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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0207500 |
| Transcript ID | LotjaGi6g1v0207500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT4G02050.1 sugar transporter protein 7; Swiss-Prot: sp|O04249|STP7_ARATH Sugar transport protein 7; TrEMBL-Plants: tr|A0A1J7I8D9|A0A1J7I8D9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0207500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50530616..50535925) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAGATAAAATATCAAATATCAATCCTATATTCCTATCGAAGTATATATGCCACTGGTGCATGCACATACTGCCAAA CATTAAATACATGGTTATCTGTCACAAGTTGAAGTTTTCACAAAATCATTTAATATCTCTGTCTTTGTTGAGCAAATGGA CTGGTATGACTTTTATAAACTTTGAGCAGCATGAGAATGAAGGTTGAAGAAAAGCATTCTCCTTTGGTGTGAGAAAAGAG AGAATTAAGGAAATGGCAGGTGGGTTCACAACAGGTTCTGCTGTGGGCAAGGAGAGAGCAGAACAGTATAAGGGGAGAGT CACTGCTTATGTCATCATCGCCTGTGTTGTTGCTGCCACAGGAGGGTCTCTCTTTGGATATGATATTGGGATTTCAGGTC ATTCCATAATCCATACTCTGAATCATAATTTTCTTCATTTTCTATTTTACTTGTTTAGGTTCTTTCATAATCCATACTCA AAATGAAAACTCATCATTCACTTTGTTACTGATGCAAACCTTATCACTTCCAATCTTGTCAATACTTGATAATAGAATGC ACTGTTATCTCCCAATTCTTTGCCCCTAAACTGAGTTAGCAAGTGTTGTGAATCAAGCTATGGAGAGATGACATTCAGAA ATAGCTCCAATTAATTCCAATGCTTTAGTGTATGTTTTGGATTTTAGTTCAAAACGGTTACTAGTAAATTAGGATCACAA TTTCCGATACACATTCACTCAACGGAATGCACTTGCCAGTAGGGTGAACCTGCTTTCACATTCACCCAACACAAATCCAA AGAGAGCCTTAATCAGCCATAACAGTACTTTAGTACTTTATTCAGACTTATGTTTAGAACTTCTCTGATGTATGTTTCAT GGTTAATAGGTGGGGTTACTTCCATGGATGATTTTCTTGAAGATTTCTTCCCCTCAGTGTACAGAAGCAAAATGCATGCA CATGAAAACAATTACTGCAAGTATGACAATCAGGGCCTTGCAGCATTCACCTCATCTCTTTACATTGCTGGTTTAATTGC ATCCCTGGTGGCTTCTCCCATTACAAGGAAGTACGGACGTCGAGCGAGTATCATTGGTGGTGGTATCAGCTTCCTAATTG GATCTGCTCTGAACGCTTCAGCTGTTAACCTGGAAATGCTGATCTTCGGCCGGGTCATGCTTGGTATTGGCATTGGATTT GGGAACCAGGTAGTAACCCATTTCTCTGACCATGTTCAATCCTTATGCAGATACAATTTCTTTCTTTTTTGGTGTAGAAC ATTGAAAATAAAAACTAGACAAAAGGAGAAACCCAGATTTTTCTCTGTTTAAAGCCTAGCTCTAGATTACCCCAAGAAGT ATCAAACACTTTGTAGGGTGTTTGTTCACAATAAAGATGTAAATGGCCACATGAGTTCAAAATTTACAGGGAAAGAAAGT TAGTAAAAACAGTCTATGTTCTGAGTTAGAGCATAGTTAAGTGCAGCATGAACATCTCAATTCATAAGAATAAGTGCTTG TTTGGAACCACGTGTCCAAAGCTGTAAACATGGAACCAGTTGAAGTTTCAAGTTGTAACTTCTTCCTATACTTGCATTTG ATTATGTGCACAACTCATTTCCAAACACTCTAAGAAGAGTTTTATTCACTTTTTGTCTACAAGTGTATGCGAACGTTTGT TTATATTGGTACTCATGGATGTTTAAACATAGCCCTAAATGTTAGCATGAGTTCAAAATTTACAGGAAAGGAAAGATAGT AATGTTATGGAATATGTTTTGAGTTAGAAGTTAGAAGATAATACAACTATACCTTAAAAGTTGACAAATTTTGAGCCTCC TATTCATGGTTCTTTTTTGAAGGCTGTTCCTCTTTATTTGTCAGAGATGGCACCAACCCATCTTCGAGGAGGCGTGAACA TGATGTTTCAAGTGGCAACCACTTTTGGGATTTTCACAGCCAACATGGTCAACTATGGAACACAGAAGATTAGACCTTGG