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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0184400 |
| Transcript ID | LotjaGi6g1v0184400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT3G59030.1 MATE efflux family protein; Swiss-Prot: sp|Q9LYT3|DTX41_ARATH Protein DETOXIFICATION 41; TrEMBL-Plants: tr|A0A151R413|A0A151R413_CAJCA Protein DETOXIFICATION; Found in the gene: LotjaGi6g1v0184400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47804636..47807231) extracted from Lotus japonicus Gifu genome v1.2.
AATGAGCTTGGAAAACGGATACCAACCGTTACTCCTCAGGCTTGACTCACACTCTAGCATCCCAGACTTGTCACCGGACA CCATAGAAGAGTTTTTGGAAAATGGACCAATTGAGTTGAGATGGTGGCCTCGGCTTGTTGCTTGGGAATCAAGGCTCCTT TGGATCCTCTCTGGGGCTTCCATTGTTGTCTCAATTTTCAATTACATGCTGAGTTTTGTGACACTCATGTTTACTGGCCA TCTGGGGTCTCTTGAGCTTGCTGGGGCATCTATAGCTGCAGTTGGAATTCAGGGTCTTGCTTATGGGATTATGGTATGCT TCTTTTAATTTATTACCAATAACAATACTGAGGCATATAAATAGTGCAGACACCCAACAGACACATCATTTTTCTCTCTA TTTCTCTCTTTGACTACATATCACATCCACTACTTCTCTCTTCTCATCATTTCTCACTCTGAACATCTATTGGATATTTG CCTTGTGAGGATATCTATAAATTGTTTTCACTAAAAATGTTGTCTCTTACACAACTTTCAAGAAGTATAGAAGCAATACC TTTATTTGAATGAGATACATGTAGTAAATGTGGATTGGTATTAGTATAAGATACAATTCAGTATAGATCAGAAGTTGAAG AAATTGATGTGTATAGGTTCAATTTTAGAGTGGAATAGTCTAATAGCATGTTTGCATTAACTTATTTTGCTTGGAAACAA TTTTGACACGCAGAAGCTACTCATGTAGTCATGTAAGCTTCTCCCCATAGTTGTTTTGGTTTTTGAATGAATTATAAGAG AATTCCCAAATGTGCACTAAGACGGTAAATATGATTTTTATTTTTTAGTGAATTCAAGTACATTGTTTTCATTTATATTC ACTGAGGGTAGTTTTTTTTTTGTCTTCAACTTGATTTTAAATTTGTGAATTTGACTACTGAATTCTCCTTAAACAGTTGG GGATGGCAAGTGCAGTGCAAACTGTGTGTGGGCAAGCATATGGGGCAAAAAAATATTCCGCAATGGGCATGATATTGCAA AGAGCAATCATCTTACACTTGGGAGCTGCAGTGATTCTCACATTTCTCTATTGGTTCTCAGGGCCCTTTCTAAAAGCCAT AGGGCAGTCAGATAGCATAGCTGAACAAGGCCAAATTTTTGCTCATGGAATCATTCTTCAACTCTATGCATTTGCACTCT GCTGCCCAATGCAGAGGTTCCTCCAAGCACAGAACATTGTAAATCCTCTGGCATATATGTCAGTTGGGGTCTTCCTTCTG CATGTGCTTCTCAGCTGGCTAGTTGTCTATGTTTTGGACTATGGACTTCTTGGTGCTGCCTTTACTCTTAGCTTTTCTTG GTGGCTTCTTGTCATTTTAAATGGTTCCTACATCATTTTTAGCCCAAGATGTAAGCAAACTTGGACTGGCTTCACTATAA AAGCCTTCAAAGGAATTTGGCCTTATTTCAAGCTCACAATGGCTTCTGCTGTGATGTTATGGTACAAACCAAAAGTCTTC CTAATTCTTACTCTCTTGCATATACAAACACGCACACACACACACACACACATTAATCAACATACATGCTTGATTCTCCT TGAGAAATATCTCAGGTTCAAGTCTTCTGTTTTTGGAAAGAAAGCTCTGTTGTGAGAGCTAGCCCTACTAGAATGTAAAT ATTCAGAGCTCGAACGGGATTGTATCCCATGAAAAATATGTGTTAGATCCAAACACACACACCCCAAACATCAATTATAA AAGTGTATATCTTAAGTTCACATTTTCTTTTTTCTTTAACAAGCTGAAAACTCATTTTAATGTAGTTTGGAGATATGGTA CAATCAAGGACTAGTACTTATATCTGGGTTACTATCCAATCCTACAATCGCACTGGACACTATTTCCATTTGGTATGTTA TTAGTTATCTTTGAGTATAACCTTTCTTGGTAAAGCTAATTATCATCTTGTTATCTAACCATAATTTCCATGCCTTCCAT CTCAATGTACTTTCAGTATGAACTATTTGAACTGGGACATGCAATTTATGTTGGGCCTAAGTGCAGCAGCCAGGTTAGTA ACAAGACAATAAGAGTATCCATTAAAACAATCCCCCCATACAAACATGTTAGTTGCTGGTTGTGTGATTGCAGTGTTCGA GTTAGCAATGAATTAGGAGCAGCTCATCCAAGAGTTGCAAGATTTTCTGTCTTTGTAGTGAACGGAACCAGCATTCTTAT CAGTATAGTTTTCTGTGCAATCATTTTGATTTTCCGTGTTAGTTTGAGCAAGCTTTTCACTACTGACTCTGCAGTCATTG AGGATGTATCTAGTTTGACTCCATTGCTTGCCATCTCTGTTTTTCTAAATGGCATTCAACCAATACTTTCGGGTAACAAA ATCTATAAGCATGACATGAACAACATTTTTTGCTTATGAACAACACTTAGGTCACATTTTATTTGGGAAATTTCAGGAGT TGCAATTGGAAGTGGGTGGCAAGCAGTAGTGGCTTATGTAAACTTGGCTTCTTACTATGTCATCGGTCTTACCGTTGGAT GTGTTCTTGGCTTTAAAACAACTTTAGGAGTAGCTG
