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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0188800 |
| Transcript ID | LotjaGi6g1v0188800.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G10270.1 cyclin-dependent kinase C;1; Swiss-Prot: sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1; TrEMBL-Plants: tr|I1JIS7|I1JIS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0188800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48402662..48408327) extracted from Lotus japonicus Gifu genome v1.2.
CTTATTCATCACTACATATTGAGAAAGAAGTGTGAAAGTGAAACCCATATAAACCCATAGCAAGAAGAAACTCATCACCT ATTGTATTTGCAGCCTCTATCTGCTGCACACTTCGATTCCCAATCCCATTCTCCTTTTCTCGGAGATTTTCCCGGAAATT CTCTAGCTTTCTCTCTCTCTCTCTCACGACAAACCCTCATCGACACAGAGACCCTCTTTCAATTCTCGTGTAATCTTCTT CTCTATCCGCTTTGGCGTTTTCGCGGAGAACAAGAAGTTCTAGGGTTTAAGAGTGATAATGGCTACGGGAACTCTTGGTC AAATCAATGCGATTGAATCTCCTTTGGTGGGATCCAGAAGCGTTGATTGTTTCGAGAAGTTGGAACAAATTGGCGAGGGC ACATATGGGTCAGTGTTCTTTTTCATCATGTTCTTGTTTTGTCCCCTTTTTCTGAATTTTTGTTGTAGTGTGATTCATAG TTTCTCCAAATTTGTAATTTTTTTGGTTTAGTTTTTGTGTTTTAGCTGTGTAGGTGTGATGTCTTGTGATTTAAGGTTAT GGGCAGCAGCTACTTATGTTTGATCATGTTATCATAGTTTTATTAGTTGTTTCTGATGGTGGAATTGACTTGGAAATTTT TTTGTGTATAATGTAGTATGTACATTGTAAGAGAAGATTATGTATTCAATGTGATGCTGGTTCTATAGTTTTGGGGATGG GGGGTTGCTTCATGTGTACTAGGGATGCTGCTTTAGCTTTTATATGCCGGGAAGGTAGCGGCATTGGCAGGAGCTTCATT GATGTTTTAGGGTTTATGATTATAATGTCCTCCCTTTAATTTCAACCAGAAGGGAGGGAGTTCGAGCTTTTGCTTTTTAG CTATGGAGAAGCAGCATAAGAGCATGAGAATGATGAGATAACTAGCTAGTGAATGTGACTTCTCGAAGCGTGATGTGCTT CCTTTGATTGATAGAGTTGATTGAGATTGAAAGAAACCAGCCCTATCTGCCAACATACTGTTTTTGAGAAGGGTAGAATC TTATTAGGAGCATAAGTAAAACTATGTTAATCGAGTTCTTGTCATTTTGTGCCATCTTAAGGTTAAGGGTTATCTCTGGT TTCTAATACTCGTAGTTTTCTACATTTCAAATTGAATCAAATGTGGCATTTTCATGTACTTTTTTCTGAAATGTTTTGTA TGTATACCCTTTATATCGTGTTTGTGCTTTGCTTGTGGAGTTTCTGGCAGCATTCATGCACTGATAAGGGAAGAGAGACC GAGAGAATAGTACTTCTAGCTTTTAAAATGTCTTACCTGTTTGCATTGTAGAAAAACATTTATTTGTGCTAGATTCATAT ATACTGTTCACAATCAATTCAAATACTTATTAAACATGTTTATTCTGTGTTCACCTTTTAAAACTACTTGAATATTCTTT GATAGTATATTTTTGATAAACTACATAAAATGCTCTGGACACAGTTCCCATTCCCAAATATATTTTTTTCTTAAAATGCT AGAAAATTTTAGCCTTCTTACTCGCACTTTTATTTTTTCTTTTTGATATTTGTTCCTCCTGCTTCTATGACATTGGGCAT CCCTGAAATGCTTTAAAAATTTTCCTTGGTATAGGAATTGTTTTGTTCTTTTATGTTCCAGTAATTATTTCTACCTTTGC ACTTTATTTTTACCTTTTTGATATTTGTTCCTCCTGCTTCTACATTGGACATCCCTGAAAGGCTTTAAAATTTTACCTTG GTATAGGAATTGTTTTGTTCTTTTATGTTCCAGTAATTATTTCTACCTCTTTGCTGATATGTTCTAAAGGAAAATAATCT