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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0175900 |
| Transcript ID | LotjaGi6g1v0175900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pleckstrin-like (PH) domain protein; TAIR: AT2G30880.1 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q5F4B2|SWP70_CHICK Switch-associated protein 70; TrEMBL-Plants: tr|I1JJ22|I1JJ22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0175900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:46609113..46616541) extracted from Lotus japonicus Gifu genome v1.2.
CCCATTTTTAGTACAAAACATAGCATCTTATACTGCTGAACAGATTAGGAGGATCAGATTCTACCAAAACATGATCCTGA TAGTGAAAAGCCATATGGGCAATAAACTCAGCAACATCATTGACTATTTGCGACAGTTAGTAGAATTTAAATTCCTAAAG AAGGATGAAAGAAGTTTGCAATCCTGCACAATTCTAGCAAAGAAGTTGTTGAAAGGCACGAGTTTGGTCCATGCTTGGTA AAGTTGTATGCAGTTTGTTTAAACTTCGAGATCCTGAAACTCGAGATCCTAGGCCAAGAGAAGGAACCAACGTAGTCCTA GTGCTTCAGCAATTACAAGTTCATGCATAGAGGGAAGAAATTTGCAACCTGCAGCAAGGGAGAAACCTTCATGGTCTCTG AAAATAACGCTCAAACTCGTTCCTCTTGAGGCTCTGATGGATGCGTTAATGTTAGCTTTGATGGTGTCTCCCTGTAGAGC GTGCCAATGGGGAGGTGGAGGGGTTTAGGGTTTAGGGGGGCATAGGCTCGGGTTGTTTGGGGCTCTGGACTCCGACTTGG GAGGTACATAAGTGAGGCCTGTAGAACCACTTGGTTAGGGGGAGTTCTCTTGGTTTCAAACAACCACAAATTCCTTCTTT TCCAAATTGCCCATATGAGTGAGAAAAGCCAAGGGAGGCCTTCGTTAGGTAGACTTGACATCATAAGCTCCAACCAACAT CTGAATGATGAGACATCTTTCACGGGGATATGGAGGCCTAGAGGAGACAAACACCATATTCTTTTTAACTTCAAGGCAAG TAAGTAGGACGTGGCCAACTGATTCTGGGGCTTCCCCACACATAGGACAGGTTTGACCCATCTCTACTCCCCGGTGTTGT AGGTTATGCTTCACTAGTAGCGAATTTTAGGCAGATCTCAAAATAAGTTTCTTACATCTAGGTTGGATTTCCACGCGCCA TAGTCTTGTCCAGAACATATTGGAGTTGGCATCATAGGAGGTTGCTTCATTCAGGTTGTTTGAAGGAGGCCCACATCAGT TTATCTGGCTTTGCATGGATGAGAAGTGGTATCTTCAGAATCTGTTTTGCTTCGTAGTAGGAGAAGGTCGATGAGATTAT ATTAGTCTTCCATGAATTTTTGTCCCTATCAATAAGGTCTGCAACCCATGTGAGACTTTGAGGATGTTGTCCTCTTTGCC CAGGTCTCTCATTCAACTTTTGTGCTAGCCAAGTGTCATGCCAAAGAGGCTCCTCCAAGTGTAGCTAGGTCGATATCCTT TAGCTAGGAGTGAGTTTGGATTTGTTCTCAGAAGCCACCATTACTTTGCTAGTAGGGCTTTGTTGAAGTTTTTGAACCTC CTGAACTCAAGACCACATTTTGCCTTCCTCATTGTGATTTTCTCCCCGCTTAGCCAATGCATCTTCCTTTTCTCTACATC CCCTCCCGAGTAGAAGCGGCTACTAAGGCTCTCAATGTGATGTGGATGTGAGTTTGAAAATTAATATGAATAAATGATAA ATTTATAAAACCATAATTAAAATAGCTATATTTCTTGTAAAAAAATAGCTATATTTGCACCGACAATGGCATAACCTGCG