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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0208100 |
| Transcript ID | LotjaGi6g1v0208100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDP-fucose O-fucosyltransferase 2; TAIR: AT1G17270.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8WR51|OFUT2_CAEEL GDP-fucose protein O-fucosyltransferase 2; TrEMBL-Plants: tr|A0A1J7GQ07|A0A1J7GQ07_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0208100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50582063..50585721) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTTCTCTTATCACTTATTCTTGTAAATCAAACAAAATGTTAATACTGCTTCCAAACAAAGCATAACACCATAATAC TCCAACAGCCACTAGTTGAAATGTCAAATGGGACCCACAAAACCTGAAGTGGGTGGGTCAGTAACCGGTAATTTAAGTTT TCAACTACCGACGCAGTTCCATTTGCCTCCTCTCTGGGTTTCTCCTCCGCACATCTTTCCTAACTCGCTCACCGCCACTC ACTCTCCCCCACCGAGTCACACTCACCGACACACCGAGTGGAGATCCAACCCAACGATTCACCAACTCGGTAACTCACAT TGATTCAACACCTCCACCGCCACCGAGTCACCCACTCACTTCCCCGCCGTGGCTAAATCAACACAGATGGAATCGTCTTC CGACGAGGAAGACGACCGCCACAACCTCATCCAACAGAACGAGAGGAGGAAGCCTCGCACTCCTCCTCCCTCCACCGCCG CCACATTCCACGTCGAAGATTTCACCTCACGATGCCGCCGCCTCAATTTCCGCCTCCAGAAGAAGCACATTCTCGCCGTT CTAGCTCTCCTCCTCGTCCTCATCTTCTACTCCGTCACCGATCTCCGCAGCCACTTCTCCATGCCCTCCTTCAAGTTCGA TTCTCTCGCCGATCAAATGAAGGAGTCCGAATTGCGCGCCATTAACCTCTTGCGCCAACAGCAACTAGGGCTCTTAACCG CTTGGAATCGCACTTCCCAATCCAACACTTCAGATCCGAACTTGGAGGATCTGAAATCTGCGTTGTTCAAGCAGATTTCC ATCAACAGAGAGATTCAGCAGATTCTGCTGAATCCACACCGGACAGAGAACGTGGTTGAGCCTGAATTCGATTTCGGAAA CGCTAGTTTAGGGTTTGATGGTGCTGATTACGACAGATGTAGAACAGTGGATCAGAAACTTTCACAGAGAAGAACAGTTG AGTGGAACCCTAAAGATGGGAAGTTTTTGCTTGCTATTTGTGTTTCTGGTCAGATGTCAAACCATTTGATTTGCTTGGAG AAGCACATGTTTTTCGCGGCGCTTCTTAATCGAGTGTTGGTTATTCCTAGCTCCAAAGTGGATTACCAGTATGATAGGGT TGTGGACATTGATCACATTAACAAGTGTTTGGGGAAGAAAGTGGTGGTTTCCTTTGAAGAGTTTTCGAAGACTAAAAAGG ATCACTTGCACATTGACAAGTTTCTGTGTTATTTTTCGAAGCCTCAACCTTGTTATTTGGATGATGATCACTTGAAGAAG TTGGGTAATTTGGGTTTGTCTATGAGTAAACCTGAGGTTGTTTGGGATGAGGATATCAAGAGCCCGAAGAAGAAGACAGT TCAGGATGTTCTGGGGAAATTTGAGCATGGTGATGATGTTATGGCAATTGGGGATGTGTTCTATGCTGAAGTGGAGAAAG AATGGGTGATGCAACCGGGTGGGCCAATTGCGCACAAATGCAAGACGCTGATTGAACCTAGTCGGCTTATTTTGCTCACA GCCCAGCGTTTTGTTCAGACATTCCTTGGGAGGAACTTCATTGCATTGCACTTTCGGAGACACGGTTTTTTGAAATTCTG GTATAGCCTTTCTTCCTTGTTTTTTCATTAAGCACTGATAACAGCCATTTACATAGATCACTTGAGTATGATATGTTTGC TGACAACATTGCTTGCATCTGCATGTTTTCTGGCTAGTGAATTGCTGACTGCATTTTCATGGCTCATCTTGAATGTTGTA GCTGTTTGCCTTAATATAAGGCTTTTGCCTCATGAGAGAAATCAGAAACTGTTTTGCAGTGCATTTTTTTATTTCCCTTT