CDS sequence (LotjaGi6g1v0184400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTTGGAAAACGGATACCAACCGTTACTCCTCAGGCTTGACTCACACTCTAGCATCCCAGACTTGTCACCGGACAC CATAGAAGAGTTTTTGGAAAATGGACCAATTGAGTTGAGATGGTGGCCTCGGCTTGTTGCTTGGGAATCAAGGCTCCTTT GGATCCTCTCTGGGGCTTCCATTGTTGTCTCAATTTTCAATTACATGCTGAGTTTTGTGACACTCATGTTTACTGGCCAT CTGGGGTCTCTTGAGCTTGCTGGGGCATCTATAGCTGCAGTTGGAATTCAGGGTCTTGCTTATGGGATTATGTTGGGGAT GGCAAGTGCAGTGCAAACTGTGTGTGGGCAAGCATATGGGGCAAAAAAATATTCCGCAATGGGCATGATATTGCAAAGAG CAATCATCTTACACTTGGGAGCTGCAGTGATTCTCACATTTCTCTATTGGTTCTCAGGGCCCTTTCTAAAAGCCATAGGG CAGTCAGATAGCATAGCTGAACAAGGCCAAATTTTTGCTCATGGAATCATTCTTCAACTCTATGCATTTGCACTCTGCTG CCCAATGCAGAGGTTCCTCCAAGCACAGAACATTGTAAATCCTCTGGCATATATGTCAGTTGGGGTCTTCCTTCTGCATG TGCTTCTCAGCTGGCTAGTTGTCTATGTTTTGGACTATGGACTTCTTGGTGCTGCCTTTACTCTTAGCTTTTCTTGGTGG CTTCTTGTCATTTTAAATGGTTCCTACATCATTTTTAGCCCAAGATGTAAGCAAACTTGGACTGGCTTCACTATAAAAGC CTTCAAAGGAATTTGGCCTTATTTCAAGCTCACAATGGCTTCTGCTGTGATGTTATGTTTGGAGATATGGTACAATCAAG GACTAGTACTTATATCTGGGTTACTATCCAATCCTACAATCGCACTGGACACTATTTCCATTTGTATGAACTATTTGAAC TGGGACATGCAATTTATGTTGGGCCTAAGTGCAGCAGCCAGGAGTTGCAATTGGAAGTGGGTGGCAAGCAGTAGTGGCTT ATGTAAACTTGGCTTCTTACTATGTCATCGGTCTTACCGTTGGATGTGTTCTTGGCTTTAA
Protein sequence (LotjaGi6g1v0184400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLENGYQPLLLRLDSHSSIPDLSPDTIEEFLENGPIELRWWPRLVAWESRLLWILSGASIVVSIFNYMLSFVTLMFTGH LGSLELAGASIAAVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYSAMGMILQRAIILHLGAAVILTFLYWFSGPFLKAIG QSDSIAEQGQIFAHGIILQLYAFALCCPMQRFLQAQNIVNPLAYMSVGVFLLHVLLSWLVVYVLDYGLLGAAFTLSFSWW LLVILNGSYIIFSPRCKQTWTGFTIKAFKGIWPYFKLTMASAVMLCLEIWYNQGLVLISGLLSNPTIALDTISICMNYLN WDMQFMLGLSAAARSCNWKWVASSSGLCKLGFLLCHRSYRWMCSWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| PANTHER | 6 | 334 | 329 | 1.2E-182 | – | |
| PANTHER | 6 | 334 | 329 | 1.2E-182 | – | |
| CDD | 49 | 333 | 285 | 4.68239E-93 | – | |
| Phobius | 52 | 77 | 26 | - | – | |
| TMHMM | 54 | 76 | 23 | - | – | |
| Pfam | 60 | 219 | 160 | 4.3E-29 | ||
| Phobius | 78 | 88 | 11 | - | – | |
| Phobius | 89 | 110 | 22 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 111 | 129 | 19 | - | – | |
| Phobius | 130 | 151 | 22 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 152 | 170 | 19 | - | – | |
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 171 | 190 | 20 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| Phobius | 202 | 224 | 23 | - | – | |
| Phobius | 225 | 229 | 5 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 230 | 252 | 23 | - | – | |
| Phobius | 253 | 272 | 20 | - | – | |
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 273 | 291 | 19 | - | – | |
| Phobius | 292 | 296 | 5 | - | – | |
| Phobius | 297 | 319 | 23 | - | – | |
| Phobius | 320 | 366 | 47 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0184400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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