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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0178700 |
| Transcript ID | LotjaGi6g1v0178700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding-like protein; TAIR: AT3G07050.1 GTP-binding family protein; Swiss-Prot: sp|Q9M8Z5|NSN1_ARATH Guanine nucleotide-binding protein-like NSN1; TrEMBL-Plants: tr|A0A151SZX0|A0A151SZX0_CAJCA Guanine nucleotide-binding protein-like 3 isogeny; Found in the gene: LotjaGi6g1v0178700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47052424..47059271) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATTTTCAAATAATACGGACAAGTTAAATTACTACAGTATTTTTTAAAAAATATAAAAAATAAACCCCTAAACCCTA ATTTTCACAAGTAAACACCACCCCATTGCATTGCATAGCTTCGATTTCTCTCTGCGCTTCATCTTCGAAGCTCCTCTGCT TCTGGGTTTCACCTTCTCCTAACAGAAGAACCCGAAAATGGTGAAGAAGAGCAAGAGTAAGTGAACTGCTTTCTCTCTCT CACTCTCTCTCTCTCTCACTTCGATTGGTATTTTTATTTTTTCATTGAATTGAATTGTTGGTTTTGCAGAGAGCAAGAGC AAGAGGGTTCCATTGAAGAAGAAGTATAAGATCATAAAGAAGGTGAAGGAGCACAAGAAGAAACAGGCCAAGGAAGCCAA AAAGCTTACTTTGAATGGTAAGAAGAAGGTTGAGAAGGATCCTGGTATCCCCAATGATTGGCCCTTCAAGGAGCAGGAGT TGAAGGCCCTTGAAGCTCGCCGGGCTCGCGCTATTGACGAATTGGAGCAAAAGAAAGCTGACCGCAAGGAAAGGGTAATT TCTCACTTTGTCAAAATCTTCCTTGATAAAGAAAATTGATTGATTGATTGTGATTTGTGAAAAATGAAGATAAAAGAGGG AGTAATTGGAAGACTTTTTAGTGATATTGGTTTTATGGACCTTAGGTTTTTTTTTCTTATTTACTTCTGAAAGTTTATTT TCCTCGGCGGCATGCTCCACCTTGCCCTTCTTAGAGTGGCCTTCTTAGAGTGGCAGGTGTCAAATTGACCCTCTCAAAAT GTAAGCAACCACCCTCACCCCACTAGAACTCCACCGGTTCCTCTAGCATTGTCTTAACATCCGAGCGAGATGAAAGGATC GGCCAAGAAATGCAAATATAGAAAGTGAGTTTAAGAAAGGGTAGAGTTGAGCCATAAAAAAAAGTGGTTTAGCTGAGAAT GTGATTTGACCTGAGCTAGGGTCGCAGCCTGATGATTTGTGAGTCTCATGAGTAGGTAGTAGTTAATTACTCCACCTTCA TTACTCACGCATCCCTAGACTCTTCTTCAGGCTGCAACACTCTCTCTGAAGTCGGTAAACCACCATTTTTGTCTTTTCTC CTGCTCAACTTTACCCTTTCTCAAACTCTATTTCTTGTCACCGTTCTTTTCATCACTTTTCTCGCTCTTTCTCTCGCTAA TGGCAGAGATCCAATGGCTGGGGGTTCCGGTGCTCAGAAGAACCGGTGGAGTTCAAGTGGAGTGGGTGTGGTTGCTAAGA TTTGGTAGTGCCGATTTGACACCTGCCACAAGCAGTATGAAACGAAGGCTCTCAGTAAAGGAATGACTGCAGACGTCGTC GCTAGGATGAACATAAGAAAAAGCAGAGAGAGTCTAAGAAGGGCAAGGTGGAGGATGCATGTTCAGAGAGAAAGAAAATT GATTGATTGTGAATTGTAAAAAAATGAAGAAAAAAGAGGGAGTAATTGGATTAGACTTTTTAGTGACCTTGGTTTTATCA CTTTTGTGGACCTTAGGTTTTTTTGTTTCCTTATTTAGTTATGATATGAACTATTAGTGTGTGTGTTTGCGTTGTATGGA