Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0208300 |
| Transcript ID | LotjaGi6g1v0208300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27; TrEMBL-Plants: tr|A0A151R2Q9|A0A151R2Q9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0208300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50604435..50609807) extracted from Lotus japonicus Gifu genome v1.2.
CGCGTGCACGGTACACTAAATGTAGGTGTCAATGCATAATACAAAATTCCCAGTTATTGACGATAGCTACCTTAATTAAT TCTTTAAGTTTAATATTTACGTTAATCACGTTTGGAAATTAATATCTTATTGTAAAGAATTAGGCCCTTTACCACAAAGC ACATAGATCAATCAACTGACACCATATTTTTCTAACTTAAGTTTTAGATTCGAATCTTTGCGAACCATATTAAGAGAGTT TTATCATTGATAAAAGTTTTATCCGGCTCAAACAATATTGTCAAAATGTGATTTCAAGATGCATAATATACATGACAACT TAATACACACACAAGAAAGGAGAAACCGAGTTTAAGCCACGTTTTCATAGGAAATTCTGGAGCATAAGCATAACGTGTCT AGTTCTGTTTCGTTTCCTTTCCACGGACACCAATTCTCTTCAAACACACTTTTACCTACATATTCTCAGGAATCTTCTTG ATCCTTCTATCTACCTCTCTGTGTCTACAGCAGCATAAGCCAAAAGTTGCATCAAGTGTCTTATAACCTTTCCATACCAA CACAACAAGTTGCTCAGTCAAAGATAGACGTCACCATGTGTGTGCAAGATGCAGAGCAAGTTGCCCCTGCAGATATGGAT AACATGGGGAACACCAAGAACTCATGGCCTTTGTATCCTGAGATTTTGATTACTACCCAGATGGAGAACTGGGAAAAAGG ACCCTCTTTGAGACCTTCAATTCAAAGTTCTTTTCCTGTGAGTATATGGTGTTCCCTGATATATTTCTGTTGTTAAATGG TTTTTGTCAATTTTCATCTATGTTTTAGCTCAACCCCTTTTTTTCCATCTGTGGTATTTTTAGCTGGAAAGCATATGTGA GGACACAGTGATTGCAGATAAGAAACAGAACATGGTGAATTTTATACCTGCTCTTCGGTCTGGAGTGTGGTCTGATATTG GAGACCGCCCTTACATGGAAGATACCCACATATGCATTAAAGATTTGGCAAAGCAGTTTAATTTTGATAAACAATCTAAG GAAGCTGTTTCCTTTTATGGTGTAAGCCCTCTACCCCAGTATGCTGAATTGCTGATTCCTTTCTGTCCTGAATTTCAATT TAATTCTTGTTTTTGTGATAAGATATGAATGATTTAAACATTCTTGATCCATCACTGTATTGAGACTATCAAGCAAGTCT TGAAGAATATGATGTATCTAATGATGAATATCTTAAAGCCAGGGAGTTCATTTTAGATGACCAAATGACCAGAAAATTTA TGATCCTATTAGATTTCATTTTCCATTAACCTATGCATGCAGCTGATATTCACTTATTGAATACTTGAAGTAGGTATTCA GCATTGAGAATGTCTCCTTGTTAAGTTAATAGTGACATTCTGACCTCCCATCTTCTTCATTGTCACTCCTTGTCTTCCCA ATTCCTAGTTGTAGTTGCATAACCATTTTAGTATACATTCGGTATTTTATTAAACTCAACGCTATCAACATTTGAGTCAA CGTAGCAAAATCTTACTTCTTTTGTTGATACGTTGGGATGTGTGTTTTTCCCAAACAGGTGCGGTTGACTTCAGAAAATG TGGATAACAGAATGATATGAGGATAAACATCTTTATGGTCAATTTGCATAGGATTATTGGAAACCTTTAATTAGGACTTA ACATGTAAAAGGTAAATGGTCCAATGTGCAGGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTCGTCCGTGATC