Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0205000 |
| Transcript ID | LotjaGi6g1v0205000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin-like metallo-phosphoesterase superfamily protein; TAIR: AT4G30993.2 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|Q9SCX8|PPA17_ARATH Purple acid phosphatase 17; TrEMBL-Plants: tr|A0A072V8E7|A0A072V8E7_MEDTR Calcineurin-like metallo-phosphoesterase superfamily protein; Found in the gene: LotjaGi6g1v0205000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50212765..50216326) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGTCCGTGTCTTATGGTGTGAATAAAACTATATTGGTAAAACTATTCCATTCGATAATCTCGTTCCGCTTCACTCAA TCATTTATCATTGCTCTTCCAATGAACATAACACAGACACAAGAATAAGTCTTATATGGTAATCACTAATCAGGTAAAAG ACTGTGTCAAGATATTCCAACAAAGCGACAAGGCAGTACTGGATAACATGGATGGAATCAAATTTAATGTCAGCAATCAC ATGTCCAACGTGGGCAAATATAGATCATACAATTCTAGTGTCATCATAATTCAGATCTAACATCAATCAGCGAATAGGTT GTTGGTTCTTACATCGTATGTTGTTTGGATTACAAGGTGATCCAAATGGAGAAAACATCTTGGGCATGCACTGTTATCAT CCAAGTGTGTCTCTGCTTTGCTTTCTACATAGCTCTCAACTTGGGTCAACCTCAGAAATTGGTCAAAACAAATGCAAGTG GCCATGAACCTTTTGATCTCTACTTCATCAGTGTCAGAGGGGGTTTCAGACCCCATTTCCAGCAATTCCATCTTCTCAAG CAGGTAGATTATTAGCTCTCTCTTCACTAAGCTAGCATTTTAACAGTTTGTTGGATGTTTTTCATGATTTTCTTCTTAAT GGGTGTTTGTCAATGGTGGATTTTCATGTTCAACCCAATTTTGTTTATGCTTTGGAAATTTGAAGTTGCATTGTTCCAAC ATTTTCTTGCTTCCCTTTTATTTGTTTGGAAGGAATGGCCCAAGACAGGATGAATGAAGCATATATTTGGATCTTTTTCT GTTTTTCTTTTCCTTAATTAACATGCTTTAGTTTCTTCAGTGTACTTGGTTGGTTGCTTTAACTTTTTTTCATTCTGCTC ACCTTTCTGACCTCTCTCTTACTTCCTGGTGTTCATGAAGATGGAGAAGGTGGCCAGAATTTACAAGGCAAGTTTTGTTG TGAGCAGCAGTGAGCTTGGGGAAGATGATCCTCTCATGCAGAATGTATGTTCTTTTGTTTATATAATTTTTTTCTGTGAC CTTTCTAGCTTTTTGCTGTTTGTAGAAATAGATTTCTTATGTAGTGGCATGCAATTTGAGAGGTTTCTTCAGATTTCAAA TTGCAAATGCTGTCGCGGTTGTGTGATAAGGTCCATAATTTGAAACTATGGTTATGGTTGCTTTTGGTTTTATTGCAATG GCAAATTGTTTCATTGTTTTCAATTAAGAGTCATGGTATATTTCTTTTACAGGCTACTCAACATTTTCCATCATTGAGAA TTCCCTGGTATACAATCCTCTGAGCAATCTGTTATCTGTATTGGTACATATGACACAGAAATTTGTGGCTGCAGAGTCTT GAATTCCAATGTATTGTTTGAGAAAATCACCATCCTTTGTCAATTCTGCTAAATGGGATAGTTATGAAGAGAGTTAGTGT GCAGGTACAACACCTACACTACTGCAGCCTCAAAATCAGAAGGACAAGAAGCGGTTTGCTTTGAAAAGAAGATCAAGATA TCTAATGGGAAAACCTTAGACGTTATCGGTGTGGATACTCAATTACTGCAAGTATGTATTTATGTGTTCATAAATATATT TCTATGGTTGCTGAACCTATCATCAGATATCATTAAGGCATTTGTTCATAGCCACTTTTACTTTGTCCTATCATTGATAT AGACTTATAATAGACTTTAGTATCTTTCTCTAATTTGTTTCTTTTCTGATGCTGAAGGACTCTGTCTTAAGGGGATCATT AAGTGGCAATAGAAATAATAAATTGCATTTGCTGATCAGAACATTGGAAGCAAACAGTAGTAACTGGTATGATCACTATG AAATCAAACTTCCTTTTCCAACCCAATTTTTTCAAAATCTGACAGGATTATGCTAAAAACATGATGATTTCTCAACAACC TGCATTATTTCAAGTTCATGTGACAATACAAATAATTCCAGTTTTTGATAAACACTTTGTCTCTTTGGTAACTTCAGGCG CATTGTTGTTGGATACCAACCACTTATCATCTGTGGAGAGAATAATAAGGAGCAAATGAAGAAGAAGCAAGTTTTTGAGT ATTTTCACCGTATGTTTCTGAAATTTGCAGTAGTAAGTGCAAAGCAGCTATTATGTTTGGAAAATTTTCAAATGCTAAAG TTTTGACATGTTAACTACACTGACTCTGATATGACATTCATCCTTGTATTTACACCTCAGAATGTATACCTGAGTGGACA GGATTGCACTAACCATGGCAATGATGGTAGTGTTGCTTACATAGGGAACCCTGGCCTAGTTGAGAAAGAGCCTTATTCAA TTTTTCTAAATGGAAACTCTCACTATAGCAGGTAAATATTCACTCAGTCCCAGTTTTTGTGCTTTACTCAACATCTGTGA