GGGGAAGGGAAGGACAATTACCTAGTGCTTTAAAGACTAACCTAATGCCAGGGCAAGGTCTAGGGAAAGCTTTATCATGC TTGCAAGAGGTTAATTCCTTAAAGTCAGCCTTGTTAGTACATGGTATGGTAGTAATTCCATCTGTTGTCCTCAAGGCTCG CCATCAAAGGAAAGGAAAAATGGAGTCTTAATTTTAGGAGTTAGAGTTGTATGATATAAAAATCAATAGAAAATGATTAG AAGACTTCATGAAGATATAGTTTTATTCCTTTAATTACAAAAAAATGTTGAAGTAGAGATTATTGAATTGAAATTACATG AAATGAATAATTTACTCTTCCTTTTTTCTCTCTTCATCTAAATTTCTCTATCCCAAACATACCCGTAGCCGTAGGTTTCC TTATAACTTGTAAGCTGTACTGCTTCTGAAGTTAATAATATACTAAACCTATAGGATTTATGTCTATTGATAATAAGATA GGATCAATAAACACTCAAAAACACACTTTTTTAGCAGTTTTGTTACACTCCATTCAAATCAAAGATGATGATGATGTATG TGTCACTACTTATGTGTGTTATGCCTGACATGACATCAATGGCATTTTCAAAATTTAGAATTTCTTTTTCGTCTTGTATG CAGTTGTAGTGCCATTTTTCTTATATTTCTGAAACTTAACTATGCCTAACTCTTGTTTCAGGCTCGAAAAAGGAAATTGG GTTTGCAAGAGGACGATGATAGTTCCAAAGTGGTTGTTAGTGATACTAAAGATTTTGCTACTGTTGGGAAGACCAGAGGT GTTTTTTATTAATGAGCTAAAAAATTGGTTTAGGTCAAATCTGTTTTGCCTCCACTAATTGCAGTTCTTGTATTCTTTTG CCATAGATACCTCTGATAGGGCCTTTTACAAGGATTTGGTAAAGGTCATTGAAGCCTCTGATGTTTTACTAGAGGTCCTT GATGCCCGAGATCCCTTGGGTACCCGTTGTATCGATATAGAAAAGATGGTGATGAAAATGGGACCTGATAAACATCTTGT GTTGCTTTTAAACAAAATTGGTAACTTCTATGCTTACCTTTTTTTCTCACTTTTCACCTTTTAGTAATATTTTTATATTT ACATTGACTAATCAATTGTGCTCTTAGATCTTGTCCCACGAGAAGCTGTAGAGAAGTGGCTCAAGTACCTTAGAGAAGAA TTACCTACTGTGGCTTTCAAGTGCAGCACCCAGCAACAAAGATCAAACCTAGGGTGGAAGTCTTCTAAAGCAGCCAAACC AAGTAATATTTTGCAATTAAGTGATTGTCTTGGAGCTGATACTCTCCTCAAATTGTTGAAGAATTACTCAAGAAGTCATG AGGTAACATATAATATGGAACAGTGATTTTTTTTGGTCCAAGTAGTGTTTTTTCTTGTAAAGTTGTTGAGTGTTTATTGG AAGTTCATGAGTCTTACGCTCAAGCTTTTCCTGCCCTTTCTCTTTATTGTCTTTGTTTATGTTTATGTATATGCTTCTTT CTCTACATTGATATATACGGTTTCATCTAAATTTCTAATTTTCTATTTTATTCAAGAATGGTTTGCAAGTGTTTATTGGA AGTAGTTGAATTGTAGTTCACCTACTTTTATCCTTTTGTGGTTCAGCAGTAATAGCTGCTTGTAAAATTATAATGTCAAA AGTTTGTGCTGTACTTGAGGTGCTTATTATGTAGAGTTGATACATGAGGTAGGATGTGATTTAGGCACCTCAGTAGTGAA CTGCTTATGGTTGCTCCCATGGAATTAGCATCTCAAATATGTAGAGATTATGTGGCCTTCCTGCGTTCTTAGTTTTTGTA TGTCGGGGGGGAGGGGATCTGGATCTCTTGAGATAGATTGGGATTTTTGAGAGTGCTAGGTTTGCTGTTGCTACAACTTG ATGCACTTCATACAAGTTTCTTACACATTTTGTAATGTGTATTCAATATGGGTATGGGAGTCAAATAGGCTTTGCTATTC TTAGTGTTTCTTGTATCATTTTTTTGCCATGCTAGTTTATTTGACTCATGTTTTTTAGGATTCCATCTACTGATAAGGAA ACTTAAACACGGGGACATGGTATTCCAATGCATCAAACAAAATATAAAATCTAAGTAAAAGATGTATAGTACTTTTGAGG