ACCAACTACAAGTCCATTCATCTCAACGTATAAAAGGTTTCCAAAACCTGCCATTCTTCTCCATTTTGCACTAAGAATTT TCATTTCTAACAATTTAATATTTATTCAATACTCCATCGCTACCAACAAATTTTTTTGGAAACTCTTGATCTTCACGCCT ATGGCTTCCAATGGTGCTTCTCTGGTATGGTATCTCTCTCTTCTTCTCTCCCACTCTATGTGTGTGTTTTTGTGTGTTGG AGTATTCAGCTGAAATGGAATGTTACATACAGCAAACTGCTGCGGATACAGAGAATAGCTTGGAGAAGATCAAGCGCCAG CTAGCTTCTGGTTCTGGTAGAAACTTGTTGCAAGGACCACTTCTCAAGCGATCTGAAACAGTAATTTGATCCCCATTTAA CTTTTTTGTTTCTGGGTATAAGCTATGTTGGAGTTTTGATCAATTGGGTGTATATATATGGAGTTTCATTGGTTACCCAT TTCTGGATTTTGGTTCATAGTTGCAAATTTAGCTCCAAGTTTGTATTTTTTCGCTTGGAGATGGTAGTGGTTATATAATA ATTCCAATATGTTAAGGGGTTTTTTCGTGTTCATCTGATTAGTCTTTGTTAAATTTCTGTAGATTAGTGTCTTGAAAGTT GAATCCTGATGCTTTTAGAAGATGCCTTGATGCAATGATGTTTCTGTCTGTCTTTTTCACTAGCTTTTGACAATTTTTTA TGTGTTTGCAGCTAAGAAAATGGAATGAACGATGGGTTATATTGGACCCTACAACCGGGAGAACGGAATACAGGTAGGTT TATACACGTTGTTCCTTCTGGTTTCTCTTTATGTCCAGGAAACAATGATTACTGAACCTTTTTATGTTGTTCTCTGTGGA ATAGGACAAGAAGAAATGAACCAACTGTTAAGGGAACGATTGTGTTTGATGCGAATAGCTCGATTACTGTATCTCCTGTG AACTTCCAGTAAGAATTATAATGTCTTGAACTTGAGTAGTGTCCAGTTACAAAGTTCTGGTGGATTAAATTTATTTTGTA AACCCATTTACATGATGTTCCTAACTTTCTGTGTGTCAGTGGATTGCCAAAGTATGATGGATGCTGCATTTGTATCCTTT TTCTGAACTTACAATCAACAGTTAGTTAAATTACTAACAGCTGGGCAAAAGTCACTCTTTAACGGTCTCCATAAGATATT GGGACACCACAGAAAAGGGATTACTTCCTCTGTGCTGAGACTCCTGGTGCAGCTAGAGCTTGGGTGTCAACCTTACAGTA TGTTTTCTCGTTTAGTTACACTCCCGCTTTCTTCTCTTTTTCATGCTCTCTCGTTATGAAAAGTTCAACTGTTGTGCAAA ATAAATTTTTATTTGTTCTTTATAAGTTATACTGTTGTGCAATGTGTTATTGCTTATGATAATTTTCTTTCTTATCTAAG ACCTTCCATCTAAAAGCCCTTGAAATGGTTTTGCTTTTAAATGTTATACTACAATACTACATGCCATGCTCCTTGAAGTT AGATTTATTTGTATTTTAGATTGATTTGAAGTTGGATATTAAGTATTTTAGATACTTCTGATCATCATCATTGCAAGATC CTATTACTAAAATAATAATAAGAACGTTAATATGCTTGGAGAATCTTATTTGTTGTGAGAGTGTTGGACATGCCTGTGGC TCTTATAGAAACTGAAGAAACAGTAACTTCATTAATCAAACAATGGATTCCATCCTTCAAACTGGCGGAATTTCCCTTGT ATTAAGACTGTAACGGAAAACAAGAGCAATGAGATCAAACAAGTACAATCAGGTCCTGCGGATGGAAGTCCCTATCTAGG CCTCAGGCCACCCGAACCCTGCTTTTCTGCACGGATCTTCTTCAACTTGATATTTACTTATGTTATAAAATGTATTACAT ATCTATGAATCACTGAGTGCGTGGATCAGCTGACATGGGTTGATCCAGCTTAACCAGAGGTCTCAGGTTCGAATCTTGGG TATGTAGCTATGTTTAATACTCGGAGGGAGAGTTCTGCCTCTTTTAGTGGTCCTATCAATCTTGATCAGGATTGTCTCTG