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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0186700 |
| Transcript ID | LotjaGi6g1v0186700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT3G44900.1 cation/H+ exchanger 4; Swiss-Prot: sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4; TrEMBL-Plants: tr|K7N1I5|K7N1I5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0186700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48050446..48053861) extracted from Lotus japonicus Gifu genome v1.2.
GTGACATCGAAGCATGCATGATACCGCAAATTAACCAATTGCCAATTTGTAACGTCTAAAGGTTCTTCTTCACGTTGCCC TGTTAAATCTCTAATTCTACAACTCTTCCTATATCTCACTAATCCTCATCCTTAATTTCTTTCTTTCCATCAATCTCTTC TTCTTCATTTTATTGTTACATGCCTTGTTCTCTGGGGGCGAGCAAGTGCATGCAACCAAAATGGACCCCAACCAAACGTT ATTCTCTGTGGTCACGTTAATGCCCCAAGAAGATCCCAGCCTGGATCGAATCCAAGTCTACAACGTGTGTATACAACAGC CACTGAAATTAATTTCAGATGGCTTGTGGGCTCATGAAAATTTGATTCCATCCAAATCTTCATACACAATGCTTGAGATG CAAATCTTGGTCATTTTCTTCATCACCCAAAGCTTCCATTTCCTCCTCAAGCGTTTAGGGTTCCCTTATTTGGCCTCCCA AGTATTGGCTGGGTTTCTGCTAGGCCCGTCAATTCCGACGGGCCCATTGGAGGCATATAAGAAGATGTTGTTCCCGTTCG GAAGCCCGGACATCCTGAACACCATCTCCTCCTTCGGCTACACCTTCTACCTCTTCCTCAACTCTGTTCAGATGGATTTC AACTTAATCACCAAGACGGGTAAAAAAGCTTGGGTCATCGCCCTCCTCAACATGTTCACCCCCATCATTCTCGCCGGCGG CGTCTTCGTCCAATCTTTCAACCCCTTATGGACCTCCACACTCGGCCAGAAGGAAGCTGATGACCTCTCCGTCATCACCA TCTCCCAGAGCGGCTGCTCCTTTGCCGTCATCGCCTGCATGCTCAATGAGCTCGGCGTCATCAACTCCGAGCTCGGTCGC CTCGCGCTCTCCACCGCCTTCATCAATGACCTCACAGGTGGGATGATGGCCGGCCTCGGCACCGCCTTCGTGACCTCCGT CTCGCAGGGCTACCTCATGGTGGCCCGCAACCTCTTCCTCTTCTTCGTGTACCTCACTATGATCCCTCTAGTCGGCCACC CTGTGATGAAGTGGATGGTGAGGAGCACGCCAGAGGGGCGGCCGGTGAGGAGGATATACATCGTAGCCATCGTGTTCGTG TTGTTCATACTCAGCCACATTGCGAAGTATTTCAACCAACCGTTCATGTCAGGGGCGGTGATCCTAGGGCTGACAGTCCC TCCAGGACCGCCGCTCGGGTCCGAGCTGGTCGACCGGATGGAGTTAATCTCGACGTGGTTCCTATCACCTCTCTTCGTGA CGTGCTGCGCCATGAAGATAGACCTCACCATATGTGGGCCTCCCAAGTTCGTGTTGGCGGTTGCGTTCATCATCGCGATC ACCCACGTGATCAGGCAAGCGCAGATCGTTGCAATCTGCCAATATTGCAAGATCCCCGCACGCGATGGTTTCTGCCTCGC TCTCATCTTGAGCTGCAAGGGCATCGTGGATATCTGCTCCTACATCCTTCTCTTCGACGGAACGGTAGGTGTATGTTTGC ACTTTAGTTACTTAAATTTAAGGACACACTCTAACACACTCATTGTAATTTATTTATTTTTTAAAGGTCAACACATTTTC TTTTAATAAACCAATCATAATGTTGAAGTGTGTCCTAGCATTCCTAATGAAGCTCCATACTCCCTTTGATTCATGTAACA TTTAATCTTCTAACTATTAGCAAATTTATTTCTAATGCAGCAACAATCTCCAACAGTAGTAGCAGTGATGGTGATCTCAG