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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0196900 |
| Transcript ID | LotjaGi6g1v0196900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hsp70 nucleotide exchange factor FES1; TAIR: AT3G51980.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q1E3S4|FES1_COCIM Hsp70 nucleotide exchange factor FES1; TrEMBL-Plants: tr|V7BJD9|V7BJD9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0196900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49389121..49392399) extracted from Lotus japonicus Gifu genome v1.2.
AACGGTTGCTATTCATCTTCATGACGTGTCCTCTGCAAGCTATTTAAAACAAGTGATTCATGAAGTGCCTCTGCAACCTG CTCGTAGCTTCTCCGTTTTCAATATGCACCGAGCACTCTTCCTCTCTCTGCTGCTCTTCACGGCGGCCGCCACCGCCGAC TCCGACACCAACTTCACCTCCGGCCGGCCGTCATGGTCCACAGCCGCCGAGGAACCCGATCTGGCCTCGCCGGATGATTC CGGCCCCGACGGCGGGTTTTCTTCCCTGGACAGCATGTTGCAGTGGGCTATAGGTATGGATAGTCATCAAAATTGCATTT CTAAGAACCCCTTTTGGTTAATTTGTGTTAGAGTCCCACATTGGCTAGAGATATGACCAAACAAGTGCTTATAAATGGTA GAACAACTCTCGACTCTTGAGCTAGCTTTTGTGGTCGAGTATTTGTACGCTGTTGATTTTGTTGCCATTTACTTTAGGTA ATTCTGATCCTGAGAAGTTGAAGGAATCAGCACAAGCACAGCAACGGCTATCACCTAATGACATTCAAAAACGCCAAATG GAAATCAAGGTGTGAAACTAGCTTAGGAAGTTGTTTTTTTGTGTGTGAATTGGGTGTGCTATGTTTGTTACTACTTTCTT ATGTGATGAGTTGTTGTTGGTGGTGCTTAAACAGGAATTGATGGAGAAAATGAGGATGCCGTCGGATGCTGAGTTGATGA AAGTTGCTATAAGTGACTTGAATAATGTGTCTACTTCTTTGGAAGATAGGCACCGTGCTTTGCAGGAGCTTCTTGAGCTT GTTGAGTCAATAGATAATGCAAATGGTTAGGGTATTTGATTAATTTTTTTTTCCTATTGGGTGCTTCTGTGATTTTGGTA GTCTTTGTTTCCAATTGGGTGCTTCAATTTACTGTCATATCCCAAATATAGTTTTTATAAATATATGACATTTTGATTGA ATTGGCTGCTAATATTGAAATGCTACAAGAGTTTTTTTTTTAAATATTATTTACTTCACTTGAACATTCATTCATAGGTA TTTCATCATAGATACTTTGAATTTTATACGTCTCGATCGAGATCTGCTTTTTATATTATGCGCCTTAAATACTTGCTATT TAGAATCTTGTCAATATGAATTCCTCTTTGATATTTGTTTGCTGAACTTTGGAAACATATTGAAAATAAAATCAGATCAT GAAATACTTTTAGACGAAAGGTGCATTTCTGATAGAGATTCTAATGTCTTTCAGATTTGAACAAACTTGGGGGGCTTTCT GTGGTTACTCAAGAACTTAATCACTCTGATCCTAGTATTAGGGCAGTTGCAGCATGGGTTCTTGGAAAAGCTAGCCAAAA TAATCCAATTGTACAGCAGCAGGTATGGTGTTTCATTGATGATTGGTGGAAATTTAGGATGTTGTTAGAAACTGAATCAA AGGAATCCTAGTTGAAGTAAATCTAATGTAGTACTCCCTGGAGAATATCGGTACCATTATGCTATCAATACCAGTGTGGC AGATGAATCAGAAAGATTGAAGCTGTAAAAACAGAACATGTGGTATTTGAGAGACCCTAATCTCTCTCAGTCTCTACCTC CATCCCCTACTTATTTTCTCGTCTCTGTCTCCTCTCCATCTGCTTTCCTGTAGCCATACAGGTCAATTATTCCCCCTCTC CCCTATTCCCATTGATTTCCTTTCTGGAAATATGTTACGCAAATCATCCAATTCCCCCTGATTGCCTCTCATGCAAATGT AATCCACTCCATTAATCATTCATTTCTAATTGATTACGCCTATGTGCTCCTTCCTAATATAAATCTTTGTAATAGGTGGT TTTCTAAAATAAGTTCTTAAGCATTGATGGGGACTAAACTATATAGTAATAGTAATACTACCAAATTTCAACTGTGGCAG GTGTTGGAACTCGGAGTACTCTCGAGGTTGATAATTATGGTAAAATCTGATTCCACAGAAGAAGCGAATAAAGCATTATA TACTGTTTCAGCTTTGATTCGGAATAACTTAGCTAGTCAGGCATTGTTCTATGCTGAGGCTGGAGGTTCAATGCTTCAGG TGACCTATCTATTACTAACATTGTTGTTGATGTTATTATTATTTTGGATTGCATTGTAGCATTGGTTATTGACACTGGTA AGTTTCTAGGATATTTTGAGGAATGCTAGTGTTGATATCAGACTACGGAGGAAGGCTGTGCTTCTATTGGCTGATCTAGC AGAGTATCAATTAGAACATGTTGATAAAGAGGAACCATCATTTTTTAGTGACCAGGATCTTTTGAAGTCTGTGGTTGATT TAACTAAATCAACCGAGCTTGATCTTCAGGAAAAGGTGATTGTTGACATGGCACCTTATATTATTGTTGAAAGCTTTGTC