GTGGAGCATGTGGTAGATAATCCCCTTGATAAGATAGTTAGTGACTTAGTGTAGTACTTAGTTAAGGGAATTGGTTAGAG AGTGAGTGAAGAAAGGATATAAATGGGAGGGAGGGGGAATATGTAGGGTATTTGGATTTCATTGCAATCAAAGCCATTTG GGGAAAGTTCCAGGTCTCTCAAATACCTGGAGTGTATTAGAGATCTATTAATAAACATTGTTCTGTTTTCTGATCCAATT CCTTTTCTATTAGGATACCTGCAGTCTTAGACCCCAAAAACTATTACATACTCATGAATATCTAATTTATAAAAAATGTG GCATGCGTGATCAATATGTTCATATCATATTTTTCAACGGTCTGCTTTGTTAAGTTTGTCGGGCATAAGAAGTTATTTAG CGGAATAAATTGAACAGGACTTTTTTTTGAAGTAAATGGATCCCCACTCGATGATTCAAATAAAATTAAAATGAAAAGCT AATGTATGGTTCAGCTTATATTGTCAATGTTTCTTCTTACATTGTAATTTTGTCTGGTATCTTTGCTTTTAACTATAATA GATTAATTTCTATGATTTGAGGATTGCTTCTGTTGCAAATTTTCTTGCATTATTTAATTCAGTATCTGATTTGTATAACC ATTTGACATTAGTGCAACCCAATTGGTTCTAAAAGCTCACAAGGAGGCTGTGGATTCCTTAAGCGGCAATGGTTCCACTA AACTAGGAACTGTCGCAGCAGTTGTTGCCGCAGCCAATTCAACGGCCGTTGAATGTTCTAAAGAAATTGAAGCAGCAATG CAAATATCTTTACGGAACACTCTGGGAATGATGACAAATAAGACAACTGATGGTCCAATGGATGATTTAACAATCATGAA GGTATATTCTTACTGGTACTTTTCCATCTTTCCTTTATCTAGATCAATGAAAACATGTTCCTGCTTTCATTGAGGACACC ACTTTCATGGGGAAAGCTTTCTTGTACAATATAGTATCAGAATCCCACTTGAAACGTTATGGAACGGGTGGCTGGTCTTT TTGAATACTTCCTTTCACTAAGTTCCTGCTTCCAGTAATTAAATCTAAATTTTGTCACTGATTGGGGTTTTGAAAGATGG TATAAAAATAGTCTTTATTATCTACTAATAAATGAAACATCACTAATGAAGAAATGGTGAACATAATTTTTGTCTCTTTA TTTGTCATATATTAAACAATACAAGCTTTTCTGTCAATGGTTTAATAACATTATCAGTGGCTGGCTCTATTTTTCATTAA GCTTTTAGGGTTAGATAGTTTACCCTTAACTCTGCTGTTTGTTTGGTTTACTTACCTTTACAGACTTTCTAGTGTATTTC CAACAAAAATAAATAAAAGAGAAGAAAAGAAAAGTGTCTCTCTCAGGTTGATCATGTTAGGATCAGCGAGATAGCAAAAC ATTGAGGAATTGCATATCCAATGGACTTATTAAGAAACCACACTATTACCACATCTTAACCTTAACCTTCTTACATTGGT CTTGTTGATGTTATCGGGTTAGTTTCCTGTAATTTTGAAACTTCCAAGCAGCTGAAGTGTGTTCTCTTCATTTGAAGTTC ATATGGTTCCACTGACTTTGACCCTTCTTAGCAGAACCTAAAGATTGTGATAATGGAATATATTTTGGTACCCCTAAATT AGGAGGAATATTTGGCTAGATCTGACGAAGGAAGTTTATGTACTCTAGGGGAAGTCTCTTCCTTTTTTTTATGCCCGTAG TTTGGAGTCAGAAAATGGTGGCTGATGTCAAAGAAAATAAAAGATGGCGGTTTTAAATGGAGAAGGGAAGTATTTAACTA GAATTATATGTAGGTGGATGTTTTACTCTCTTGTTCCTACATTTTTTTCGATTGAGATTTGGTTCTGAAGATATTCCTCT GTTCTGCAGGAAACTCTATTGGTCAAGGATGAGGAGCTACAGAATTTTGCTCGAGATCTTCGTACCCGGGATTCAACTAT AAGAGATATAGCTGAGAAACTATCTGAGACTGCTGAAGCTGCCGAGGCAGCTGCATCAGCGGCACATACTATAGATGAGC AATGGAGAAATGCCTGTGAAGAAATTGAGAGTCTGAAGAAAGACTCAGAGAAGCAGCTAGAGCTTTCTGCTCAGAAGGTG