CCAAAACTCATGAATCCTTCCTTTATATTTGAATCCTGCTAGAGAATTGGCTAATGGATTCCTTCTTCACCGAGTCAGCT CAATGCAAATTGTGGGTAACAAACTGTGCGGTTATCATCTGTGATTTTTTTTATCAAAAGTTGATGGATTTGGATATTTA TTGCCTCATTGCTCTTATTCCAAATTGTTTTTTATATATATTTATTCTCGGCACATCAAAATGAATGTTGCATGAAATTT TTAAGTCATATTATGCATGGCATAATTGGTTAAATACAACGGATCTTAGTAATCATGCCAAATGTCTAAATTTACTCTTC ATATGATCTTCCCATTACAGGTAACCTACTATATAAATTTAGTTGGTGAAGTTGCTTTCAAAAATGTGCTCCAACAGAAG GGTACAGATGTTATGTAAATATTTCCAGTTGGAGATCCAATTATTCTTTCTGGCATTGGTGCTTCTGTGCTGCCTCAAGT TCCAATTTCATCTGAAGTTTTCCCCAGCCTGCTTCCCAAACAAGAACAAGTTTTTCATTTCAAATCCATTTTTGACAACT AAGTCTATATTTTGGAATGTATTGTAATGTTTAAGAACTTGACTATGTTCAAGATTCATGTCCAGCAGCAGGATTTGTAG TTTATTCCTTCCAAGTATTGTTATGATCTTGAGAAGGTATCTTAATTGTCTAATGCAAATACACAGCTCTCTGTGCAGAC AACATTTTCACAAAATAAAGTTGCAGCCACTTGTAACTAGAAAGGGCAAGATCAAAGTAAAGAGTTGCTCTTGCAATCAG TGTACTAAATTAGTAATTAGTAAGTAATTCATTACTTTAAAATATATTAATATAAAATAAAAATGTGTGAAATAATTTAA TGGGTGTTTAGATTTGTTAGATTTGGATCTTGCAGAAATAAAAATTAACCAAAACACATAAATGCTTTCAGGTGAGTTCA CTCACCATCCATTCACATCATAAATGTTTTAGTGTGAGTTGGATCTCAAGGGATAGCCAACAGCATTAACATGATGACCA AAGTTAAAACGACTGTGATCAACTTGCCTACCCCTTCTTATGCCATGGGCTAGTATTGGAAAAGCTATTCATATAATCAG TTCCATGAATAAAAGGTAGCTTACAATCAAAAGCAGTAAGAT
CDS sequence (LotjaGi6g1v0205000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAAACATCTTGGGCATGCACTGTTATCATCCAAGTGTGTCTCTGCTTTGCTTTCTACATAGCTCTCAACTTGGG TCAACCTCAGAAATTGGTCAAAACAAATGCAAGTGGCCATGAACCTTTTGATCTCTACTTCATCAGTGTCAGAGGGGGTT TCAGACCCCATTTCCAGCAATTCCATCTTCTCAAGCAGATGGAGAAGGTGGCCAGAATTTACAAGGCAAGTTTTGTTGTG AGCAGCAGTGAGCTTGGGGAAGATGATCCTCTCATGCAGAATGCTACTCAACATTTTCCATCATTGAGAATTCCCTGGTA CAACACCTACACTACTGCAGCCTCAAAATCAGAAGGACAAGAAGCGGTTTGCTTTGAAAAGAAGATCAAGATATCTAATG GGAAAACCTTAGACGTTATCGGTGTGGATACTCAATTACTGCAAGACTCTGTCTTAAGGGGATCATTAAGTGGCAATAGA AATAATAAATTGCATTTGCTGATCAGAACATTGGAAGCAAACAGTAGTAACTGGCGCATTGTTGTTGGATACCAACCACT TATCATCTGTGGAGAGAATAATAAGGAGCAAATGAAGAAGAAGCAAGTTTTTGAGTATTTTCACCGTATGTTTCTGAAAT TTGCAGTAAATGTATACCTGAGTGGACAGGATTGCACTAACCATGGCAATGATGGTAGTGTTGCTTACATAGGGAACCCT GGCCTAGTTGAGAAAGAGCCTTATTCAATTTTTCTAAATGGAAACTCTCACTATAGCAGAGAATTGGCTAATGGATTCCT TCTTCACCGAGTCAGCTCAATGCAAATTGTAACCTACTATATAAATTTAGTTGGTGAAGTTGCTTTCAAAAATGTGCTCC AACAGAAGGGTACAGATGTTATGTAA
Protein sequence (LotjaGi6g1v0205000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKTSWACTVIIQVCLCFAFYIALNLGQPQKLVKTNASGHEPFDLYFISVRGGFRPHFQQFHLLKQMEKVARIYKASFVV SSSELGEDDPLMQNATQHFPSLRIPWYNTYTTAASKSEGQEAVCFEKKIKISNGKTLDVIGVDTQLLQDSVLRGSLSGNR NNKLHLLIRTLEANSSNWRIVVGYQPLIICGENNKEQMKKKQVFEYFHRMFLKFAVNVYLSGQDCTNHGNDGSVAYIGNP GLVEKEPYSIFLNGNSHYSRELANGFLLHRVSSMQIVTYYINLVGEVAFKNVLQQKGTDVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 301 | 301 | 7.4E-118 | – | |
| PANTHER | 1 | 301 | 301 | 7.4E-118 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| Phobius | 25 | 301 | 277 | - | – | |
| SUPERFAMILY | 59 | 289 | 231 | 7.02E-7 | – | |
| Gene3D | 83 | 300 | 218 | 6.3E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0205000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…