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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0176600 |
| Transcript ID | LotjaGi6g1v0176600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT2G30860.1 glutathione S-transferase PHI 9; Swiss-Prot: sp|O80852|GSTF9_ARATH Glutathione S-transferase F9; TrEMBL-Plants: tr|I3T6E5|I3T6E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0176600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:46805807..46810250) extracted from Lotus japonicus Gifu genome v1.2.
GTTATTCTCCAAAGGCCAAAGATTATGCTCTTCAAGATTCTATAGGCCTCTCCCCAGTTTTGCTTTTAAATGAGTGCAGG CCGACTTGTCTCCAAGAATGCATCCTTCCTGGGATTTTAATCTCCTTGAACTTCCATCCTACATCAAATTTTAGGGATCA AAGAAGCAATTTACACAATATATATACTAAATAAATATTTACTAAACTAATCAGTTTGATGGATAAGCACGTACGTAGAT CACATAAATGCTAAAATGGTATTTAAATACAGGTAAAAATGTCACTTATCAACTCCTCAACTTAGCACTCTATTTGCTTT CAAACAAAAGGTATTGATTGTCATCTAATAAGCATGTTCAATGGATGAACTTCAAAACTCACATAGCAATATTTCTTTAT GCTGGATGTAAATTTTTGGGGATTAGATGTAACTTTTCATCAAATGCTTCTATGAAATGATTTTAATGATATAATTTTAT TTTTTATGTTTGTTTAGATTCATTACCTAGAACATAATTTTTTATTTGATATGTTAGTTTGAATTGGACATTCGTTGTGT TATCTAGTGAATACAAAAATTTCTAAGAATAAAAAAGAATAAAGTTATATTCCTTAGTCAATAATAACATCTAAGCTTAT GACAATTAGCTTTGTTAATCATTGAAGAAATGGGTGATTAGGATTATTAGAATTGAATGGTGAGGATTAAACAATGAAGT GAGTGTTTGACTATTTGGTTCAATATTCTCGAACATTCCAAGAGAGTTAAGAAGGAAAATCCATGTGTCACTGTTAGAAC TTTCCTTATCCTTATCCTCCTCGAGGACACACGACTACAAGATCCACAACTAGAATCAGACAGAAACAACATAATCCTCC GTTGCCTGTGAACTGAACTTGGACAGTAAACATGGTGGTGAAGGTGTATGGCCCGATCTTTGCTTCCCCGAAAAGGGTGC TTGTGTGTCTCATTGAGAAGGCTGTTCAGTTTGAAACTGTGCCTCTTGATCTCTTCAAGGGAGAGAATAAGGAACCTGAG TACCTCAAGCTCCAGGTTCAATCCTTCTTTTTTACAATTTTTCCACTTGGTTTGAAGTTATATATATACAAATTGATTTT GATTTACCTGTTTCTCATAAATTTGCTTTGTTTTGCAGCCATTTGGAAAGCTTCCTGTAATTCAAGATGGTGATTATACC CTCTATGGTTAGTCAATAGCCCCTTAATAACCCTAATTTCTATTGCATTCTGAAGTTTTTTTCTTGTATCATGTGGTTAA GGATTTGTGATTTTTATGTATGTCCTATGTCCTTGTAGAGAGCCCTTGTATTTGGAATGATGTTAGATTGATTGCATGTT TGAAATTCTTTCTGTAATTGATTTTAATCCCAAAATCAATTATTGGGAGAAGCTGAGTAGAGTAGCTTGTCAGTGCCAGT CTGATAGGATGAACAGTGCGCATGAACAGTGCTCGTGAACAGTAGCAGTTAGAAAGTTATTATTTGATTATTTGTTGGGG TAGTTATTGGGTTAGTTATTTACATCAGTTTATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTATTAAATTTC TAGTTATAAATAGGAGTTGTGGCTGTTAGTTTAGACATTCAGAAATTGGGTGGTTGTCTTAGGGAGAGACTGGACTCTCA AAATTCCAGAATTTGTAGGAGAGAACTGGCTCTCGAACACCAGTACTTCCATAAATATTCTGTAATAAATTCGGTTCCTA