AGTTTGTGCTTTTAATATAGTATATTACTGTTTTTTTATTAATTACAAAATAAAAATATGGTATATTACTGTATATACTT GAGGAGGAATGGAGAACCTATGCAATTTTCTTTTTATTCTATGCTTAATTCAGTTTAAAGAAATCTCTGTGGATGTGTAT TGTGCTCTTCTGGCATAAAAAGCAAAGAAAAAAGATACACATTGATGATGTCAACACTAGTTTGGACTTGGGATCTGATG TTAGAGAAACCTGTTTTTGTCTTATTATTGGCATCTGTATTTTCTATATTATGGATGCCCTTTTCATCTCATCAGCTTTA CTTTAATTTTCTATGTTTCCCTTTGATTGGTTTAAATTTATATCTTCGTTATTTAATATTCTTCCATTTGTTTGATTCTT CATCATCCTGCCTTTAAGGTTCAGGTATTCCATTATATTTTTATTTTCTACCTACTGGGTTCTAAACTATATTTAAATCT TCTAAGTTGGAAGGGTTGCTATGGTGTGCCTCCTTTAAGTGTTATTGCTATCCATCGGGGATTTTGCATTGGACTAATTA TATTCTTTTTCCCTAATACTTGCACCTTCTCTTCTAGTCTTATACTCTTAGTGCTTATCTGTTAATTGTTTTGTTATTTT TATGTTTGTTTATTTGATTTGAGACCATTTGTTGTCTATCTAAATTTAATTCATTTATTTTTGCATCCTTGTCTCGACAG ATCAAGAAGTCAATCACTGTGGGTTTGATTGGCCTGCCCAATGTTGGTAAGAGCAGTCTTATTAATAGCTTAAAGAGATG CCATGTTGTCAATGTTGGTGCTACTCCCGGGTTAACACGATCAATGCAAGAGGTTCAATTGGACAAAAATGTTAAATTGC TGGATTGCCCTGGTGTTGTTATGCTAAAGTCTCAAGAAAATGACAGTTCTATCGCATTAAAGAATTGCAAGAGAATTGAG AAATTAGATGATCCCATTAGCCCAGGTATTAAGGCATTTGTTCCCATTACTAATTAGTCTCTGCTTATTTAGGTTCTGTG TATTGTAGTAAAGATGTTGCAGTGGATGGTCAAAGCTTTGTTTGATTTTAATGTAAATAAAATAGGAAAAATCAGATGAA CTTGCAACATGGAAGAAATACACTTTTTACATCTATGAAAATGTGCAGTTTGTGTGTGTCATTCTTTGGTGCATTTGAAC TTAATCTTGGTAGTAGGATAAGTTTATGTTAGTTGCTTCTCTTTAATGTTTTCCTCATGGCAGTTTTTACTAGTTGCATT GGTCCCTTGGTACGTAGTTGATTTTTTGTTTTGGTGGATCTCTTATCTTCGATACATCCCTCCATTCTGTTTATAGATAT AAATTGAAGTTCTCTCTATTGAAGTTGTGGAAGTCTACTCTCAAGTGCTTTGAAGTTGGCACCTTAACACTTTTTTGTAT TTATGAGAACCTTAATGTTGAAATCCTGACTTCCAAGCTATATTGGTAAATCTAATTCTGTCCTTCATGGACAATGCAGT GAAGGAGATTCTCAAGCTTTGTCCGTCCAAGCTGCTGGTAACTCTGTATAAGATTCCAAGTTTTGATTCTGTTGATGACT TCCTACAGAAGGTTTCTACAGTTAGGGGCAAGCTCAAGAAGGGTGGAATAGTTGACACTGAAGCTGCTGCCAGAATTGTT CTTCATGATTGGAATGAAGGTATACATAGTGAAAATTGTTAGAGCATAAACAGTGAGAAAGGGAACATGTTTCTTTTGAT ATTAAAAATTAGAAACAGCTTGATGTTACACTAAACTAAGAGAAATGTCTACTTGCATCTTTCAGGTAAAATTCCATATT ATACCATGCCCCCAGTTAGGGATCAAGGGGTACCTTCAGAGGCCAAGATAGTTTCAGAGTTTTCCAAAGAATTTAACATT GATGAAGTCTACAATAGTGAATCTTCATTTATTGGGAGTCTTAAATCTGCTGATGCCTTCGATCCTGTTGAAGTTCCGTC AAGTGGCCCTCTCAACCTTGATGAGGCAATGTTAGAGGTCTGTTTTTATTTTGCTGTTTTAAAGACCTTCAAAGTAGGAG AAAATGCCTTGGAAGTGACATACACCATAGGGTTTATTTTATTCTTCACTCAGTTTTACTCTTTTCAATATATTATTTAA