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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0188800 |
Transcript ID | LotjaGi6g1v0188800.7 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G10270.1 cyclin-dependent kinase C;1; Swiss-Prot: sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1; TrEMBL-Plants: tr|I1JIS7|I1JIS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0188800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48404538..48408002) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTAAAGAGCATAAGACGGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGGTATAATT GTATCTCGTTGCTCAATGTTGCATTGTTTATTATATTTATGATGCATTATTGCCATTAGTTTGGTGCTTCATTTGTGATA TCTTGGGATGTCTCTTGCTTGCTCCCTTTTCAAACATTTGATGGTTTGTACAATTCAGTATACCAAAATCTGAAGTTTCA GTATCGAACTGTTGGTTTTCTGTAATATGGGTTTCTTCTCTGAATCAAGCTTGAATCATATCATTGCAGTTTCCCATAAC TGCTATACGTGAAATCAAAATTCTAAAGAAACTCCACCATGAAAATGTAATCAAGTTGAAAGAAATAGTGACTTCTCCAG GTACATTTTTCGATGATCTCAGATCAGAACATCTTTTCTTTTTATTTATCAAAATGATGTGAGCTTTAAAAATACTGTTT CATTGTCTTCTAACATTTTGGGTTTCTTTTTACAGGACCCGAGAAAGATGAACAAGGGAGGCCAGGCAAGTCATTCATTT TCATGATATCAGTGGATTACCTATTTTTGAAAATTACACAGTAGCATGTAGTATGCTTTTTGTTATGACTATCTGAATAT ACCCATCACATTCTGTTTGTTTCTCTTATATCCATAATTTCCTGCTTCATCGTTTTTTTTGGTATTGCGCAGATGGTAAT AAATACAAAGGTGGCATTTACATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGACCGACCTGGGATGAG ATTTACTGTCCCTCAAATTAAGGTATTATTTTTTAAATATTGTTTTAATTCATATGCTGATAGTTATTGTTATAGACTTA TAGTGATATCTTGGTTGATTTCCTTTCTGAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGTCATGTAAAT CAAGTACTTCATCGTGATATCAAAGGTTCTAATTTCTTCCAAAGTGTTACTTGTCCAAGATGTCAGTATGAGATCCTGTC ATATGGATTATTACTCCAATTTGATTTATATTGTTCCTCTGCAGGCTCAAATCTTCTTATAGATAATGAAGGCAATTTGA AGCTTGCAGATTTTGGATTGGCTCGATCATTTTCTAATGAGCACAATGCAAATCTTACAAACCGTGTCATCACGTTATGG TACAGGTAATTGATGTTCCTGTGATAATGACACTAAAATTGGTGTTTAATTTTGGCCTGTCTAAGTTCAATTCTGTGGTG CATTGTTATGAAATGATTCTATATAATATACACCCATTGATTTATTTCATTCCATATTTAGACCCCCTGAGTTGCTGCTC GGGGCAACAAGGTATGGGCCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCCGAGCTTCTTCATGGGAAGCCTAT CTTTCCTGGAAAAGATGAGGTTAGTGTTGCTTTATATATAATTGAGTGAGATTAGGGGCAAAGTGTTTGAGTGGTGGTTG TGAAATTATTTATTTTCCAGGTTGGGTTTTATCCAGTATATTGTCTGAACTCAATATAGATGCATTAAGGACTGGAAGAA GAGATTCTTCATATCATGCACATAGCCTTAAAGTATTTATCAAAATGGCTTTAGAGTTTTGGATCCAACCTAATAATTGT TTATGTTTGGAAATATTGATTTTGTTAGGAGGGTCAAACTATGTAGTATGTACATGTATTAAACCTGGGCTTGATGGCAT