TCAATTTGGTATCAGAGCACCATCCAGGTGCTGTGGTGCAAATGAATCGTGAAGAAATGGAGAAGAAGACAACAATTAAG AAGAGGGAAGGTAAGGCGTTTCCAACCTTTGATGGTAAAGAGGCTTACTGGTGGTTGATCAAAGTGGAGCAGCACTGTGA GGCCATGGAAATGGCTGAAGAGAAGAAGTTCTCGGAGGCTGAGATGGCTTTGACGGGAGATGCTTTCTTCTGGTGGTATT TCTGGAAAAGAAGAAACCAGAATGCAAAATGGTGGGATTTTGTGAAGGCTTTACTGAAGAAATTCCAACCAGAAATGGAT CCTGACATACCAGTATATGTTAAAGATTCTAGAGAGGAAGAAAGCCCAAGGATAAATGAAGTCTTGGAGAATGCAAGAGA AGGCCATTTAGTAGAATCAAAATCAGAGATGATAGAGACCACAGTAGAGGCGGAGAAATCCTTAACCTTTGAGATGCAAA GACCCAATCTTGAAGCAGAGGTTGTAAGAAGAGGTGATGGAGTGAGTCTTGGACCCCGGTGGAGAAAGCATCGAAAGATC CATCAACAACCGAAGACGATGAAGAGACGCAAGTCTCTGAATAAAGAAGGGGAGCCAAGACAGAGGAATGGTATGTGGGT CAAATGTCTTTCAAGGATCAAGCATCTTCCACCACAGGCATTGAACAGACTGCAACACTTGGCATCTGCAGAGATGATCT TGTTGAAAGAGGGGAAGACAGGAACAAAATGGGCTGCGTTAAGTGGTTTGACCAACTTCAAACAGTGGGATCCAGGAGGA GGTATTTTTCAGAGTCAAACTCCAGAAGTACTGATTAAAACTGCAGAACATTTGGAGCAGCCAACCTACATTGAAGGAGC ATTGCCTACTTCCCACCTTGAGGACAAGGTGGATCTTTTAGGGCGGGGTATTGATAGGATGAACAGTGCGCATGAACAGT GCTCGTGAACAGTAGCAGTTAGAAAGTTATTATTTGATTATTTGTTGGGGTAGTTATTGGGTTAGTTATTTACATCAGTT TATGTTAGTTATGTTCTATCAAAACTGCCTAGGGGTGGTTATTAAATTTCTAGTTATAAATAGGAGTTGTGGCTGTTAGT TTAGACATTCAGAAATTGGGTGGTTGTCTTAGGGAGAGACTGGACTCTCAAAATTCCAGAATTTGTAGGAGAGAACTGGC TCTCGAACACCAGTACTTCCATAAATATTCTGTAATAAATTCGGTTCCTATCACAGTCGCCAGAATTGATTCTGACTAAA AATAACCTGATTCAACTATGCTATGATTTATACTTGTCCTGCATCTTTGCCTTTCCTGATTCTGATTCCTGTGTTGTGTA TAAATGCACATGGGGGTCTAGTTAAGTGTCTCCCTTTAGTAGAAATTTAAGAATTTTAGCATGTTTGGATCAGTTTATTT TTTTCTCAAAATCATTTTGGGCACCCAGAAGCTACTCACCGAAGTATCTCCCTGAAATTTATACTAACTTTAGAATATTG TAGATAGATTTCCAAACATGACATTTGTCTTTCTTTAGTTATTTTTCAAGAAGGATTTTGGTCCCAAATTTATCTCTTTA CTATATGCAAAATCAAGAGTGATCTATTTACTTTCATACACTGATATTGAACCATTTTGTGCAGAATCTCGTGCAATAAT CAGATACTACGCAGAGAAGTATAGAAACCAAGGAACGGAGTTGCTGGGGAAGACAGTAGAAGAAAGGGGTCTTGTGGAGC AATGGCTTGAAGTGGAAGCACATAACTTTCACCCACCGGTTCTCGACTTGGTTCTCCAAGTTCTGTTTGCGCCATTGAGG GGTCTTCCTTCTGACCAAAAATTGATTGAAGAGAGTGATGAGAAGGTTCAGAAGGTGCTGGATATATATGAGGATAGGCT GTCAAAGAGCAAGTACTTGGCTGGGGATTTCTTCAGCCTTGCTGATCTGAGCCATCTCCCATTTGGTCACTATTTGGTGA ATCAAACTGGGAGAGGGAATTTTGTAAGGGAGAGAAAGCATGTGAGTGCTTGGTGGGATGACATTAGCAGCAGACCTTCT TGGCAGAAGGTGCTTCAGCTTTACAAATACCCTGTCTAGCTGTTATTTAGTTATGGTTTGAGGGTAAAGACTTCACTGCT TCCTGTTACCTGCTTGAGAATAAAATAGAGGCTGCTGCTAGATGCACTATGCTGAACTCTAGTTTGCTTTTGTGGTCTAT