GTATTGCATCTAATGATTCATTTTTCATGTTCACAGCAATGCTAAGAAACCGAGTTGCTTTTACCCCATTCCTCAAGCTG CAGATTGCCTCTTGAGGGTGGTTGAGAGAGCCGATGCGCCTGTCATTTATCTTTCTACCGATGCAGCAGAAAGTGAAACT GGTCTGCTTCAGTCACTAGTTGTGCTGAATGGCCGGCCTGTTCCACTTGTAATACGCCCAGCTCGAAATTCAGCTGAAAA ATGGGATGCTTTGTTATACAGGCATCATATTGAGGGAGATTCACAGGTGAGATGACAGGGCCTCTTAATATTTTCATGTG GTTTAAAGTTTAAACTTAATATAACTGAACTCAATTCCCCATCCATTGATGATCTTTGGAGTTTGTTGCAAATGAATAAG TAAATAAATCTTTTAAGAAGACTTAAACATATCAGTTGATCATGATTCCCTTGTTTGTTTGAAATTGTGGGTTGCAAGAT CTGGAAGGATTAGAGCCTTTTCACCATTCTCAAGAGGCCCTTTGAAGCCTAAAAGAAATCTTATAATTCTCATTCTGTCA ATCTGTCATGAAAGCTATCCACAGTTTACTTTCAGGAAGATAATTAAGAACTTTAGACCCTATGGTATTCACATTGTTGG TTTCAGTTGTCATGCAGTGGTGATGGCTTCCGCTGATTTGGTGTATTGCTGAAAAAACCTGCAGTGTCTTATATGATAAA ATACCCCAATCTTAGTTTGTTGAGACTTGAGAGTCCTACATTAATTAGAGATATGACCAAAAAAATCCTTTAAAGGATAA GCTAGTTTTTTGGGTAGAGTTAGATTTAACCTAAATTCTAAGATGGTAGCAGCCTCTATTCTAGATCTGTTTATTTGAGG CATCCATATACACCCGCAGATGATCCTTCCACCAAATTCCACACTTCAGATGTTCATCCCTCGGGGTGAGGGGTTGTTTT GAGAAGGCTCACATTGACCAGAGATATGGCCAAAGGAGTCCTTATAAAGGGTAGAGCAACCTCACTTTTAACCTAGCTTT GGGGGAGTTAAGCTTAACCCAAATTCTAAGCATTGTGAACTTCTAGTTGTGTGGTTCTTTCCTCACTTCAACTTGCTAAT CCTTTGTATGAGCTGGTTACTCTCTTAATTTCTTTTGCTGATGTTCATTACAAACATTTTCACACTGAAGGTGGAAGCTA TGTTAGACAAGACTATATGTGCCATGTCTAGCGTTTTCATCGGAGCACCTGGTTCGACTTTCACTGAAGACATCCTGCGG CTGAGAAAGGACTGGGGATCAGCATCGTTGTGTGATGAGTACCTTTGCCAAGGGGAAGAACCAAATATTGTAGCAGAAAA TGAATGAAGAATGAATAGAAGACAGGTTTCTCGTTCCGTTACTATTTGTTCAATGATAGGTGTGTTTCGATTTTTTCAAT GTGCCATTTATGATGATAGAATTGGCAATGTTGTTGTTGATAAGTTTTACTGTACTTCTTATACGTATTCTTTTATCACA TTGATTACCATTTGTAAAATATACACATTGATCCTGAATTTTGATCCCGAGCAATTGTGTATTGTGTAGATTATTTAGTT TTAGTAAACGTCAGTTAATTATAAGAAGCTTTATTTTTAGCGTACTACACATGGATCATATGATACGAAATACAAATAAA TGGATTCACATAGTGGTTCAGTACTTTGCCCAACTCATATGAATAAAAAAAAATTCATTGTCAACCTCCTACCGCTTAGT GTGCTAACCTTGAGATGAATGATTAGGTCTTGAGATGAATGATTAGGTCTTTCTCACAC
CDS sequence (LotjaGi6g1v0208100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCGTCTTCCGACGAGGAAGACGACCGCCACAACCTCATCCAACAGAACGAGAGGAGGAAGCCTCGCACTCCTCC TCCCTCCACCGCCGCCACATTCCACGTCGAAGATTTCACCTCACGATGCCGCCGCCTCAATTTCCGCCTCCAGAAGAAGC ACATTCTCGCCGTTCTAGCTCTCCTCCTCGTCCTCATCTTCTACTCCGTCACCGATCTCCGCAGCCACTTCTCCATGCCC TCCTTCAAGTTCGATTCTCTCGCCGATCAAATGAAGGAGTCCGAATTGCGCGCCATTAACCTCTTGCGCCAACAGCAACT AGGGCTCTTAACCGCTTGGAATCGCACTTCCCAATCCAACACTTCAGATCCGAACTTGGAGGATCTGAAATCTGCGTTGT TCAAGCAGATTTCCATCAACAGAGAGATTCAGCAGATTCTGCTGAATCCACACCGGACAGAGAACGTGGTTGAGCCTGAA