ATCTGCCAAGACTTATTGTTGAGGATGTTAACTTCCCTTTGGAGCTAGAGAAGGTGGTCAAAAGGTCATTTATGGAGACT GATGCTGCATTTTTAAAAGTATCTTCTCATGAGTCTTCCCTTTCTTCTGGTACAACTGCTCTAACTGCAATCATATTTGG AAGGTGAGAACTTGTATTACTGCTCTTTAGCTGTCAGAAGTGTAGGACGAATTTTCCAGCAACATTTGGGTTTGACCTTT CAGTTTCATATGATATCAGCAAATGTGAAAGTGGCACATTGACATTAGATTCCTTTTGTCTCATAGATTCTTGCCTATAT ATCACTGACGTTTCATTCTCTTGAACAGGTCATTACTTGTAGCCAATGCTGGAGACTGCAGGGCTGTAATGTCCCGTCGA GGAAAGGTGATAGAAATGTCCAAAGATCATAGGCCAAACTGCATTAAAGAAAGAATGCGGATCGAGTCCCTGGGTGGATT CATTGATGACGGTTACCTGAATGGTCAGTTAGGTGTCAGTCGTGCTCTAGGTGATTGGCACCTTGAAGGAATGAAAGAAA TGAGTGAAAGAGGTGGACCACTGAGTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATA ATTGCTAGTGATGGGGTTTGGGATGTTTTTAGCAGCCAAAATGCTGTGGATTTTGCTAGAAGGAGGCTACAAGAGCACAA TGATGAGAAACTGTGCTGCAAGGAAATAGTGCAGGAAGCAATCAAGAGAAGATCAACAGACAACTTGACTGTTCTGATGG TGTGTTTTAACTCAGAACCGCCACCAGCTGTGGCTGTGGATAGAATAAGGGTAAGGAGAAGCATATCCGCAGAGGGACTT CAGAATCTTAAATGTCTGCTAGAAGGGTAGTGACATTTTTCCATGCAAAACAAATGGTATAGGTTACTTGTAGAGCTTAA TTATGTACAGATTCATCCACCACACAGAAAGAACCAACTAATGATTGGCCTAGTCCCAACCTTTGGAGGATGGAGAAAAA GAGCTGTATGAAGAAGTGTCACTTTCTAGTAAAATTATAAAACTATATCATTATAATTATCTTTCCCACTGTGTGATTGG GAAAGCTAGAGTGCTACTGATAGGAGGAGAAAAGTAATGTATCAGAAACAATGTGATTTGTACATATTATTGTTCACATT CTAGCTTTCTTAACATGAACATTCTTATACATTTTACATTTTGTATTTATTATCAGCAAATAGAGCATGAAAATGTGAAA CCAACAAAATTATCAGCAACAGAAGCTATTTCTTAACATGAACATTCTTATACATTTTGTATTTATTATCAGCAAATAGA GAATGAAAATGTGAAACCAACAAAAATGAAGCATTCAACAATCTCTCCATCAATGGCTATTTACTGTGAAAAAGGCATAC ATGTAACATCAATATAGATCCTATACTGAACAATCAAATGTGTTTCTAAATATTTAAAACCACTATCCTGAAAACTTCTC TCTTATCTCAGTTCTAGCAACACGAATCAAGAATAAACCAGCAAAGAAAATAGACAAAATGAGCATAAAAAATACACTGT TCCATCCCCTAGTTGAAATATACCCAGCCATAAGTGGTCCAAGAGCAGCTCCAACAGAACCAGTACCATCTATGATTGCA GTAACAGTAGCCAGTGCCCGTGAGTTCCCACCATTCAAGCTCTGTGTACCGAGATCGGCAGCCACAGCAGTTGTGATTAG TGAGTATGGACCATTCACCAAAAATCCAGAAAGAAACATTAAAGAGATGTTGGTCAACATAGAGATACTTCCAAAAGCAC GATACAAAATGAGAGCTGGAATTGAAAGAAACAAGAACAGAATTGAAGTAATGGCACGAGCTTCAATCATATCAGAAATG AAACCCGCAGTGATTCCGCCTAGGACTCCTCCAACGTCAAATATTGTTGAAAGTAAACCAGCAGTTTTGTGAGACAAGTG CACACCCGCAACCGCTGCAATGAACACAAAATCAGAAATTAAGTAAAGAACATCATGGAAAACTGCAAATCGACACTAGC