GGGTGGAGGCTATCCCTAGGCTTGGCTGCAATACCAGCTCTTTTGATGACTGTAGGAGGGTTATTTCTTCCTGAAACTCC CAATAGCTTAATTGAAAGAGGATCAAAAGAAACAGGAAGGAAGCTCCTAGAAAAAATCAGAGGGACTGAAGAGGTTGATG CAGAGTTTCAAGACATGGTTGATGCAAGTGAGTTGGCAAACTCTATAAAGCACCCGTTTCGTAACATCCTTGAAAGAAGG TACAGGGCGGAGTTGGTGATGGCAATCTTCATGCCTACCTTCCAGATCTTGACTGGCATAAACTCCATTCTGTTCTATGC TCCAGTGCTGTTTCAAACCATGGGATTCGGAAGGGATGCTTCTCTATACTCTTCAGCTGTGACAGGAGGGGTTCTTGCTT CTTCCACATTCATTTCCATTGCAACAGTTGACAAGTTGGGCAGGAGAGCTCTTCTCATCAGCGGTGGAATACAAATGATC ACATGTCAGGTAAGAAACCATGCAAATTCTAACTATGCTTAAAAAATCCATGAAGTTCGGGAAAATGCTAGACGGTGAAC CAAGTAGATTTTTCACGTTGGGGAGAAGTGATTATGGGAGAAACTAGTAGCACGTTTAGATCAGCTAAATTGATTATGGC TTTAGAATCAACTGCAGAATGATTTTCAAACATGCACTCTACAATTGATTGTAATGTCATAATCAATTCTCGAGATAAGC TTAGCTTCTGGATAAGTTGACATAAAAGACATGCTATAGTTTGCATGATCAGTAACTTAAGAGCTCATCTTAGATGAAGG GGCTAATTTTCCTAGCATCAAACTATATGAATATATGGTTGAAATGGTTGCATATAGATATAATTTGCAAAGCCAAGTAA CACCTGAAAATTTGTTCTTACAGATTTCCTATTTTCTCAAAAGAGGTGCAGTTGACTATATAATATATATTGTAAGAGAT TGATTTTACCTTCATTTTACACATGCGCAGGTTATAGTTGCCATCATTTTGGGGATCAAGTTTGGAGACACCCAAGAATT GTCCAAAAGCTTTTCTATATTGGTTGTGGTTTTTATTTGCCTATTTGTTCTAGCTTTTGGATGGTCATGGGGGCCACTTG GGTGGACAGTTCCTAGTGAGATATTTCCATTAGAAATCAGGTCAGCAGGGCAAAGCATCACAGTTGCTGTGAACCTTCTG TTCACTTTCATAATTGCCCAGTCTTTCCTTGCTCTTCTCTGCTCATTCAAGTTTGGGATCTTTCTCTTTTTTGCTGGCTG GATTACAATCATGACCATATTTGTTTCTCTTTTCCTACCTGAAACAAAGGGGATTCCCATTGAAGAGATGTCATTTATGT GGAGGAAGCACTGGTTCTGGAAAATGATACTGCCTGAAACCGATGGTGGTAGGGTATAAGTGCCAAGGAATCCGGTAATG CAATTTGGTTACCACAGATCCAAGGTACTGAATTACTGCACTGAAGAATTTGATCACAATTTGCTCATGGAGCATTTAGG AACTGAAATTATGCAAAACTGTAATTCATAAAACGAGCTTAGTGTAAAAAGTGAGCATGTATGATGAGATTATTGAATAA ATAGTTGTAATTTTGTAACATTCAAGATTAGATCAAAATAGTTTGTAGAGACAATATTTTCTATTTTGTTTTGTTTGGTG CAGAAGCTGTTCAATAATAGTAATGCTGGTACTGAATTACTAGTCTCTCTAATGCCAAACAGCTGCTTTGCCATGGATTT CTAGTTTTAATACAGCTGCTTAGGTTCTATTCAAGAAGATGCAATTTGTGGGAAATATCAATTTACTATCCAACCATTCT GGCATTCAACATGACTGAAGTTCAGTTCCCAGATAATTGTCACCAAACCATTTTATAATGCATGCAAAGAGTTAACTCAT AAAGCAGCCCAAATAAGCATCATGTTGTTTGCATTGATATACATACGAAACATCAAATTTGCATTTCGCCGCTAGCCCCT GCAAATCACACCTGAAAATTCCATCTGATGAACTGCACCTTGCCAGAGAAAATAACATTCACATGGTTCTTCACAGAGTC AAGCAGCTATATCTCAATCTCAATGACCATAAACAAACAATATAAACTATAAACTATCAAGTATTACTGCAAATACCAGA AAATTCATTACACTGAATTTCAAAACTACATCAACAAGAGTGACTGACTTTAAGATCAAACACACCCATCTAAGAAACAC AAATTTGCTACTTATTTCATATGCATTCTAACTTCAAACACTAGATTTTGAAGTGCTCCCTACCAATCAGAGTATAAGAA CCCCTGAATTTACATCATAACTAGACCCATACAAACGCACTCACTAACCTTACCTATAAACTGACACAAAGCCACCCTTT TCAGAAACCAAATAGTTACAATCTTTGATATTCCTACAAGCCTTGCTTTGCTCTTCAGCCTTCGAATTTTCCATCACTTT CTTCACTCGTGCCCAACGGCAATCCTCTTGATAGAAAAATCAAAGGAAGCCAGTGACACTCTGTGACAAGATCAAACAGT