TGTTAGTCTTGGGAACAACCTCGCGGGTGGGTGTGAAGTCACTATATGACCCTTCAAGAAAATATGCAGGATACCAGAAA AGAAACATCATGAATCTCAAGAAAAACTCAGAGCTTCGTGTCGTAGCATGCGTCCACAAGCCAAGCCACATGATCCACAT CAAGAATTTCCTCCAAGTTTGTTCTCCTACACTAGACAATCCTCTAGTGGTGGACGTTTTGCATCTCATGGAGCTCATCG GAAGAAGCTCACCCATTTTCATCGCGCATCGCCTCCAGCAAAAAACACAGTCCACACCCAACTACTCCGGCGAACTCATC GTGATCTTTGACCTCTTCGAGCGTGACCATGCCGGTTCTGCCACGGCCAACACCTACACTGCCATATCCCCAGTGTCCCT CTTGCATGAGGATGTATGTAATCTTGCACTGGACAAGATGGCGTCCATCATAATCCTCCCATTTCATGTGAGGTGGACGG AGAAGGGTTTAATCGAGTCAGAGGACAACAAAATAAGGTCATTGAACCACAAAGTTTTAGAAAGGGCACCGTGTTCGATC GGGATCCTTGTGAACCACAGTTCTTCGAGCCAAAACTCGGTGAGTTATAAAGTGGCAATGGTTTTTCTTGGTGGGCCGGA TGATAGAGAAGCCTTGGCTTTGGCAAAGAGGTTTGCTAGCAATTTAGATAACAAGTTGTTCGTGTATCGCTTCGTTTCAC ACGAGCATGATTCCACAAACTGGGAAAACATGATTGACAACGAGGAATTGAGGGAGGTGCGTGGAGCTTTTGGCAAGGTT GAAAATGTTACATATGAAGAAAAATCAATAGATGATGCTTCACAAACGACAGAGTTATTGAGAGATGTGGCAAATAGTAA GTTTGATTTTATTATAGTTGGGAGAAGGAATGGGGTGAAATCTGAAATGACAGCCGGGTTGGAAAACTGGACAGAATATA CAGAATTGGGGGTGATAGGGGATTTGCTTGCTTCTCCGGATATGGAGACTAAAGCTTCTATTTTAGTTGTGCAGCAACAA CAAACCAAGGTTTTGACGGCATCATGACCACAGTTTCAAGCTAATTGGCATCACTTTTTTTGTACATTTCCAAATTTTCT AGTTTTGTAATTTCAGGCTTATGTATATTTGTTTTAATTTCATCAGGTTCTAATGTTCTGGCTAGCTTTTTCTCCATATT AAAGTGGGAGATTTAGAGAACTTTTTCTTAACATTAACTACTGATGTTGTTGTAAACTTAATGAAAAGTACCCTAAGCAA GGGATTCTGACTTCTGAGTATCAATGATCTACCCATTAAATGCAAGCTATAAGGATAGTTTTCAAAGTCCCACATTATTC CTAATTAAGATGAATGTAGACTTTATAAATGCATGAGACAGGTTGCATCATGCCAGCTTTTAGGTGCTTGTCACCCAGGT GGTCATAATTATTTTCCTTCAATCTGGCTCTGGAGGCACTAATTTGTTGAAACATCTCTCTCACAGAGAAGGGAAAGGAT GCTTGGTTTGCCAACCACCAATTCTGAAATTGGTCTTGTGACCCATCACCCATAAGAGACTGCATTGTTTTTTTCACAAG CCTCCATATATTCATGGTGTTGGGGCAGTATGTTACTCTGCTGTAAAATTGTAAAT
CDS sequence (LotjaGi6g1v0186700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCCCAACCAAACGTTATTCTCTGTGGTCACGTTAATGCCCCAAGAAGATCCCAGCCTGGATCGAATCCAAGTCTA CAACGTGTGTATACAACAGCCACTGAAATTAATTTCAGATGGCTTGTGGGCTCATGAAAATTTGATTCCATCCAAATCTT CATACACAATGCTTGAGATGCAAATCTTGGTCATTTTCTTCATCACCCAAAGCTTCCATTTCCTCCTCAAGCGTTTAGGG TTCCCTTATTTGGCCTCCCAAGTATTGGCTGGGTTTCTGCTAGGCCCGTCAATTCCGACGGGCCCATTGGAGGCATATAA GAAGATGTTGTTCCCGTTCGGAAGCCCGGACATCCTGAACACCATCTCCTCCTTCGGCTACACCTTCTACCTCTTCCTCA ACTCTGTTCAGATGGATTTCAACTTAATCACCAAGACGGGTAAAAAAGCTTGGGTCATCGCCCTCCTCAACATGTTCACC