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LotjaGi6g1v0207900.1

Overview

Field Value
Gene ID LotjaGi6g1v0207900
Transcript ID LotjaGi6g1v0207900.1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G46920.2 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein; Swiss-Prot: sp|A7J1T2|M313A_XENLA Mitogen-activated protein kinase kinase kinase 13-A; TrEMBL-Plants: tr|A0A072V8Y3|A0A072V8Y3_MEDTR Octicosapeptide/phox/Bem1p domain kinase superfamily protein; Found in the gene: LotjaGi6g1v0207900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:50556241..50556974) extracted from Lotus japonicus Gifu genome v1.2.

CTCTCTTTATATTTCTTTTATTCTGCTTTCATGATCAAAACTGTTCTTAGCACAGAGCAATTGAATGTATATTGTGTATA TTGTCCAATATCCTGGTTATTTCAACTTCTGATTCTGAAACCAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAG ACTCTAATATCTGGTGGCGTGAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAATGGGAGCAGTAGCCTTGTTTC AGAGAAGGTTTATGCTCGAAACTTTGATTTACTCTGATACCTCCTTTATATTTTGTCATTCTCTAAACTTGTTCTGCGTT CAATTTTCTGGTGTTTCAGGTTGATGTATTTTCATTTGGCATTGTCATGTGGGAACTCCTGACAGGAGAAGAACCTTATG CTGATTTACACTATGGAGCCATAATAGGTAATCCAAAAGGTTGATGAATCCATACTTAGATTCCGATTCAGTAGCTTTTG GTTATTGAGCTGTGTGTTTTTCCAAACATAATTCAGGTGGTATCGTGAACAACACTTTGCGGCCTCCAGTTCCAGAATCT TGTGACCCAGATTGGAAAGTGCTGATGGAGAAGTGCTGGTCATCAGAGCCATCAGAAAGACCAACCTTCACTGAGATTGC CAGTGAATTACGTTCCATCGGAAGCAAGATCTCTCCCAAAGGACAGAATCAACAGCAGCAACCTGCTTCATCTCAGAGTC AAGTGCAGAAATAA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0207900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATCAAAACTGTTCTTAGCACAGAGCAATTGAATGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACTCTAAT ATCTGGTGGCGTGAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAATGGGAGCAGTAGCCTTGTTTCAGAGAAGG TTGATGTATTTTCATTTGGCATTGTCATGTGGGAACTCCTGACAGGAGAAGAACCTTATGCTGATTTACACTATGGAGCC ATAATAGGTGGTATCGTGAACAACACTTTGCGGCCTCCAGTTCCAGAATCTTGTGACCCAGATTGGAAAGTGCTGATGGA GAAGTGCTGGTCATCAGAGCCATCAGAAAGACCAACCTTCACTGAGATTGCCAGTGAATTACGTTCCATCGGAAGCAAGA TCTCTCCCAAAGGACAGAATCAACAGCAGCAACCTGCTTCATCTCAGAGTCAAGTGCAGAAATAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0207900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIKTVLSTEQLNVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGA IIGGIVNNTLRPPVPESCDPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPKGQNQQQQPASSQSQVQK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 130 130 17.39
IPR000719
SMART
SM00219
1 127 127 1.3E-4
IPR020635
Gene3D
G3DSA:1.10.510.10
3 154 152 1.2E-36 –
Pfam
PF07714
8 127 120 4.1E-26
IPR001245
SUPERFAMILY
SSF56112
11 125 115 5.05E-31
IPR011009
PANTHER
PTHR23257:SF797
13 142 130 4.4E-105 –
PANTHER
PTHR23257
13 142 130 4.4E-105 –
MobiDBLite
mobidb-lite
131 154 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0207900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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