TGCCATTATGGTGCCTTTTAAATTGTTATTTTTTGAGCTGATTGAATTTTTAGTGATTCTCAGTAACATAAATATGAACA TTTCACTCAGATATTATGAATATTACTTCGAGTGAAATCGCCTTACCGGTTCATTTTGTTGATAACATTTATTCTTTTGT AGCTAAAAGAGTATGAAGTAAAGATCATAAGCTTGAGCAAAGAAAAAGAGCAGTTAAGTAAACAGAGAGAAGCTGCTACT CAGGAGGCAAACATGTGGCGCTCTGAGCTGGGAAAAGCTAGAGAGAGTGGTGTGATCTTAGAAGGCGCTCTTGCAAGGGC AGAAGAAAAGGTTAGGGTCGCAGAGGCAAATGCTGAAGCTAAGATAAAGGAGGCGGTTCAGGGAGAATCGGCAGCAGTAA GCGAGAAGCAGGAGCTTCTTGCATATGTGGACAAACTCAAAGCACAACTTCAAAGGTTTAGGCATCTTTTCTTCTTCAGC ATTGCATAAAATTTGCATTAACTAGGTTCTATTTAATTTGCTTTTCTATATAACATAAGCTTCTTATTTTGTTTCTGAGT GTGTTCTCAACCCAAACATGCTGGTGGTAACAACATATTAAGCATGGCAATGAGTGAAACGTGAGAATGAAATGAAATGT AGGATGTTAAGTTGATTGAGTTGGTATTGTAAGTCAATTATTTGCTATGAAATGCATTGTGATCATGAAAACAGAGAGAA CTATGATAATTGAAGCCTGTGTTGAATTACAATGTTGACATGCTAGATAATTTTCTTGTTAATAGACAACACATTGATTC AACTGAAGTTTTTGAGAAGACGGAGTCTTGCTCAGATACAAAACATGTGGACCTGACTGAAGAGAATGTGGATAAAGCAT GCTTAAGTGTTTCTAGATCTGTTCCTGACCCGGCGGCGGCCGAGTGTGTGGTCCAGATGCCAACAGACCAGGTGATCATT CAGCCTGTTGGAGACAATGAGTGGAGTGATATTCAGGCAACAGAGGCAAGAGTAGCTGATGTTCGGGAAGTTGCATCTGA ATCTGAAGTAAGCAGCTTGGACATTCCTGTGATTAGCCAACAAGGTACCAATCACCAGTGAACAAGGAGCAAACACTTTT AATAAACCCTGATATAATCCACATTCTTCCAACATGCAGAATTTTTATGTTATAGGGAATTTAACTACATCATTATGTTG GGTGGCCATGTAAACCTCTCCACTTCAGCTTTTAGGCTAGTGAATGAGGTTTTATCGTACATACCCTTCCCTGAAAACCT GTAAAATTTATTTATGTGGTATACAAAGTTTATTTATACATGTAAAATTTGACCAATAAACAGATTGATCCTCAACCAAG TGTTTGGTTAGAGAGAAACTGAGGGGAGGAAAGGGAAAATGAGAGGGTAAAATTTCTCTCTTCGTGTGGGGAATGAATAT TCTTGTGTTAAATTTTACTTGATTTTTTCATATGAATTTTGTATCTATGTCAAATTATACGTATAAATAAGACTTAATTG CACTTTTGGTCCCCCAACTTTGCCATTTATGCGAAAACTGTCCCTTAACTAAGAAATTAGCAAAAAGCA
CDS sequence (LotjaGi6g1v0175900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCAATGGTGCTTCTCTGCAAACTGCTGCGGATACAGAGAATAGCTTGGAGAAGATCAAGCGCCAGCTAGCTTC TGGTTCTGGTAGAAACTTGTTGCAAGGACCACTTCTCAAGCGATCTGAAACACTAAGAAAATGGAATGAACGATGGGTTA TATTGGACCCTACAACCGGGAGAACGGAATACAGGACAAGAAGAAATGAACCAACTGTTAAGGGAACGATTGTGTTTGAT GCGAATAGCTCGATTACTGTATCTCCTGTGAACTTCCATGGATTGCCAAAGTATGATGGATGCTGCATTTATATTGGGAC ACCACAGAAAAGGGATTACTTCCTCTGTGCTGAGACTCCTGGTGCAGCTAGAGCTTGGGTGTCAACCTTACATGCAACCC AATTGGTTCTAAAAGCTCACAAGGAGGCTGTGGATTCCTTAAGCGGCAATGGTTCCACTAAACTAGGAACTGTCGCAGCA