CCCATCATTCTCGCCGGCGGCGTCTTCGTCCAATCTTTCAACCCCTTATGGACCTCCACACTCGGCCAGAAGGAAGCTGA TGACCTCTCCGTCATCACCATCTCCCAGAGCGGCTGCTCCTTTGCCGTCATCGCCTGCATGCTCAATGAGCTCGGCGTCA TCAACTCCGAGCTCGGTCGCCTCGCGCTCTCCACCGCCTTCATCAATGACCTCACAGGTGGGATGATGGCCGGCCTCGGC ACCGCCTTCGTGACCTCCGTCTCGCAGGGCTACCTCATGGTGGCCCGCAACCTCTTCCTCTTCTTCGTGTACCTCACTAT GATCCCTCTAGTCGGCCACCCTGTGATGAAGTGGATGGTGAGGAGCACGCCAGAGGGGCGGCCGGTGAGGAGGATATACA TCGTAGCCATCGTGTTCGTGTTGTTCATACTCAGCCACATTGCGAAGTATTTCAACCAACCGTTCATGTCAGGGGCGGTG ATCCTAGGGCTGACAGTCCCTCCAGGACCGCCGCTCGGGTCCGAGCTGGTCGACCGGATGGAGTTAATCTCGACGTGGTT CCTATCACCTCTCTTCGTGACGTGCTGCGCCATGAAGATAGACCTCACCATATGTGGGCCTCCCAAGTTCGTGTTGGCGG TTGCGTTCATCATCGCGATCACCCACGTGATCAGGCAAGCGCAGATCGTTGCAATCTGCCAATATTGCAAGATCCCCGCA CGCGATGGTTTCTGCCTCGCTCTCATCTTGAGCTGCAAGGGCATCGTGGATATCTGCTCCTACATCCTTCTCTTCGACGG AACGCAACAATCTCCAACAGTAGTAGCAGTGATGGTGATCTCAGTGTTAGTCTTGGGAACAACCTCGCGGGTGGGTGTGA AGTCACTATATGACCCTTCAAGAAAATATGCAGGATACCAGAAAAGAAACATCATGAATCTCAAGAAAAACTCAGAGCTT CGTGTCGTAGCATGCGTCCACAAGCCAAGCCACATGATCCACATCAAGAATTTCCTCCAAGTTTGTTCTCCTACACTAGA CAATCCTCTAGTGGTGGACGTTTTGCATCTCATGGAGCTCATCGGAAGAAGCTCACCCATTTTCATCGCGCATCGCCTCC AGCAAAAAACACAGTCCACACCCAACTACTCCGGCGAACTCATCGTGATCTTTGACCTCTTCGAGCGTGACCATGCCGGT TCTGCCACGGCCAACACCTACACTGCCATATCCCCAGTGTCCCTCTTGCATGAGGATGTATGTAATCTTGCACTGGACAA GATGGCGTCCATCATAATCCTCCCATTTCATGTGAGGTGGACGGAGAAGGGTTTAATCGAGTCAGAGGACAACAAAATAA GGTCATTGAACCACAAAGTTTTAGAAAGGGCACCGTGTTCGATCGGGATCCTTGTGAACCACAGTTCTTCGAGCCAAAAC TCGGTGAGTTATAAAGTGGCAATGGTTTTTCTTGGTGGGCCGGATGATAGAGAAGCCTTGGCTTTGGCAAAGAGGTTTGC TAGCAATTTAGATAACAAGTTGTTCGTGTATCGCTTCGTTTCACACGAGCATGATTCCACAAACTGGGAAAACATGATTG ACAACGAGGAATTGAGGGAGGTGCGTGGAGCTTTTGGCAAGGTTGAAAATGTTACATATGAAGAAAAATCAATAGATGAT GCTTCACAAACGACAGAGTTATTGAGAGATGTGGCAAATAGTAAGTTTGATTTTATTATAGTTGGGAGAAGGAATGGGGT GAAATCTGAAATGACAGCCGGGTTGGAAAACTGGACAGAATATACAGAATTGGGGGTGATAGGGGATTTGCTTGCTTCTC CGGATATGGAGACTAAAGCTTCTATTTTAGTTGTGCAGCAACAACAAACCAAGGTTTTGACGGCATCATGA
Protein sequence (LotjaGi6g1v0186700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPNQTLFSVVTLMPQEDPSLDRIQVYNVCIQQPLKLISDGLWAHENLIPSKSSYTMLEMQILVIFFITQSFHFLLKRLG FPYLASQVLAGFLLGPSIPTGPLEAYKKMLFPFGSPDILNTISSFGYTFYLFLNSVQMDFNLITKTGKKAWVIALLNMFT PIILAGGVFVQSFNPLWTSTLGQKEADDLSVITISQSGCSFAVIACMLNELGVINSELGRLALSTAFINDLTGGMMAGLG