TTTCCCAAGAAAGTAGCCAACAGTTCCTCGCGTCTCACACGCAATCCATCATCATCATCAACAGTGAAATCCAGAGAACA GAACCAACCAATCCATCATCATCGTCTAATTCACCACGCGCAGCAACTGCATCAAATCACAAGCCGTAGCAGCGAGATTC TCCCTCTTGAGGAATATCGGGACCGGAACGGAGCTCGGCGGCGGCGACACCAACGAAGTCGGTCCAGCAAACATCGCGCT CGCGTCCTTCAAATCCGGAACCCTAACCTGCTTCTGCACCGTCTCAGGTTCCGGACCGAACCGATCCGTGGTTCCCAAAA CCGAATCGAAACCTCCCTCAATCTTCTTCTTCGCAGCGGCGGCGGTGGCGGGCTCAGGGCTTAGCTTCTCGCCTCTCTTG AGAATCTTGACCTGCCCCATCACGAGATTCGCACCAGGGTTTTTTACCACCACGCATGACCGATCGCCGTCGCGGCGGCC CCGATCACGGTCTTGCGAAACGGCGGCCGGAGCCCGGTTCCGGCGGCGAGTTGCGGTAGGGCTAGGGTTAGGGTTAGGGT TGTGATTCTTGTGCGATTTGGCAGGAGGTGAAGTGGGATGCGACGACGTCGTATCGTAGCGTAACCCTCTTTGAAGAATC GCGGTTCCCATTGAACGAGGTATTGATAGCAAAGAAAGAGAGAAAGAGTGTGATATACATGAAACGTGGTGTATAGGGTA TGGTTTATATATATAGGGTTAAGGTAGTTT
CDS sequence (LotjaGi6g1v0207500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGTGGGTTCACAACAGGTTCTGCTGTGGGCAAGGAGAGAGCAGAACAGTATAAGGGGAGAGTCACTGCTTATGT CATCATCGCCTGTGTTGTTGCTGCCACAGGAGGGTCTCTCTTTGGATATGATATTGGGATTTCAGGTGGGGTTACTTCCA TGGATGATTTTCTTGAAGATTTCTTCCCCTCAGTGTACAGAAGCAAAATGCATGCACATGAAAACAATTACTGCAAGTAT GACAATCAGGGCCTTGCAGCATTCACCTCATCTCTTTACATTGCTGGTTTAATTGCATCCCTGGTGGCTTCTCCCATTAC AAGGAAGTACGGACGTCGAGCGAGTATCATTGGTGGTGGTATCAGCTTCCTAATTGGATCTGCTCTGAACGCTTCAGCTG TTAACCTGGAAATGCTGATCTTCGGCCGGGTCATGCTTGGTATTGGCATTGGATTTGGGAACCAGGCTGTTCCTCTTTAT TTGTCAGAGATGGCACCAACCCATCTTCGAGGAGGCGTGAACATGATGTTTCAAGTGGCAACCACTTTTGGGATTTTCAC AGCCAACATGGTCAACTATGGAACACAGAAGATTAGACCTTGGGGGTGGAGGCTATCCCTAGGCTTGGCTGCAATACCAG CTCTTTTGATGACTGTAGGAGGGTTATTTCTTCCTGAAACTCCCAATAGCTTAATTGAAAGAGGATCAAAAGAAACAGGA AGGAAGCTCCTAGAAAAAATCAGAGGGACTGAAGAGGTTGATGCAGAGTTTCAAGACATGGTTGATGCAAGTGAGTTGGC AAACTCTATAAAGCACCCGTTTCGTAACATCCTTGAAAGAAGGTACAGGGCGGAGTTGGTGATGGCAATCTTCATGCCTA CCTTCCAGATCTTGACTGGCATAAACTCCATTCTGTTCTATGCTCCAGTGCTGTTTCAAACCATGGGATTCGGAAGGGAT GCTTCTCTATACTCTTCAGCTGTGACAGGAGGGGTTCTTGCTTCTTCCACATTCATTTCCATTGCAACAGTTGACAAGTT GGGCAGGAGAGCTCTTCTCATCAGCGGTGGAATACAAATGATCACATGTCAGGTTATAGTTGCCATCATTTTGGGGATCA AGTTTGGAGACACCCAAGAATTGTCCAAAAGCTTTTCTATATTGGTTGTGGTTTTTATTTGCCTATTTGTTCTAGCTTTT GGATGGTCATGGGGGCCACTTGGGTGGACAGTTCCTAGTGAGATATTTCCATTAGAAATCAGGTCAGCAGGGCAAAGCAT CACAGTTGCTGTGAACCTTCTGTTCACTTTCATAATTGCCCAGTCTTTCCTTGCTCTTCTCTGCTCATTCAAGTTTGGGA TCTTTCTCTTTTTTGCTGGCTGGATTACAATCATGACCATATTTGTTTCTCTTTTCCTACCTGAAACAAAGGGGATTCCC ATTGAAGAGATGTCATTTATGTGGAGGAAGCACTGGTTCTGGAAAATGATACTGCCTGAAACCGATGGTGGTAGGGTATA A