TTCGATTTCGGAAACGCTAGTTTAGGGTTTGATGGTGCTGATTACGACAGATGTAGAACAGTGGATCAGAAACTTTCACA GAGAAGAACAGTTGAGTGGAACCCTAAAGATGGGAAGTTTTTGCTTGCTATTTGTGTTTCTGGTCAGATGTCAAACCATT TGATTTGCTTGGAGAAGCACATGTTTTTCGCGGCGCTTCTTAATCGAGTGTTGGTTATTCCTAGCTCCAAAGTGGATTAC CAGTATGATAGGGTTGTGGACATTGATCACATTAACAAGTGTTTGGGGAAGAAAGTGGTGGTTTCCTTTGAAGAGTTTTC GAAGACTAAAAAGGATCACTTGCACATTGACAAGTTTCTGTGTTATTTTTCGAAGCCTCAACCTTGTTATTTGGATGATG ATCACTTGAAGAAGTTGGGTAATTTGGGTTTGTCTATGAGTAAACCTGAGGTTGTTTGGGATGAGGATATCAAGAGCCCG AAGAAGAAGACAGTTCAGGATGTTCTGGGGAAATTTGAGCATGGTGATGATGTTATGGCAATTGGGGATGTGTTCTATGC TGAAGTGGAGAAAGAATGGGTGATGCAACCGGGTGGGCCAATTGCGCACAAATGCAAGACGCTGATTGAACCTAGTCGGC TTATTTTGCTCACAGCCCAGCGTTTTGTTCAGACATTCCTTGGGAGGAACTTCATTGCATTGCACTTTCGGAGACACGGT TTTTTGAAATTCTGCAATGCTAAGAAACCGAGTTGCTTTTACCCCATTCCTCAAGCTGCAGATTGCCTCTTGAGGGTGGT TGAGAGAGCCGATGCGCCTGTCATTTATCTTTCTACCGATGCAGCAGAAAGTGAAACTGGTCTGCTTCAGTCACTAGTTG TGCTGAATGGCCGGCCTGTTCCACTTGTAATACGCCCAGCTCGAAATTCAGCTGAAAAATGGGATGCTTTGTTATACAGG CATCATATTGAGGGAGATTCACAGGTGGAAGCTATGTTAGACAAGACTATATGTGCCATGTCTAGCGTTTTCATCGGAGC ACCTGGTTCGACTTTCACTGAAGACATCCTGCGGCTGAGAAAGGACTGGGGATCAGCATCGTTGTGTGATGAGTACCTTT GCCAAGGGGAAGAACCAAATATTGTAGCAGAAAATGAATGA
Protein sequence (LotjaGi6g1v0208100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSSDEEDDRHNLIQQNERRKPRTPPPSTAATFHVEDFTSRCRRLNFRLQKKHILAVLALLLVLIFYSVTDLRSHFSMP SFKFDSLADQMKESELRAINLLRQQQLGLLTAWNRTSQSNTSDPNLEDLKSALFKQISINREIQQILLNPHRTENVVEPE FDFGNASLGFDGADYDRCRTVDQKLSQRRTVEWNPKDGKFLLAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKVDY QYDRVVDIDHINKCLGKKVVVSFEEFSKTKKDHLHIDKFLCYFSKPQPCYLDDDHLKKLGNLGLSMSKPEVVWDEDIKSP KKKTVQDVLGKFEHGDDVMAIGDVFYAEVEKEWVMQPGGPIAHKCKTLIEPSRLILLTAQRFVQTFLGRNFIALHFRRHG FLKFCNAKKPSCFYPIPQAADCLLRVVERADAPVIYLSTDAAESETGLLQSLVVLNGRPVPLVIRPARNSAEKWDALLYR HHIEGDSQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSASLCDEYLCQGEEPNIVAENE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| MobiDBLite | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 53 | 53 | - | – | |
| PANTHER | 4 | 546 | 543 | 1.8E-266 | – | |
| PANTHER | 4 | 546 | 543 | 1.8E-266 | – | |
| Phobius | 54 | 71 | 18 | - | – | |
| TMHMM | 54 | 71 | 18 | - | – | |
| Phobius | 72 | 546 | 475 | - | – | |
| Pfam | 221 | 520 | 300 | 1.3E-10 | ||
| CDD | 362 | 520 | 159 | 1.00076E-18 | – | |
| Gene3D | 370 | 534 | 165 | 1.1E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0208100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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