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LotjaGi6g1v0193100.1

Overview

Field Value
Gene ID LotjaGi6g1v0193100
Transcript ID LotjaGi6g1v0193100.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:48921596..48927302) extracted from Lotus japonicus Gifu genome v1.2.

TAATAGAACGTGGGACCAGTGTCACCTTCTCTCTCTCCGTGTCTTTCTCTCTCCTTTCTGTATTTATCATCTCCCTCTTC CTCTTCCATTAACTCAACTCCATTCCACTCAAGTTTCGATTTTTATGTGCCTTCTTGTCTCCAATTCCTCTTCTGAGGTA GAAAGCTTCTTCCTTTTTTGAGCATTTCAGTTTATTTTTCTCTGTTTCTTTAGCTTTTGATTTGCATTCATGGTTTGTTT TCTCGTTTGATTCATGCCATTGTCATGTTAACACTGCTCACACTGATTCATGGCATTCTTGTTCAAATCTCTATGTCTTT TGTTTGTGTTTGTGTTTGTGTGTGTGTGTTTCCATTACTTGCTTTAAATGCTACATTGTGATTGTACTACTGTTTGATCC ACAAGCTGAAATGGGGTTTTGAAATTTCTGCAGATTGCTTGTGGATTTGTGTGCTGAGCCCTTGAAATGGGGAGATCTTT GATTCACATTGCGGGTGGTGTTCTGCTGCTACTGTGCTTGCTGGTTTCATTTTCTGAAGCAGCTGAATACTTGAAGTACA AAGACCCTAAGGTTGCTCTGAATAGAAGAATCAAAGATTTGATGAAAAGGATGACTCTAGAGGAAAAGATTGGTCAAATG ACACAGGTTGAAAGGAGTGTTGCTACTCCTGATGCCATGAAGAAGTACTTCATTGGTAAGTAAATCACTCATCAAATCTA GTGCTTTGTGTTTCTTTTTTTGTAATTTTTTGATGTGATGGGTTGAGATGATTGATATGCAACTTATTGTTTTTTTTTTT TTTTTGAAAATGCATATGCAACTTATTGTTGATGTGCAGGGAGTGTGCTGAGTGGGGGAGGGAGTGTTCCAGCTCCAAAG GCATCTGCTGAGACCTGGGTGAAAATGGTGAATCAGATGCAAAGTGCATCTTTATCCACTCGCCTTGGGATTCCGATGAT TTATGGGATTGATGCAGTTCATGGCCATAATAATGTCTACAATGCTACTGTTTTTCCTCACAATGTTGGGCTGGGAGTTA CCAGGCAAGTTTATGTAAATGCAGAAATTTGAGTAGTCATGAAATGATTAATATTATAGAAAATAAAATGTGAGAATTCA TGAAGTCATAGTTGATAATTTGTAATTGGAATGATCTGGTTTTTCCAAATCATAATGAAGTGAATACTGTTGAAGCTATA TTTGAACATCTTTGGTAAACCCCAAACTCAATCATTCAATGCATTTCCATAGTGATTTTGGAATCTTAAAATGGATGTTG TGTTATGTTATATATCTTTTTTTTGGATTTTAATGTAATGGAATCTACTGTTCATTAGGGATCCAGTGCTTATAAAAAAG ATTGGAGAAGCTACTGCTCTTGAAGTTAGGGCTACTGGAATTCCATATGTCTTTGCTCCATGTATTGCGGTAATTAAGTA GCATTTAATGTGTTCTGTTGTTCAGAGCATATATGACATTGTTCAAGTCTTGTAAATCTGATATGTTGATGGACTTTACA TCTACAGGTCTGCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAGGACCCTAAGATTGTTCGAATTATGA CTGAAATTATACCTGGTTTGCAAGGAGATCTCCCTGGAAATTCCAAGAAGGGGGTTCCCTTTGTTGCTGGAAAGTAAGAT TTTTGGTTGTAGCTCAATATTGCAGATAAATTTTGTTAGTCTTGTAAGGTTAATGCTCTTCCTTGAAGGGCTAGTTTAAC TGTTAGAAAATACATTTTTTTCAAAACAGAAAATATATCTCAAATCCTTTTAAACTTTCATATTTTAAGTTTCTTGGTGG