AATATACTATCCTCTTACATGCTATTTTTTCTTAGGATGATCAACAAGTTAAACCTTCAGAACAAGAGGATCCTGAAGAC ATGTCTGACAATGATAATGATGAAGCTATGGAAGATGATAACGAGGATGCCAGCAAGAACAAGGGGAACAGTGCAGCTAG TAGACAAAATGAGAAATTATACACAGCCGATGGTATACTTAATCCAAAACTTAAGCGAGCAGAGAAGAAGAAAAGGAAAA AGGATAAAAAAGCATCATCAGATCCCATGGATGATGATTATGACTTCAAAGTTGATTACTTCAAAAAGGGAGCCACAATG GATGCTGAAGAGAGCAACAATGAGGATGAAGATGATGAACAAGTCAGCTCTGAGGTGCCCATGTCTGGTATTGAGGTTGA TGAATGATTAGGAAGTGTTAAAAGAGAGTGTTACTAGCATTTTTCTACCTATGTATGGGTGGCAGTGGCAATTTTGATAC ATGCACTAGTTCTTTTTAATTGTGGAAAGACATGAATATTTGTACCTTCTATTTGCTGTTTAATTAACTTGCATATAGTT TTCATTATCTTCTAATGGTAATTTTCTTTTCCTTTTATTTTTAACAATATAGTAAATTGTGAATGGTATTGTAGTGCTAA CATTAACATTATATATTAATAAACTAACAAATACTACTGCTTGAAGTGTAAAATATAACTTAGCGGACAGATTATTTATA GATCATTTTGGTAAAAAGCATTAATTTAGGGTGAGGGAATTATGCCACAATAGGATGGAGGGACAGCTGACGGGCTTAAT GAAGCACTTACGGTGTATTTATATTCACCTTACTCCAAGGGAATGAGTTAGGTTTCAAACTTGTGTCAAATTCAAGAGTA TATAAAAAGTACTCCCTCCGGTCTTATTTATAAGCAACAAAAAAAAAA
CDS sequence (LotjaGi6g1v0178700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGAAGAGCAAGAAGAGCAAGAGCAAGAGGGTTCCATTGAAGAAGAAGTATAAGATCATAAAGAAGGTGAAGGA GCACAAGAAGAAACAGGCCAAGGAAGCCAAAAAGCTTACTTTGAATGGTAAGAAGAAGGTTGAGAAGGATCCTGGTATCC CCAATGATTGGCCCTTCAAGGAGCAGGAGTTGAAGGCCCTTGAAGCTCGCCGGGCTCGCGCTATTGACGAATTGGAGCAA AAGAAAGCTGACCGCAAGGAAAGGGCTCGAAAAAGGAAATTGGGTTTGCAAGAGGACGATGATAGTTCCAAAGTGGTTGT TAGTGATACTAAAGATTTTGCTACTGTTGGGAAGACCAGAGATACCTCTGATAGGGCCTTTTACAAGGATTTGGTAAAGG TCATTGAAGCCTCTGATGTTTTACTAGAGGTCCTTGATGCCCGAGATCCCTTGGGTACCCGTTGTATCGATATAGAAAAG ATGGTGATGAAAATGGGACCTGATAAACATCTTGTGTTGCTTTTAAACAAAATTGATCTTGTCCCACGAGAAGCTGTAGA GAAGTGGCTCAAGTACCTTAGAGAAGAATTACCTACTGTGGCTTTCAAGTGCAGCACCCAGCAACAAAGATCAAACCTAG GGTGGAAGTCTTCTAAAGCAGCCAAACCAAGTAATATTTTGCAATTAAGTGATTGTCTTGGAGCTGATACTCTCCTCAAA TTGTTGAAGAATTACTCAAGAAGTCATGAGATCAAGAAGTCAATCACTGTGGGTTTGATTGGCCTGCCCAATGTTGGTAA GAGCAGTCTTATTAATAGCTTAAAGAGATGCCATGTTGTCAATGTTGGTGCTACTCCCGGGTTAACACGATCAATGCAAG AGGTTCAATTGGACAAAAATGTTAAATTGCTGGATTGCCCTGGTGTTGTTATGCTAAAGTCTCAAGAAAATGACAGTTCT ATCGCATTAAAGAATTGCAAGAGAATTGAGAAATTAGATGATCCCATTAGCCCAGTGAAGGAGATTCTCAAGCTTTGTCC GTCCAAGCTGCTGGTAACTCTGTATAAGATTCCAAGTTTTGATTCTGTTGATGACTTCCTACAGAAGGTTTCTACAGTTA GGGGCAAGCTCAAGAAGGGTGGAATAGTTGACACTGAAGCTGCTGCCAGAATTGTTCTTCATGATTGGAATGAAGGTAAA