GATAATGACAATTTTTTGATTTCTAGATCTAACCTCAATAACTTTCGGAAATTCACTTATTTATGCTCTTACATTTATTC CATTTTTGCCTTTCCGATATAAGGCCTACAGTATATCGGTATTGAATTTGTTTAGCACAGCTTGAATGTAATGCTTGTTT TCTTGGTGAATATTGTAGCCAGAACAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCAGATGAGGTGAACTGGCCTGG TGTTTCTAAGACTCCATGGTATAATCAATTTAAGCCATCAAGACCCATGAAAAGGCGTTTGAGGGAAGTTTTCAGACAGT AAGTATTCTAGTACGAGCATCGTTGATTATCAAGGCTCTTTTATCCAAAAGAAAAAGTAACTATATGCTATATTCTGTTT TTACCCGTTTAAGCTGAATAGCTTTTCTCCCTGTGACTTGAATTATAGTTTTGATCGTCATGCTCTGGAATTGTTAGAGA AGATGCTGACACTTGATCCTTCTCAGGTATCATTTCCTCACTTGTGGGTCAGATTTATTAATTGATAGTAAATACTTAGT TGTTATTTTATATGTTTTAATGCTTTCGATTTTTTTTATGTTTTATATGCCCATTCCAATTTATCTTACATGATTCAGCC TCTTCTAATTTTATAGTCAGTTGTCTGTTTGTTTCTACTATTTTTCTGAAGTAATATCATGCGTCTTGTATTCTTATTGA CAAATTGTTTTTTGAGTGTATGACAAAAGTGGTATTCGCCTGGTTTTGTTCTTAGTGGCCTGTGTTATGTGATCAAATTG ATGAAAAAAAATATGAGATTGAAAAAGTTATCTATTTATGCATTTATTTTAAAAACATGAAGTACCTTGTTTTTCATTGG AATCCATTGATTATTAATATTATTAATTACCACTGGGTCACAATCTTTTATGACATGTTCTTGATTATTTGTTTACCATT TTGATTTCTTAATAGAGAATTACTGCCAAGGATGCACTTGATGCTGAGTATTTCTGGGCTGATCCATTACCATGTGATCC CAAGAGGTATGGCCTCCCATCCCATTCCTCTTTTCCTTCCCCTTTAAAGTTTTTGCTTCTGTCTTCTAATTATTTTCTAC TCTATTAATTCAACTCACTACTTCTTTTATGTTTGGCTTAGTTTACCCAAGTATGAGTCATCACATGAGTTCCAAACCAA GAAAAAGCGTCAGCAGCAACGGCAAAATGAAGAAAATGCCAAGCGTCTTAAATTGCAGCATCCACAGCCGCATACTCGAC TTCCCCCAATTCAGCAGGCTGGGCAACATGGTCAAATGCGGCAAGGTCCTAACCACCCTATTCATGGCTCTCAACCAGCA GTTGCTGCAGGGTCTAACCATCATTACAGTAAGCCTCGAGGTCCTTCTGGTGGGCCAGGAAGATATCCTGCTGGTGGGAA CCCCAGTGGGGGGTACAATCACCCAAATCGTGGAGGGCAAGGCGGCGGCAGTTATGGCAGTGGGCCATATCCTCCTCAAG GACGGGGCGCACCTTATGCATCTAGTGGCATGCCTGGTGGGGGTCCTCGTGGTGGAGGTGGTAGTGGCTATGGAGTTGGA GCTCCAAGTTATCCTCAAGGTGGTCCATATGGCGGTTCTGCAGCTGGTCGTGGCTCAAACATGATGGGTGCAAACCGTAA CCAGCAGTATGGTTGGCAGCAGTAA
CDS sequence (LotjaGi6g1v0188800.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAAAGAGCATAAGACGGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCCAT AACTGCTATACGTGAAATCAAAATTCTAAAGAAACTCCACCATGAAAATGTAATCAAGTTGAAAGAAATAGTGACTTCTC CAGGACCCGAGAAAGATGAACAAGGGAGGCCAGATGGTAATAAATACAAAGGTGGCATTTACATGGTCTTTGAATACATG GACCATGATTTGACAGGTCTTGCTGACCGACCTGGGATGAGATTTACTGTCCCTCAAATTAAGTGTTACATGAGACAGCT TTTGACGGGGCTTCATTATTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGCTCAAATCTTCTTATAGATAATG AAGGCAATTTGAAGCTTGCAGATTTTGGATTGGCTCGATCATTTTCTAATGAGCACAATGCAAATCTTACAAACCGTGTC ATCACGTTATGGTACAGACCCCCTGAGTTGCTGCTCGGGGCAACAAGGTATGGGCCAGCTGTAGATATGTGGTCTGTTGG GTGCATTTTTGCCGAGCTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAGATTTTTG AGCTGTGTGGAGCACCAGATGAGGTGAACTGGCCTGGTGTTTCTAAGACTCCATGGTATAATCAATTTAAGCCATCAAGA CCCATGAAAAGGCGTTTGAGGGAAGTTTTCAGACATTTTGATCGTCATGCTCTGGAATTGTTAGAGAAGATGCTGACACT TGATCCTTCTCAGAGAATTACTGCCAAGGATGCACTTGATGCTGAGTATTTCTGGGCTGATCCATTACCATGTGATCCCA AGAGTTTACCCAAGTATGAGTCATCACATGAGTTCCAAACCAAGAAAAAGCGTCAGCAGCAACGGCAAAATGAAGAAAAT GCCAAGCGTCTTAAATTGCAGCATCCACAGCCGCATACTCGACTTCCCCCAATTCAGCAGGCTGGGCAACATGGTCAAAT GCGGCAAGGTCCTAACCACCCTATTCATGGCTCTCAACCAGCAGTTGCTGCAGGGTCTAACCATCATTACAGTAAGCCTC GAGGTCCTTCTGGTGGGCCAGGAAGATATCCTGCTGGTGGGAACCCCAGTGGGGGGTACAATCACCCAAATCGTGGAGGG CAAGGCGGCGGCAGTTATGGCAGTGGGCCATATCCTCCTCAAGGACGGGGCGCACCTTATGCATCTAGTGGCATGCCTGG TGGGGGTCCTCGTGGTGGAGGTGGTAGTGGCTATGGAGTTGGAGCTCCAAGTTATCCTCAAGGTGGTCCATATGGCGGTT CTGCAGCTGGTCGTGGCTCAAACATGATGGGTGCAAACCGTAACCAGCAGTATGGTTGGCAGCAGTAA
Protein sequence (LotjaGi6g1v0188800.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEHKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYM DHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRV ITLWYRPPELLLGATRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPSR PMKRRLREVFRHFDRHALELLEKMLTLDPSQRITAKDALDAEYFWADPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEN AKRLKLQHPQPHTRLPPIQQAGQHGQMRQGPNHPIHGSQPAVAAGSNHHYSKPRGPSGGPGRYPAGGNPSGGYNHPNRGG QGGGSYGSGPYPPQGRGAPYASSGMPGGGPRGGGGSGYGVGAPSYPQGGPYGGSAAGRGSNMMGANRNQQYGWQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
CDD | 1 | 284 | 284 | 0.0 | – | |
PANTHER | 1 | 472 | 472 | 2.9E-259 | – | |
Gene3D | 1 | 81 | 81 | 2.3E-26 | – | |
SMART | 1 | 284 | 284 | 9.6E-78 | ||
PANTHER | 1 | 472 | 472 | 2.9E-259 | – | |
ProSiteProfiles | 1 | 284 | 284 | 40.852 | ||
SUPERFAMILY | 2 | 291 | 290 | 1.05E-89 | ||
Pfam | 2 | 284 | 283 | 8.3E-67 | ||
Gene3D | 82 | 324 | 243 | 7.0E-78 | – | |
ProSitePatterns | 119 | 131 | 13 | - | ||
MobiDBLite | 295 | 475 | 181 | - | – | |
MobiDBLite | 297 | 326 | 30 | - | – | |
MobiDBLite | 333 | 347 | 15 | - | – | |
MobiDBLite | 461 | 475 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0188800.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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