GTGCTTTACCATGCTTATCCTTGCAGTCAAGTTTACATGGCTAAAGAGCATAAGACGGGTGAAATTGTTGCTCTGAAGAA AATACGAATGGACAATGAGAGAGAAGGGGTATAATTGTATCTCGTTGCTCAATGTTGCATTGTTTATTATATTTATGATG CATTATTGCCATTAGTTTGGTGCTTCATTTGTGATATCTTGGGATGTCTCTTGCTTGCTCCCTTTTCAAACATTTGATGG TTTGTACAATTCAGTATACCAAAATCTGAAGTTTCAGTATCGAACTGTTGGTTTTCTGTAATATGGGTTTCTTCTCTGAA TCAAGCTTGAATCATATCATTGCAGTTTCCCATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTCCACCATGAAA ATGTAATCAAGTTGAAAGAAATAGTGACTTCTCCAGGTACATTTTTCGATGATCTCAGATCAGAACATCTTTTCTTTTTA TTTATCAAAATGATGTGAGCTTTAAAAATACTGTTTCATTGTCTTCTAACATTTTGGGTTTCTTTTTACAGGACCCGAGA AAGATGAACAAGGGAGGCCAGGCAAGTCATTCATTTTCATGATATCAGTGGATTACCTATTTTTGAAAATTACACAGTAG CATGTAGTATGCTTTTTGTTATGACTATCTGAATATACCCATCACATTCTGTTTGTTTCTCTTATATCCATAATTTCCTG CTTCATCGTTTTTTTTGGTATTGCGCAGATGGTAATAAATACAAAGGTGGCATTTACATGGTCTTTGAATACATGGACCA TGATTTGACAGGTCTTGCTGACCGACCTGGGATGAGATTTACTGTCCCTCAAATTAAGGTATTATTTTTTAAATATTGTT TTAATTCATATGCTGATAGTTATTGTTATAGACTTATAGTGATATCTTGGTTGATTTCCTTTCTGAAGTGTTACATGAGA CAGCTTTTGACGGGGCTTCATTATTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGTTCTAATTTCTTCCAAAG TGTTACTTGTCCAAGATGTCAGTATGAGATCCTGTCATATGGATTATTACTCCAATTTGATTTATATTGTTCCTCTGCAG GCTCAAATCTTCTTATAGATAATGAAGGCAATTTGAAGCTTGCAGATTTTGGATTGGCTCGATCATTTTCTAATGAGCAC AATGCAAATCTTACAAACCGTGTCATCACGTTATGGTACAGGTAATTGATGTTCCTGTGATAATGACACTAAAATTGGTG TTTAATTTTGGCCTGTCTAAGTTCAATTCTGTGGTGCATTGTTATGAAATGATTCTATATAATATACACCCATTGATTTA TTTCATTCCATATTTAGACCCCCTGAGTTGCTGCTCGGGGCAACAAGGTATGGGCCAGCTGTAGATATGTGGTCTGTTGG GTGCATTTTTGCCGAGCTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGGTTAGTGTTGCTTTATATATAATTG AGTGAGATTAGGGGCAAAGTGTTTGAGTGGTGGTTGTGAAATTATTTATTTTCCAGGTTGGGTTTTATCCAGTATATTGT CTGAACTCAATATAGATGCATTAAGGACTGGAAGAAGAGATTCTTCATATCATGCACATAGCCTTAAAGTATTTATCAAA ATGGCTTTAGAGTTTTGGATCCAACCTAATAATTGTTTATGTTTGGAAATATTGATTTTGTTAGGAGGGTCAAACTATGT AGTATGTACATGTATTAAACCTGGGCTTGATGGCATGATAATGACAATTTTTTGATTTCTAGATCTAACCTCAATAACTT TCGGAAATTCACTTATTTATGCTCTTACATTTATTCCATTTTTGCCTTTCCGATATAAGGCCTACAGTATATCGGTATTG AATTTGTTTAGCACAGCTTGAATGTAATGCTTGTTTTCTTGGTGAATATTGTAGCCAGAACAATTAAATAAGATTTTTGA GCTGTGTGGAGCACCAGATGAGGTGAACTGGCCTGGTGTTTCTAAGACTCCATGGTATAATCAATTTAAGCCATCAAGAC CCATGAAAAGGCGTTTGAGGGAAGTTTTCAGACAGTAAGTATTCTAGTACGAGCATCGTTGATTATCAAGGCTCTTTTAT CCAAAAGAAAAAGTAACTATATGCTATATTCTGTTTTTACCCGTTTAAGCTGAATAGCTTTTCTCCCTGTGACTTGAATT ATAGTTTTGATCGTCATGCTCTGGAATTGTTAGAGAAGATGCTGACACTTGATCCTTCTCAGGTATCATTTCCTCACTTG