTTTAGACTAGTTGGTTCAATATAGCAAATAATATCTATTTT ATCACATTTAGATTAAAATGTATTGAATTTCTATAATTCTATATATTTAATACTCCAGCTACATGATAATGACAGGAAGC TTATGTGGTGAACAATGAAGAGTGTGATCCAGGCTCAGTTATGCTATTGCCAAGGGAAAAATACCCAAAGCCTGTGATAT TTCATGATGGAAGGCTAGCATTCTTTCCTACTCCTTCAGCAACACTTTGCATGTTCATTTGGCTCCCAATTGGAGTTCTT TTAGCCATTTACAGAATGCTTCTGGGAATTTTCCTATGTCACAAATGGACATTAGCATTAGTAATATGGAGTGGCATAGA TCTGAATGTCAAAGACTGTAGCAACCCTCAAAGATCAGAGAAAGGGGTCCTCTATGTTTGCACACACAGGACCCTCTTGG ATCCTGTTTTTCTTAGCTTGTGTTTGGGGAAGCCTCTAACTGCTGTCACATACAGCTTAAGTAAAGTTTCAGAGTTCATA TCACCAATTAGGACAATGAGATTGACAAGGGACAGAGAAAAAGATAGGGAAACCATGCAGAAGCTGCTTAGTGAAGGGGA TTTGGTGGTGTGCCCTGAAGGAACAACTTGCAGGGAGCCATATTTGTTAAGGTTCAGTTCTCTTTTTGCAGAATTGGCTG ATGTGGTTGTCCCTGTTGCTGTTAATGTTCATGTGAGCATGTTCTATGGGACCACAGCTAGTGGGTTGAAGTGCTTGGAC CCACTTTTCTTTTTCATGAATCCAAGGCCTAGTTATCACATTGAGATACTTGGAAAGGTTCCTGAGGAACACACATGTGG TGGTGGAGAGTGTGCTTATGAAGTGGCAAACTATATCCAGAGACAGTTGGGTGATGCTTTGGGATTTGACTGCACCAACC TTACAAGGAAGGATAAATATATGATGCTGGCTGGGAATGAAGGAGTTGTTCAAGAAAAAGAGAGGTGAAAAATCTTGCAA TGAAGTTTCTCATTCATTTGAGTTAGTGTTCAACTTATATTAATCAACTGTAAGTGCCAATTCCACTGGCATGATGAAAC CAAACATGCATATGCTATTAGATATTAAGTTATTGAAAAATAGTAACACACTCTTTTGAAGATACTAATGCACCTAAAAC TCCTATTAATAATTAAGGAAAGCATATATATAAATGTGGAATTAAATGGTTATATCAAATGACTCATTTCTATCCTTCAC CATCTAGCATTTCAACCCATAACTCTTGAGTAATTTGTCACTCAATAATTATCATGAACACATCTGTAAACATTATTAGC ATAACAGTGACACCTTCAAGGAACCACAAAGATGACGCCTTTACCTATTGCCTCCCAACACAGCGGCCTAAAGCCTAAGT TTCCAACAACCCAAACCGCACGCAACAACGGAGAAAGGGACGGAGAAAGGGAGACGTCAACCGTCTGACAACGACGAAAC AACCTAAGAGGGAAAGTTTTCGACTTTCGCTACCTCCTAACATGCAACTATGCAATACAAGAAGAAAATGAGAAGAACGA AGAACTTACTAATTTGAGAGATTTGAAAATCTTAGTAAGAAATGATTCACACACCACAGATCGTAGCAATTCTAAATTGG GTGAGAAACCAACAATAAGACTAGCAGAGTAGCAGTTGTACGCAAAGCTTGTCTTTGTCTGTTACCTCTTCATCAGCTAT ATGCTCAAAACAATTATGTGTTGTGTTCTCTCAACTGATTCAAACTCGGTTAAAAAGTTATGCTTTGCCCAATATTTTGG TGCCAACTAGTTTTTTTTTTTCTTTTCTGCATAAATGTTTTGGTGTGGGTTTGGCTCCAATCACTCCACCATGAGCCAGG ACACGCACTTGTAATTATAAATC
CDS sequence (LotjaGi6g1v0168400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTCCCATTGGTGCTCCTAAGGCTTGCAAAATGGCTCTTGTACCATGTGCTTGTTAACTCATGTTATAAAGCAGC AAGGAAAATAAAGAGTCATGTGTTTCATTTGAGTCATCATGAGTCATCAAAACCACTTCAGAAACCTTCATCTTCCCCTA GCACTGTAAAATTTGATTTGGTTGCTTGTGACATTCATGGGGTGATCTTAAGATCCTATAATTCATTCTTTCCCTATTTC ATGTTAGTTGCCTTTGAAGGTGGCAGCATTTTCAGAGCACTTCTATTACTCTGTTCCTGTCCTGTCCTGTGGATTTTAAA CTATGAACTGAAGCTTAAGGTCATGATCTTCATCTCATTTTGTGGGCTCAGAATAAAGGACATGGACATGGCTGCAAGGG TAGTTTTGCCAAAGTTTTACATGGAGAATCTCAACCTTCAGGCTTATGAGATTCTGGCTTCTGCAGGGACTAGAGTTTTC TTCTCTGCTGTACCTAGAATGATGGTTGAAGGATTTCTCAAGGAATATTTGAATGCTGATGATGTTATTGCTACAGAGTT