AGGAAATCTGTTGTTTGACTTATGATCTTATCTGTGCAAATGCCTGTCATTGGCCCAACTGACTCTGACCTACAAAAAGC TAGGATTTTAAATTGCACCTCTTCCAAAAGAATATTGCATTAACATGGTTCTTATATAAATTATACTTTTATTTCTGTGT TTGAATTTACATGTTGCATTAGTAGGAGATGCTAAACTTAGATTTATACTATTAACAAAGGGTATGATCAGTAGAGAATT ATGGAAGTGAGATTGGTTTGGACTTGTCATTCACAGTTATTCATTTCTCCCTCCAATTTTTTAGACATGTATACTGATTA TTTTTGTGCATACCTACTATGAATCTTATCTGCACAAATTGGCCCCTTTGGTGGTTCATTTTTAGCTTCTGATATGACTT TTGGGTTGTGCTAAGCAGGCTCTTGTCGCGATTAAGAATCTCTTGCAGCTAAGGACCACTGAAGCTCGGGTTTTCAAGGA CTTCTGTGCTTTAGGTGATGCACTGAGTAGAATGAGACAGTTGTTGCATGATTTAATGGCGGATGAGTATCAGAAAGACT ACGCAACGGATGTGGAAAGTCTTCGGATTGAAGTGGAACACATTTTTCATAGAAAGCTTGTAAAACAGTGATATGTGACA TGCTTAGGCTATGGTGATGACCTTGTATCATTATCTAGTTTTTAGAAAACATGTTTCACACAATTTTGATGCTGACATGG ATATTTGATGAAAGAATATTAGAGGTGCTAATTGTATAGCTATACAGGTTAAAATCTACCAATCCTTTACTAGCATTTGG AGATTTCTGATTTAAATGGTTCTATTGTTAGGTTTTATTCTAATATAAAGTCGAAATCAACAGGCATATTTATCAAGTA
CDS sequence (LotjaGi6g1v0196900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACCGAGCACTCTTCCTCTCTCTGCTGCTCTTCACGGCGGCCGCCACCGCCGACTCCGACACCAACTTCACCTCCGG CCGGCCGTCATGGTCCACAGCCGCCGAGGAACCCGATCTGGCCTCGCCGGATGATTCCGGCCCCGACGGCGGGTTTTCTT CCCTGGACAGCATGTTGCAGTGGGCTATAGGTAATTCTGATCCTGAGAAGTTGAAGGAATCAGCACAAGCACAGCAACGG CTATCACCTAATGACATTCAAAAACGCCAAATGGAAATCAAGGAATTGATGGAGAAAATGAGGATGCCGTCGGATGCTGA GTTGATGAAAGTTGCTATAAGTGACTTGAATAATGTGTCTACTTCTTTGGAAGATAGGCACCGTGCTTTGCAGGAGCTTC TTGAGCTTGTTGAGTCAATAGATAATGCAAATGATTTGAACAAACTTGGGGGGCTTTCTGTGGTTACTCAAGAACTTAAT CACTCTGATCCTAGTATTAGGGCAGTTGCAGCATGGGTTCTTGGAAAAGCTAGCCAAAATAATCCAATTGTACAGCAGCA GGTGTTGGAACTCGGAGTACTCTCGAGGTTGATAATTATGGTAAAATCTGATTCCACAGAAGAAGCGAATAAAGCATTAT ATACTGTTTCAGCTTTGATTCGGAATAACTTAGCTAGTCAGGCATTGTTCTATGCTGAGGCTGGAGGTTCAATGCTTCAG GATATTTTGAGGAATGCTAGTGTTGATATCAGACTACGGAGGAAGGCTGTGCTTCTATTGGCTGATCTAGCAGAGTATCA ATTAGAACATGTTGATAAAGAGGAACCATCATTTTTTAGTGACCAGGATCTTTTGAAGTCTGTGGTTGATTTAACTAAAT CAACCGAGCTTGATCTTCAGGAAAAGGCTCTTGTCGCGATTAAGAATCTCTTGCAGCTAAGGACCACTGAAGCTCGGGTT TTCAAGGACTTCTGTGCTTTAGGTGATGCACTGAGTAGAATGAGACAGTTGTTGCATGATTTAATGGCGGATGAGTATCA GAAAGACTACGCAACGGATGTGGAAAGTCTTCGGATTGAAGTGGAACACATTTTTCATAGAAAGCTTGTAAAACAGTGA
Protein sequence (LotjaGi6g1v0196900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRALFLSLLLFTAAATADSDTNFTSGRPSWSTAAEEPDLASPDDSGPDGGFSSLDSMLQWAIGNSDPEKLKESAQAQQR LSPNDIQKRQMEIKELMEKMRMPSDAELMKVAISDLNNVSTSLEDRHRALQELLELVESIDNANDLNKLGGLSVVTQELN HSDPSIRAVAAWVLGKASQNNPIVQQQVLELGVLSRLIIMVKSDSTEEANKALYTVSALIRNNLASQALFYAEAGGSMLQ DILRNASVDIRLRRKAVLLLADLAEYQLEHVDKEEPSFFSDQDLLKSVVDLTKSTELDLQEKALVAIKNLLQLRTTEARV FKDFCALGDALSRMRQLLHDLMADEYQKDYATDVESLRIEVEHIFHRKLVKQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 7 | 371 | 365 | 1.0E-152 | – | |
| PANTHER | 7 | 371 | 365 | 1.0E-152 | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 372 | 352 | - | – | |
| MobiDBLite | 21 | 53 | 33 | - | – | |
| Pfam | 55 | 146 | 92 | 1.9E-17 | ||
| Gene3D | 88 | 369 | 282 | 6.0E-51 | ||
| SUPERFAMILY | 101 | 325 | 225 | 1.58E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0196900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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