AAACAACATATTGTCCTTATACGTTTTCTTAAAAGCCTTTCATCTTGTTCTTCTTTATTATTTTGCCTGTTTCCAGTTAA AAGTTTCCCTGCATTCCTACAAGCAAATATTACATTATCAATACTTGAAATTTCTGTATGAGTATTATGACAGTGATCAG TTTCATTCTGGACATTACATTGATATCTTGGTTTGATGGGGTAGTTCTTACTGTGGACATAGATTCTCCTATCAATCAAA GCATCGATTAATTACAGAACATAAATTGCATTCTAAAAAATAGGTTAAAAAAATTAAGGTAAAGAAAAATGTAGAAAAGG TTGTGAACCCATAAGCTACTTTTGGATGGTCATTAACCATTTGAAGGGTCCTAGACATTTGGGTTGTCGTAACCGTATAG ACTATAGATAGTAGGATTCACAAGTTTTTGCATTCAAATGGCTGGGACCATCCAAATGTCAAGTTATATGCTAATAATGC TATAAAGATATGATTTCCATGTATCCAAAAAATCTTATGATTTATTACGATTTGGCCATAAAGCATGAATGTCACCTGCA TATCATACATAATACATAAAATGATGTAACAGCTTGCTCTCTCAATTCTGATAAAGGTTGTATATGTAGATATTTTTGTT GTAATCGATCACTTTGTCTAAGAGTTCAGATATCATTTGCTTAGACTTCTGCTTCTCTGATGTCGTTTTTTTTTATGACA AAGTTTCATATCGGATGTCATCTCAAATTTGTTAATCTATCTGCAGACACAATCTTGGCATTCCTTACACTTGGTATTGC AATACAGACCTAAGATAAAAATGTCTCTTATTTTAATTTCTTTGACCCAGGAACAAGGTTGCAGCTTGTGCCAAGCATTA TGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATCAGTTACAATGGGTTGCTTGGAATTCACA TGCCAGCATACTTTGACTCTATTATCAAGGGTGTTTCAACAGTAATGGTTTCCTACACTAGCTGGAATGGGAAGAAGATG CATGCTAATAAAGATCTTGTCACCGGTTACCTCAAGAACAAACTGCGGTTCAGGGTAATAAAATTTGTCTATTTAGTCTT CTAGTGTAAAAATTATCTGACTACATCAGGAAAACAAAAACAGATGTAAAGAGCTTCATATTTTTTCTCCCATCTGTCAG GGTTTTGTCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCGTATTCTGTTCAAGC TGGTGTTAGTGCTGGAATTGATATGGTAAATATTATTTTCATTTATTAGGAGTTAAAGAAGAAATATAATTTTTTGATAG ACTAGAGTTTAATATTATGCATTAACTTTTTATTTGGCATTTGCATTATTGACAGATTATGGTTCCCTATAACTTCACTG AGTTCATTGATGAGCTAACCTATCAAGTAAAGAACAATATTATCCCCATGAGCAGGATTGATGATGCTGTGGCAAGAATC TTAAGAGTAAAATTTACCATGGGTCTATTTGAAAGTCCACTTGCTGATCTAAGCCTGGTGAACCAACTGGGTAGCAAGGT ACATTTTCTTAAGGACGTCATTTGAACATATGCTTGATACTTTATGCTATTCTTTCAAATGAATTTTTTTTTCCTTAATT AGTTATATATTGTCTTAAACAGGAACATAGAGAGTTAGCAAGGGAAGCTGTACGGAAATCCCTAGTGTTGCTAAAGAATG GTAAATCTTCTCAGAAGCCATTGCTTCCCCTTCCCAAGAAAGCGGCAAAAATATTGGTGGCCGGAAGTCATGCTGACAAT TTGGGTTATCAATGTGGAGGATGGACAATTACCTGGCAGGGGCTTGGTGGCAATGATCTTACAACAGGTAAGTCAATACC CTTTCTAAGTAACTTGTCTAACTATTCCTAACATTCTCTAACCTCTTTAGACTTCTTCTCTATCTGTTCCCTTTCTTTTA ATTATGTAGTAATTAGTAATTACTCTAAAATCTTATAATAATATCCTTGGTTACAATCATTGTTGCGTAGTAATTACATT TTAAATCTTAGTTTGTCTTAGTCAAGCTAGGGCTTACACAAGAAACTTTCACTCATATTGTGTCACCACTTGAGAGATAT