GTAAGTTGTGAAAGTTTTAAAAAGCCTAGTACATTGTAATTTTTAAGTGCATGTTTGGAGATCCTTTTAGAATTTGATTC TAAATCCGGAATTAATTCTGCTAAAAAGAGTGAGTAGCTTTTGAGTGTCGCAATTAATTCTGAGAAAAGATAAGCTTAGC CAAACATGCCGTGAGATATCTGAGTGGTTCCAACTCTGGTTTACTAGTTTGATTTTGTGACTTATTAGATGCTAGCTGTG AAAGTTAAGCCTTATATGTTGAGAAATGATGATAACTATCAGTACTTAGGTCTTGGCTCTTGATCTAAGTACAAGGTTTA GGAGTTTCAAATGATAATGATGAGGATGATCACTGCACTGGTCAGTGAAGGGCAAGAATTGAATTTTTTGTTAACTTTAG GAGCTGCACTTTACGAACCCAAGATTTCTTTGATTTAAAAAAAG
CDS sequence (LotjaGi6g1v0176600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTGAAGGTGTATGGCCCGATCTTTGCTTCCCCGAAAAGGGTGCTTGTGTGTCTCATTGAGAAGGCTGTTCAGTT TGAAACTGTGCCTCTTGATCTCTTCAAGGGAGAGAATAAGGAACCTGAGTACCTCAAGCTCCAGCCATTTGGAAAGCTTC CTGTAATTCAAGATGGTGATTATACCCTCTATGAATCTCGTGCAATAATCAGATACTACGCAGAGAAGTATAGAAACCAA GGAACGGAGTTGCTGGGGAAGACAGTAGAAGAAAGGGGTCTTGTGGAGCAATGGCTTGAAGTGGAAGCACATAACTTTCA CCCACCGGTTCTCGACTTGGTTCTCCAAGTTCTGTTTGCGCCATTGAGGGGTCTTCCTTCTGACCAAAAATTGATTGAAG AGAGTGATGAGAAGGTTCAGAAGGTGCTGGATATATATGAGGATAGGCTGTCAAAGAGCAAGTACTTGGCTGGGGATTTC TTCAGCCTTGCTGATCTGAGCCATCTCCCATTTGGTCACTATTTGGTGAATCAAACTGGGAGAGGGAATTTTGTAAGGGA GAGAAAGCATGTGAGTGCTTGGTGGGATGACATTAGCAGCAGACCTTCTTGGCAGAAGGTGCTTCAGCTTTACAAATACC CTGTCTAG
Protein sequence (LotjaGi6g1v0176600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVKVYGPIFASPKRVLVCLIEKAVQFETVPLDLFKGENKEPEYLKLQPFGKLPVIQDGDYTLYESRAIIRYYAEKYRNQ GTELLGKTVEERGLVEQWLEVEAHNFHPPVLDLVLQVLFAPLRGLPSDQKLIEESDEKVQKVLDIYEDRLSKSKYLAGDF FSLADLSHLPFGHYLVNQTGRGNFVRERKHVSAWWDDISSRPSWQKVLQLYKYPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 74 | 74 | 5.0E-15 | ||
| ProSiteProfiles | 1 | 81 | 81 | 19.48 | ||
| Gene3D | 1 | 85 | 85 | 2.6E-29 | ||
| PANTHER | 2 | 215 | 214 | 1.5E-133 | – | |
| CDD | 2 | 76 | 75 | 6.58821E-37 | – | |
| PANTHER | 2 | 215 | 214 | 1.5E-133 | – | |
| SUPERFAMILY | 3 | 81 | 79 | 1.71E-20 | ||
| SFLD | 4 | 201 | 198 | 0.0 | – | |
| SFLD | 4 | 201 | 198 | 0.0 | ||
| SUPERFAMILY | 72 | 212 | 141 | 3.34E-33 | ||
| Gene3D | 86 | 208 | 123 | 6.8E-52 | – | |
| ProSiteProfiles | 88 | 215 | 128 | 24.498 | ||
| CDD | 90 | 208 | 119 | 3.19565E-66 | ||
| Pfam | 112 | 202 | 91 | 1.3E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0176600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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