Protein sequence (LotjaGi6g1v0207500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGFTTGSAVGKERAEQYKGRVTAYVIIACVVAATGGSLFGYDIGISGGVTSMDDFLEDFFPSVYRSKMHAHENNYCKY DNQGLAAFTSSLYIAGLIASLVASPITRKYGRRASIIGGGISFLIGSALNASAVNLEMLIFGRVMLGIGIGFGNQAVPLY LSEMAPTHLRGGVNMMFQVATTFGIFTANMVNYGTQKIRPWGWRLSLGLAAIPALLMTVGGLFLPETPNSLIERGSKETG RKLLEKIRGTEEVDAEFQDMVDASELANSIKHPFRNILERRYRAELVMAIFMPTFQILTGINSILFYAPVLFQTMGFGRD ASLYSSAVTGGVLASSTFISIATVDKLGRRALLISGGIQMITCQVIVAIILGIKFGDTQELSKSFSILVVVFICLFVLAF GWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIIAQSFLALLCSFKFGIFLFFAGWITIMTIFVSLFLPETKGIP IEEMSFMWRKHWFWKMILPETDGGRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 9 | 500 | 492 | 1.9E-246 | – | |
| PANTHER | 9 | 500 | 492 | 1.9E-246 | – | |
| Gene3D | 19 | 492 | 474 | 5.9E-120 | – | |
| SUPERFAMILY | 21 | 484 | 464 | 3.53E-55 | ||
| TIGRFAM | 22 | 484 | 463 | 1.8E-114 | ||
| Phobius | 23 | 43 | 21 | - | – | |
| TMHMM | 25 | 47 | 23 | - | – | |
| ProSiteProfiles | 30 | 477 | 448 | 45.215 | ||
| Pfam | 31 | 488 | 458 | 4.1E-122 | ||
| CDD | 33 | 475 | 443 | 0.0 | – | |
| PRINTS | 38 | 48 | 11 | 3.5E-29 | ||
| Phobius | 44 | 84 | 41 | - | – | |
| Phobius | 85 | 103 | 19 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 104 | 114 | 11 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| Phobius | 135 | 139 | 5 | - | – | |
| PRINTS | 140 | 159 | 20 | 3.5E-29 | ||
| Phobius | 140 | 161 | 22 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| ProSitePatterns | 145 | 170 | 26 | - | ||
| Phobius | 162 | 172 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 173 | 191 | 19 | - | – | |
| Phobius | 192 | 202 | 11 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 203 | 224 | 22 | - | – | |
| Phobius | 225 | 285 | 61 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 286 | 310 | 25 | - | – | |
| PRINTS | 296 | 306 | 11 | 3.5E-29 | ||
| Phobius | 311 | 321 | 11 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 322 | 344 | 23 | - | – | |
| ProSitePatterns | 340 | 357 | 18 | - | ||
| Phobius | 345 | 350 | 6 | - | – | |
| TMHMM | 351 | 373 | 23 | - | – | |
| Phobius | 351 | 373 | 23 | - | – | |
| Phobius | 374 | 384 | 11 | - | – | |
| TMHMM | 383 | 405 | 23 | - | – | |
| Phobius | 385 | 405 | 21 | - | – | |
| PRINTS | 390 | 411 | 22 | 3.5E-29 | ||
| Phobius | 406 | 425 | 20 | - | – | |
| PRINTS | 413 | 425 | 13 | 3.5E-29 | ||
| Phobius | 426 | 446 | 21 | - | – | |
| TMHMM | 426 | 448 | 23 | - | – | |
| Phobius | 447 | 451 | 5 | - | – | |
| TMHMM | 452 | 474 | 23 | - | – | |
| Phobius | 452 | 473 | 22 | - | – | |
| Phobius | 474 | 506 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0207500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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