TGGGTCAGATTTATTAATTGATAGTAAATACTTAGTTGTTATTTTATATGTTTTAATGCTTTCGATTTTTTTTATGTTTT ATATGCCCATTCCAATTTATCTTACATGATTCAGCCTCTTCTAATTTTATAGTCAGTTGTCTGTTTGTTTCTACTATTTT TCTGAAGTAATATCATGCGTCTTGTATTCTTATTGACAAATTGTTTTTTGAGTGTATGACAAAAGTGGTATTCGCCTGGT TTTGTTCTTAGTGGCCTGTGTTATGTGATCAAATTGATGAAAAAAAATATGAGATTGAAAAAGTTATCTATTTATGCATT TATTTTAAAAACATGAAGTACCTTGTTTTTCATTGGAATCCATTGATTATTAATATTATTAATTACCACTGGGTCACAAT CTTTTATGACATGTTCTTGATTATTTGTTTACCATTTTGATTTCTTAATAGAGAATTACTGCCAAGGATGCACTTGATGC TGAGTATTTCTGGGCTGATCCATTACCATGTGATCCCAAGAGGTATGGCCTCCCATCCCATTCCTCTTTTCCTTCCCCTT TAAAGTTTTTGCTTCTGTCTTCTAATTATTTTCTACTCTATTAATTCAACTCACTACTTCTTTTATGTTTGGCTTAGTTT ACCCAAGTATGAGTCATCACATGAGTTCCAAACCAAGAAAAAGCGTCAGCAGCAACGGCAAAATGAAGAAAATGCCAAGC GTCTTAAATTGCAGCATCCACAGCCGCATACTCGACTTCCCCCAATTCAGCAGGCTGGGCAACATGGTCAAATGCGGCAA GGTCCTAACCACCCTATTCATGGCTCTCAACCAGCAGTTGCTGCAGGGTCTAACCATCATTACAGTAAGCCTCGAGGTCC TTCTGGTGGGCCAGGAAGATATCCTGCTGGTGGGAACCCCAGTGGGGGGTACAATCACCCAAATCGTGGAGGGCAAGGCG GCGGCAGTTATGGCAGTGGGCCATATCCTCCTCAAGGACGGGGCGCACCTTATGCATCTAGTGGCATGCCTGGTGGGGGT CCTCGTGGTGGAGGTGGTAGTGGCTATGGAGTTGGAGCTCCAAGTTATCCTCAAGGTGGTCCATATGGCGGTTCTGCAGC TGGTCGTGGCTCAAACATGATGGGTGCAAACCGTAACCAGCAGTATGGTTGGCAGCAGTAAAAGCATTTTCTTATGGTTG GCAGCAGTCTTTGTCATTTTCTTATCGCGATTTGGTGCTGCTTCTGTAAGATGGTACTTGATAAAAGTTATAGAAAGATA AGACATACTGATAGGATTGAGTTACTGGGAAAAAAATATGATCCCTTTCGATTAGATTATTGATATATTTACTAGATTAC TTGAGAACTGAGTTTTGTTTTCTTGATTTTCAAATACTTTGTAATTTGGTGTTTCCAATATGTACCAACTTTCCTGTGTT ACAATTTACAAGTATTTTTTTCTGATAAATAATAAACGGATGGCAATGATTTAAAGTTGATACAAA
CDS sequence (LotjaGi6g1v0188800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACGGGAACTCTTGGTCAAATCAATGCGATTGAATCTCCTTTGGTGGGATCCAGAAGCGTTGATTGTTTCGAGAA GTTGGAACAAATTGGCGAGGGCACATATGGTCAAGTTTACATGGCTAAAGAGCATAAGACGGGTGAAATTGTTGCTCTGA AGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCCATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTCCAC CATGAAAATGTAATCAAGTTGAAAGAAATAGTGACTTCTCCAGGACCCGAGAAAGATGAACAAGGGAGGCCAGATGGTAA TAAATACAAAGGTGGCATTTACATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGACCGACCTGGGATGA GATTTACTGTCCCTCAAATTAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGTCATGTAAATCAAGTACTT CATCGTGATATCAAAGGCTCAAATCTTCTTATAGATAATGAAGGCAATTTGAAGCTTGCAGATTTTGGATTGGCTCGATC ATTTTCTAATGAGCACAATGCAAATCTTACAAACCGTGTCATCACGTTATGGTACAGACCCCCTGAGTTGCTGCTCGGGG CAACAAGGTATGGGCCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCCGAGCTTCTTCATGGGAAGCCTATCTTT CCTGGAAAAGATGAGCCAGAACAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCAGATGAGGTGAACTGGCCTGGTGT TTCTAAGACTCCATGGTATAATCAATTTAAGCCATCAAGACCCATGAAAAGGCGTTTGAGGGAAGTTTTCAGACATTTTG ATCGTCATGCTCTGGAATTGTTAGAGAAGATGCTGACACTTGATCCTTCTCAGAGAATTACTGCCAAGGATGCACTTGAT GCTGAGTATTTCTGGGCTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTATGAGTCATCACATGAGTTCCAAAC CAAGAAAAAGCGTCAGCAGCAACGGCAAAATGAAGAAAATGCCAAGCGTCTTAAATTGCAGCATCCACAGCCGCATACTC GACTTCCCCCAATTCAGCAGGCTGGGCAACATGGTCAAATGCGGCAAGGTCCTAACCACCCTATTCATGGCTCTCAACCA GCAGTTGCTGCAGGGTCTAACCATCATTACAGTAAGCCTCGAGGTCCTTCTGGTGGGCCAGGAAGATATCCTGCTGGTGG GAACCCCAGTGGGGGGTACAATCACCCAAATCGTGGAGGGCAAGGCGGCGGCAGTTATGGCAGTGGGCCATATCCTCCTC AAGGACGGGGCGCACCTTATGCATCTAGTGGCATGCCTGGTGGGGGTCCTCGTGGTGGAGGTGGTAGTGGCTATGGAGTT GGAGCTCCAAGTTATCCTCAAGGTGGTCCATATGGCGGTTCTGCAGCTGGTCGTGGCTCAAACATGATGGGTGCAAACCG TAACCAGCAGTATGGTTGGCAGCAGTAA
Protein sequence (LotjaGi6g1v0188800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATGTLGQINAIESPLVGSRSVDCFEKLEQIGEGTYGQVYMAKEHKTGEIVALKKIRMDNEREGFPITAIREIKILKKLH HENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVL HRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGATRYGPAVDMWSVGCIFAELLHGKPIF PGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPSRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRITAKDALD AEYFWADPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKLQHPQPHTRLPPIQQAGQHGQMRQGPNHPIHGSQP AVAAGSNHHYSKPRGPSGGPGRYPAGGNPSGGYNHPNRGGQGGGSYGSGPYPPQGRGAPYASSGMPGGGPRGGGGSGYGV GAPSYPQGGPYGGSAAGRGSNMMGANRNQQYGWQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 512 | 507 | 5.3E-281 | – | |
| PANTHER | 6 | 512 | 507 | 5.3E-281 | – | |
| Gene3D | 13 | 121 | 109 | 4.3E-40 | – | |
| SUPERFAMILY | 19 | 331 | 313 | 1.14E-99 | ||
| Pfam | 25 | 324 | 300 | 6.3E-75 | ||
| SMART | 25 | 324 | 300 | 1.6E-97 | ||
| ProSiteProfiles | 25 | 324 | 300 | 46.082 | ||
| CDD | 25 | 324 | 300 | 0.0 | – | |
| ProSitePatterns | 31 | 54 | 24 | - | ||
| Gene3D | 122 | 364 | 243 | 8.5E-78 | – | |
| ProSitePatterns | 159 | 171 | 13 | - | ||
| MobiDBLite | 335 | 515 | 181 | - | – | |
| MobiDBLite | 337 | 366 | 30 | - | – | |
| MobiDBLite | 373 | 387 | 15 | - | – | |
| MobiDBLite | 501 | 515 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0188800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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