TAFVTSVSQGYLMVARNLFLFFVYLTMIPLVGHPVMKWMVRSTPEGRPVRRIYIVAIVFVLFILSHIAKYFNQPFMSGAV ILGLTVPPGPPLGSELVDRMELISTWFLSPLFVTCCAMKIDLTICGPPKFVLAVAFIIAITHVIRQAQIVAICQYCKIPA RDGFCLALILSCKGIVDICSYILLFDGTQQSPTVVAVMVISVLVLGTTSRVGVKSLYDPSRKYAGYQKRNIMNLKKNSEL RVVACVHKPSHMIHIKNFLQVCSPTLDNPLVVDVLHLMELIGRSSPIFIAHRLQQKTQSTPNYSGELIVIFDLFERDHAG SATANTYTAISPVSLLHEDVCNLALDKMASIIILPFHVRWTEKGLIESEDNKIRSLNHKVLERAPCSIGILVNHSSSSQN SVSYKVAMVFLGGPDDREALALAKRFASNLDNKLFVYRFVSHEHDSTNWENMIDNEELREVRGAFGKVENVTYEEKSIDD ASQTTELLRDVANSKFDFIIVGRRNGVKSEMTAGLENWTEYTELGVIGDLLASPDMETKASILVVQQQQTKVLTAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 54 | 54 | - | – | |
| PANTHER | 4 | 789 | 786 | 0.0 | – | |
| PANTHER | 4 | 789 | 786 | 0.0 | – | |
| Phobius | 55 | 76 | 22 | - | – | |
| Gene3D | 57 | 463 | 407 | 1.2E-47 | ||
| TMHMM | 57 | 76 | 20 | - | – | |
| Pfam | 65 | 448 | 384 | 1.0E-27 | ||
| Phobius | 77 | 80 | 4 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 81 | 98 | 18 | - | – | |
| Phobius | 99 | 117 | 19 | - | – | |
| Phobius | 118 | 138 | 21 | - | – | |
| TMHMM | 118 | 137 | 20 | - | – | |
| Phobius | 139 | 149 | 11 | - | – | |
| TMHMM | 150 | 172 | 23 | - | – | |
| Phobius | 150 | 169 | 20 | - | – | |
| Phobius | 170 | 188 | 19 | - | – | |
| Phobius | 189 | 209 | 21 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| Phobius | 221 | 244 | 24 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 245 | 249 | 5 | - | – | |
| Phobius | 250 | 271 | 22 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 272 | 291 | 20 | - | – | |
| TMHMM | 292 | 311 | 20 | - | – | |
| Phobius | 292 | 308 | 17 | - | – | |
| Phobius | 309 | 313 | 5 | - | – | |
| Phobius | 314 | 333 | 20 | - | – | |
| Phobius | 334 | 344 | 11 | - | – | |
| Phobius | 345 | 364 | 20 | - | – | |
| TMHMM | 360 | 382 | 23 | - | – | |
| Phobius | 365 | 369 | 5 | - | – | |
| Phobius | 370 | 392 | 23 | - | – | |
| Phobius | 393 | 403 | 11 | - | – | |
| TMHMM | 403 | 425 | 23 | - | – | |
| Phobius | 404 | 425 | 22 | - | – | |
| Phobius | 426 | 430 | 5 | - | – | |
| Phobius | 431 | 453 | 23 | - | – | |
| TMHMM | 435 | 453 | 19 | - | – | |
| Phobius | 454 | 796 | 343 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0186700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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