TTGGTCGTAGTTTCCTCTAGTGATATTCCAGACTATCTGATAGTACTCCATTTTGCTAACAGGTACAACAATCCTTGATG CTGTAAAACAAACAGTTGATCCTGCTGCTGAAGTTGTCTACAATGAAAACCCCGATGCCAACTTTGTTAAGTCGAACAAA TTTTCCTATGCCATAGTTATTGTGGGAGAGAACCCTTATGCTGAAACATTTGGTGACAGTTTGAATCTAACTCTACCTGA GCCAGGTCCAAGCACCATCAGCAACGTATGTGGGTCTATTCAGTGTGTAGTTGTTCTCATCACTGGCCGCCCCGTTGTGA TTCAACCATATCTACCCAAAATTGATGCACTTGTAGCTGCATGGCTTCCTGGAACTGAAGGTCAAGGTGTTGCTGACCTT CTTTTTGGTGACTATAAATTTACTGGCAAGCTGGCAAGAACATGGTTCAAGAGAGTTGATCAGCTCCCAATGAATGTTGG TGACAAACATTATGATCCTCTGTTTCCATTTGGATTCGGGTTGACTACAAACCTCAAAAAATATTGAAACCCCATTTAAC ATGTCTAAGATCACTGCCCTTTTTCTCTAGTAGCCTTGAAACTGTCAATTGGTGAGTGATTATTTCATGTTTATCTTTTT TCTGATAAGCATCTCGGAGAAACTTGAATTATGAGATTCAGAAAGAAAAATGTATTGTGACCAGTGCCTTGGCAATTACA TAAGTATGTAGTTTTCTTAGGTTTATGGATCTTTTAATAAAAATGATTCTTACCAGTGACAGAACTTCTTTAGAATATGG AGGTTGAGTTCAGTTTCTAGTTAGTATCAATAAATACCCAAATGGGAAGGTGAGTTTTTCTTCGTTTTTAGTTTTCTCCC CTTAGTAAAATGAACTTCAGAAAATATAAACCATTTCTCAATGATAAGTATCTTTGCCTTTTAGTCTTTTACAAATAAGT AATTTGAACTTTAATCTCTTAAAATCTTCAATAAAAGTTAAATACTTCCAAAAGAGTACTATCTAATTTGTCAATTTCTT TAGTTTGAGAGTACAACCCAGTTGCAAACACAAAAAAGTAAAAATAAAACATGCTCAAGGGAAATCATAAAATTGAGTAA TTAAACCACTAATTTTGTCGTCGATTTGACATTTATTTTCAACTTAATCTTTATACAAAATTTTGATAAAAAAATAAATT TTTGAACACCATCACATACATTAGCCTCTAAATTATCTCCACATCTCACGATTGTCTCTGAACTATCTCGGTTAGAAGAC AAATATTTTAAGAAAATGTGAGGACAAAATTGGTGGTTTAGCAAAATGGAAAGTTCAATCAATGTGAACTTAAACAAGCT GATAAATTACAACGAGAGTTCCAAATCAACATCAAACATCAAATACATTGTCAACCCAGAAAGGTGTGATATCAAGATAT ACATATGTTGACCATCGAAACTTATGGTTATGGGCTACAAGGCTCTGATGATAGTCTTGCATTCTGGCAACCACTGCGAA ACCTGAATCTCTTTAGGTTGCAACTTTCAGCATCATAATAATCCAAGTCTCTTTTCAGTTTATCTATAGCCTCAACCAAT TCATTTTTTCTTGTTCCCCAAACTCAGAAATTATATGTTCAAATTGCATTTCACGCCCAGAGACTTCTGACACTTCAAAT GTCTGATTTAAATCGATGTCAAAGCGT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0193100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGAAATTATACCTGGTTTGCAAGGAGATCTCCCTGGAAATTCCAAGAAGGGGGTTCCCTTTGTTGCTGGAAAGAA CAAGGTTGCAGCTTGTGCCAAGCATTATGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATCA GTTACAATGGGTTGCTTGGAATTCACATGCCAGCATACTTTGACTCTATTATCAAGGGTGTTTCAACAGTAATGGTTTCC TACACTAGCTGGAATGGGAAGAAGATGCATGCTAATAAAGATCTTGTCACCGGTTACCTCAAGAACAAACTGCGGTTCAG GGGTTTTGTCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCGTATTCTGTTCAAG CTGGTGTTAGTGCTGGAATTGATATGATTATGGTTCCCTATAACTTCACTGAGTTCATTGATGAGCTAACCTATCAAGTA AAGAACAATATTATCCCCATGAGCAGGATTGATGATGCTGTGGCAAGAATCTTAAGAGTAAAATTTACCATGGGTCTATT TGAAAGTCCACTTGCTGATCTAAGCCTGGTGAACCAACTGGGTAGCAAGGAACATAGAGAGTTAGCAAGGGAAGCTGTAC GGAAATCCCTAGTGTTGCTAAAGAATGGTAAATCTTCTCAGAAGCCATTGCTTCCCCTTCCCAAGAAAGCGGCAAAAATA TTGGTGGCCGGAAGTCATGCTGACAATTTGGGTTATCAATGTGGAGGATGGACAATTACCTGGCAGGGGCTTGGTGGCAA TGATCTTACAACAGGTACAACAATCCTTGATGCTGTAAAACAAACAGTTGATCCTGCTGCTGAAGTTGTCTACAATGAAA ACCCCGATGCCAACTTTGTTAAGTCGAACAAATTTTCCTATGCCATAGTTATTGTGGGAGAGAACCCTTATGCTGAAACA TTTGGTGACAGTTTGAATCTAACTCTACCTGAGCCAGGTCCAAGCACCATCAGCAACGTATGTGGGTCTATTCAGTGTGT AGTTGTTCTCATCACTGGCCGCCCCGTTGTGATTCAACCATATCTACCCAAAATTGATGCACTTGTAGCTGCATGGCTTC CTGGAACTGAAGGTCAAGGTGTTGCTGACCTTCTTTTTGGTGACTATAAATTTACTGGCAAGCTGGCAAGAACATGGTTC AAGAGAGTTGATCAGCTCCCAATGAATGTTGGTGACAAACATTATGATCCTCTGTTTCCATTTGGATTCGGGTTGACTAC AAACCTCAAAAAATATTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0193100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTEIIPGLQGDLPGNSKKGVPFVAGKNKVAACAKHYVGDGGTTKGINENNTVISYNGLLGIHMPAYFDSIIKGVSTVMVS YTSWNGKKMHANKDLVTGYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVQAGVSAGIDMIMVPYNFTEFIDELTYQV KNNIIPMSRIDDAVARILRVKFTMGLFESPLADLSLVNQLGSKEHRELAREAVRKSLVLLKNGKSSQKPLLPLPKKAAKI LVAGSHADNLGYQCGGWTITWQGLGGNDLTTGTTILDAVKQTVDPAAEVVYNENPDANFVKSNKFSYAIVIVGENPYAET FGDSLNLTLPEPGPSTISNVCGSIQCVVVLITGRPVVIQPYLPKIDALVAAWLPGTEGQGVADLLFGDYKFTGKLARTWF KRVDQLPMNVGDKHYDPLFPFGFGLTTNLKKY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30620:SF91
1 430 430 5.7E-265 –
Gene3D
G3DSA:3.20.20.300
1 201 201 2.1E-71
IPR036962
PANTHER
PTHR30620
1 430 430 5.7E-265 –
SUPERFAMILY
SSF51445
3 216 214 1.47E-61
IPR017853
Pfam
PF00933
7 180 174 3.8E-31
IPR001764
PRINTS
PR00133
29 45 17 4.2E-6
IPR001764
PRINTS
PR00133
99 117 19 4.2E-6
IPR001764
Gene3D
G3DSA:3.40.50.1700
202 430 229 1.9E-91
IPR036881
SUPERFAMILY
SSF52279
217 426 210 3.27E-59
IPR036881
Pfam
PF01915
217 426 210 7.1E-36
IPR002772

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0193100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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