GTTGTTGCCGCAGCCAATTCAACGGCCGTTGAATGTTCTAAAGAAATTGAAGCAGCAATGCAAATATCTTTACGGAACAC TCTGGGAATGATGACAAATAAGACAACTGATGGTCCAATGGATGATTTAACAATCATGAAGGAAACTCTATTGGTCAAGG ATGAGGAGCTACAGAATTTTGCTCGAGATCTTCGTACCCGGGATTCAACTATAAGAGATATAGCTGAGAAACTATCTGAG ACTGCTGAAGCTGCCGAGGCAGCTGCATCAGCGGCACATACTATAGATGAGCAATGGAGAAATGCCTGTGAAGAAATTGA GAGTCTGAAGAAAGACTCAGAGAAGCAGCTAGAGCTTTCTGCTCAGAAGCTAAAAGAGTATGAAGTAAAGATCATAAGCT TGAGCAAAGAAAAAGAGCAGTTAAGTAAACAGAGAGAAGCTGCTACTCAGGAGGCAAACATGTGGCGCTCTGAGCTGGGA AAAGCTAGAGAGAGTGGTGTGATCTTAGAAGGCGCTCTTGCAAGGGCAGAAGAAAAGGTTAGGGTCGCAGAGGCAAATGC TGAAGCTAAGATAAAGGAGGCGGTTCAGGGAGAATCGGCAGCAGTAAGCGAGAAGCAGGAGCTTCTTGCATATGTGGACA AACTCAAAGCACAACTTCAAAGACAACACATTGATTCAACTGAAGTTTTTGAGAAGACGGAGTCTTGCTCAGATACAAAA CATGTGGACCTGACTGAAGAGAATGTGGATAAAGCATGCTTAAGTGTTTCTAGATCTGTTCCTGACCCGGCGGCGGCCGA GTGTGTGGTCCAGATGCCAACAGACCAGGTGATCATTCAGCCTGTTGGAGACAATGAGTGGAGTGATATTCAGGCAACAG AGGCAAGAGTAGCTGATGTTCGGGAAGTTGCATCTGAATCTGAAGTAAGCAGCTTGGACATTCCTGTGATTAGCCAACAA GGTACCAATCACCAGTGA
Protein sequence (LotjaGi6g1v0175900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNGASLQTAADTENSLEKIKRQLASGSGRNLLQGPLLKRSETLRKWNERWVILDPTTGRTEYRTRRNEPTVKGTIVFD ANSSITVSPVNFHGLPKYDGCCIYIGTPQKRDYFLCAETPGAARAWVSTLHATQLVLKAHKEAVDSLSGNGSTKLGTVAA VVAAANSTAVECSKEIEAAMQISLRNTLGMMTNKTTDGPMDDLTIMKETLLVKDEELQNFARDLRTRDSTIRDIAEKLSE TAEAAEAAASAAHTIDEQWRNACEEIESLKKDSEKQLELSAQKLKEYEVKIISLSKEKEQLSKQREAATQEANMWRSELG KARESGVILEGALARAEEKVRVAEANAEAKIKEAVQGESAAVSEKQELLAYVDKLKAQLQRQHIDSTEVFEKTESCSDTK HVDLTEENVDKACLSVSRSVPDPAAAECVVQMPTDQVIIQPVGDNEWSDIQATEARVADVREVASESEVSSLDIPVISQQ GTNHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 478 | 468 | 7.8E-122 | – | |
| PANTHER | 11 | 478 | 468 | 7.8E-122 | – | |
| Gene3D | 27 | 135 | 109 | 4.3E-15 | ||
| SUPERFAMILY | 31 | 131 | 101 | 3.36E-15 | – | |
| ProSiteProfiles | 31 | 135 | 105 | 8.012 | ||
| SMART | 32 | 137 | 106 | 2.7E-6 | ||
| CDD | 34 | 130 | 97 | 5.44523E-9 | – | |
| Coils | 270 | 318 | 49 | - | – | |
| Coils | 333 | 353 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0175900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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