GCACACTGTTGGCTGTTACTTCACTGGTTTGCTCTCTGGGAAAGGTTTGATTGTGAAGCATAGTGCTCTCAAGGATTATT TTGGTGATAAAAAGCCTGACATAGGGATTGTTAGCTCAAGTGTTCATGATCAGGTTTTTATCTCTCATTGCAAGGAAGCT TATGTGGTGAACAATGAAGAGTGTGATCCAGGCTCAGTTATGCTATTGCCAAGGGAAAAATACCCAAAGCCTGTGATATT TCATGATGGAAGGCTAGCATTCTTTCCTACTCCTTCAGCAACACTTTGCATGTTCATTTGGCTCCCAATTGGAGTTCTTT TAGCCATTTACAGAATGCTTCTGGGAATTTTCCTATGTCACAAATGGACATTAGCATTAGTAATATGGAGTGGCATAGAT CTGAATGTCAAAGACTGTAGCAACCCTCAAAGATCAGAGAAAGGGGTCCTCTATGTTTGCACACACAGGACCCTCTTGGA TCCTGTTTTTCTTAGCTTGTGTTTGGGGAAGCCTCTAACTGCTGTCACATACAGCTTAAGTAAAGTTTCAGAGTTCATAT CACCAATTAGGACAATGAGATTGACAAGGGACAGAGAAAAAGATAGGGAAACCATGCAGAAGCTGCTTAGTGAAGGGGAT TTGGTGGTGTGCCCTGAAGGAACAACTTGCAGGGAGCCATATTTGTTAAGGTTCAGTTCTCTTTTTGCAGAATTGGCTGA TGTGGTTGTCCCTGTTGCTGTTAATGTTCATGTGAGCATGTTCTATGGGACCACAGCTAGTGGGTTGAAGTGCTTGGACC CACTTTTCTTTTTCATGAATCCAAGGCCTAGTTATCACATTGAGATACTTGGAAAGGTTCCTGAGGAACACACATGTGGT GGTGGAGAGTGTGCTTATGAAGTGGCAAACTATATCCAGAGACAGTTGGGTGATGCTTTGGGATTTGACTGCACCAACCT TACAAGGAAGGATAAATATATGATGCTGGCTGGGAATGAAGGAGTTGTTCAAGAAAAAGAGAGGTGA
Protein sequence (LotjaGi6g1v0168400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFPLVLLRLAKWLLYHVLVNSCYKAARKIKSHVFHLSHHESSKPLQKPSSSPSTVKFDLVACDIHGVILRSYNSFFPYF MLVAFEGGSIFRALLLLCSCPVLWILNYELKLKVMIFISFCGLRIKDMDMAARVVLPKFYMENLNLQAYEILASAGTRVF FSAVPRMMVEGFLKEYLNADDVIATELHTVGCYFTGLLSGKGLIVKHSALKDYFGDKKPDIGIVSSSVHDQVFISHCKEA YVVNNEECDPGSVMLLPREKYPKPVIFHDGRLAFFPTPSATLCMFIWLPIGVLLAIYRMLLGIFLCHKWTLALVIWSGID LNVKDCSNPQRSEKGVLYVCTHRTLLDPVFLSLCLGKPLTAVTYSLSKVSEFISPIRTMRLTRDREKDRETMQKLLSEGD LVVCPEGTTCREPYLLRFSSLFAELADVVVPVAVNVHVSMFYGTTASGLKCLDPLFFFMNPRPSYHIEILGKVPEEHTCG GGECAYEVANYIQRQLGDALGFDCTNLTRKDKYMMLAGNEGVVQEKER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 78 | 78 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PANTHER | 14 | 527 | 514 | 1.1E-259 | – | |
| PANTHER | 14 | 527 | 514 | 1.1E-259 | – | |
| Pfam | 63 | 222 | 160 | 3.3E-6 | – | |
| Phobius | 79 | 106 | 28 | - | – | |
| Phobius | 107 | 271 | 165 | - | – | |
| Phobius | 272 | 290 | 19 | - | – | |
| SUPERFAMILY | 277 | 524 | 248 | 3.01E-29 | – | |
| TMHMM | 284 | 306 | 23 | - | – | |
| Phobius | 291 | 295 | 5 | - | – | |
| Phobius | 296 | 316 | 21 | - | – | |
| CDD | 311 | 496 | 186 | 2.65448E-22 | – | |
| Phobius | 317 | 528 | 212 | - | – | |
| Pfam | 331 | 426 | 96 | 1.6E-8 | ||
| SMART | 336 | 437 | 102 | 3.5E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi6g1v0168400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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