ATTCCATATTATACCATGCCCCCAGTTAGGGATCAAGGGGTACCTTCAGAGGCCAAGATAGTTTCAGAGTTTTCCAAAGA ATTTAACATTGATGAAGTCTACAATAGTGAATCTTCATTTATTGGGAGTCTTAAATCTGCTGATGCCTTCGATCCTGTTG AAGTTCCGTCAAGTGGCCCTCTCAACCTTGATGAGGCAATGTTAGAGGATGATCAACAAGTTAAACCTTCAGAACAAGAG GATCCTGAAGACATGTCTGACAATGATAATGATGAAGCTATGGAAGATGATAACGAGGATGCCAGCAAGAACAAGGGGAA CAGTGCAGCTAGTAGACAAAATGAGAAATTATACACAGCCGATGGTATACTTAATCCAAAACTTAAGCGAGCAGAGAAGA AGAAAAGGAAAAAGGATAAAAAAGCATCATCAGATCCCATGGATGATGATTATGACTTCAAAGTTGATTACTTCAAAAAG GGAGCCACAATGGATGCTGAAGAGAGCAACAATGAGGATGAAGATGATGAACAAGTCAGCTCTGAGGTGCCCATGTCTGG TATTGAGGTTGATGAATGA
Protein sequence (LotjaGi6g1v0178700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKKSKKSKSKRVPLKKKYKIIKKVKEHKKKQAKEAKKLTLNGKKKVEKDPGIPNDWPFKEQELKALEARRARAIDELEQ KKADRKERARKRKLGLQEDDDSSKVVVSDTKDFATVGKTRDTSDRAFYKDLVKVIEASDVLLEVLDARDPLGTRCIDIEK MVMKMGPDKHLVLLLNKIDLVPREAVEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKAAKPSNILQLSDCLGADTLLK LLKNYSRSHEIKKSITVGLIGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSQENDSS IALKNCKRIEKLDDPISPVKEILKLCPSKLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGK IPYYTMPPVRDQGVPSEAKIVSEFSKEFNIDEVYNSESSFIGSLKSADAFDPVEVPSSGPLNLDEAMLEDDQQVKPSEQE DPEDMSDNDNDEAMEDDNEDASKNKGNSAASRQNEKLYTADGILNPKLKRAEKKKRKKDKKASSDPMDDDYDFKVDYFKK GATMDAEESNNEDEDDEQVSSEVPMSGIEVDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 570 | 570 | 0.0 | – | |
| PANTHER | 1 | 570 | 570 | 0.0 | – | |
| Pfam | 16 | 91 | 76 | 9.7E-17 | ||
| Coils | 22 | 42 | 21 | - | – | |
| MobiDBLite | 25 | 58 | 34 | - | – | |
| MobiDBLite | 34 | 58 | 25 | - | – | |
| Coils | 64 | 84 | 21 | - | – | |
| SUPERFAMILY | 126 | 358 | 233 | 2.42E-38 | ||
| ProSiteProfiles | 128 | 312 | 185 | 40.829 | ||
| Gene3D | 128 | 312 | 185 | 1.1E-46 | – | |
| CDD | 139 | 309 | 171 | 6.68806E-111 | – | |
| PRINTS | 257 | 277 | 21 | 2.6E-7 | ||
| Pfam | 257 | 318 | 62 | 3.4E-14 | ||
| PRINTS | 303 | 318 | 16 | 2.6E-7 | ||
| Gene3D | 327 | 401 | 75 | 7.1E-10 | ||
| MobiDBLite | 470 | 592 | 123 | - | – | |
| MobiDBLite | 482 | 497 | 16 | - | – | |
| MobiDBLite | 538 | 567 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0178700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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