TATGTAACTTAGCATTCCAAATTCATAGAAGCAAACCTTGAAGACAGTGTATAAGGAAGGAGTAGCCAATAGTAATAAAA TGAGTAGAAATGATTATAGGAATAGCATGCTAGATAAGAAAACAATTCCAACTCTATATGATATCATATATTATTGCATT GAAAATCATTTACCTGTGTGCCTTATGTAGAATGGCAACCAATACAGAAAAGTGTAAGCCACAAGCTTAGAGAAAAAGAG GCAGAAAGCAAACGGAGCCACTCCCGGCAACTTCCATGCCTCTAGAAACCCAATTGCAGATGAAGAATCTGAATTATCAG GCTCAATAAGCTTTGCTTCCTCTGATTCCACTTTCTGCTGATTCTCTTCACTGTGTATTTCAGCTTCAGCACTCATTTCA ATGTCCATTCCAGAATGTGCAAACCCCATATCCTCAGGGTTCACAACAAGAAACAAAAACACCAAAACCCCTACAAAAAT AATCAGAAATCCAGGCAACAAAAATGACCAACCCCATCCAAATTCCAAAGCTCCTGAAGCCACAACCGAACCAATGATAT TCCCCACCGAGGTATGCGAGTTCCATATCCCCATTATCAATCCCCTCTTCGATTCCCCCAGCCAATTCCCCACAACAGCA ACCACACAAGGCCACCCAATTGACTGAAACACTCCACAAACAATCTGAACACCAACAAAAAACCCCAAAACATGAACATC CAACCAATATCCTAACCCGAAAAGCACGGTGAAAATGCCACTACCCATCATCCCAAACACAAGGAACAACCTCAAATCAA TCCGATCGCCAACATGACCCGCCAAATACATGCCAACCGAGTACGAAGTAAGGAATGCGAGATCAAGCTCGCCAAGCCGG TGAGTGCCACGAGTTCCATTAAAAGGCGGCCAACCCGAATCAACTTGAGTTAAATTGGATGCAACAGTTGGTCCTAGTAC ACTCTTGACAATACTGGGGGGCTTCCTAGAGGCATGGAAGGAAGCATAAGCAAGGAATGTGATAACAAGAACAGAGATTT GGTGAAACAGTAGGGTTTTGTGAGGGGGTTTCAAGCCTGGGAAGAGTGTCAGAGCTGGAGCTAAGCTCAAACTCTTGGAT TTCATTGTTGTACATAAGGATTCTAGAGTGCATTAAGAATCTAATATAATCTAATCAAATCTAGCACAAAGTTACAAAGA TCAAAACTTTCCCCTAGAATATTAGAATCTATGATCTGAAGAATGTGAAAACTAGATCCCAAGATTGGAATTGCATACCA AATGATTAGAAGGGTTTCACTGAGACACGATTGTTGGCAGCAAATCTCAAATTTGACAGAGAAGGGGATTTGGGTGAGGA GGGAAGTGGTGAAAGTGACGAACTTTAACGGATTTATGGAAGTATGAAGGCTTAGAATTGCAGAAACCGGTGAAGAGCAA AGTACAAAGCGTTTGCGTGGAAGAACACCATTCGTGTCCAAATCAGACTACGCGATTCGTCGAAAATGTGAACAGAAAAT TCTAAAGTACGAA
CDS sequence (LotjaGi6g1v0208300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGTGCAAGATGCAGAGCAAGTTGCCCCTGCAGATATGGATAACATGGGGAACACCAAGAACTCATGGCCTTTGTA TCCTGAGATTTTGATTACTACCCAGATGGAGAACTGGGAAAAAGGACCCTCTTTGAGACCTTCAATTCAAAGTTCTTTTC CTCTGGAAAGCATATGTGAGGACACAGTGATTGCAGATAAGAAACAGAACATGGTGAATTTTATACCTGCTCTTCGGTCT GGAGTGTGGTCTGATATTGGAGACCGCCCTTACATGGAAGATACCCACATATGCATTAAAGATTTGGCAAAGCAGTTTAA TTTTGATAAACAATCTAAGGAAGCTGTTTCCTTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTCG TCCGTGATCATCTGCCAAGACTTATTGTTGAGGATGTTAACTTCCCTTTGGAGCTAGAGAAGGTGGTCAAAAGGTCATTT ATGGAGACTGATGCTGCATTTTTAAAAGTATCTTCTCATGAGTCTTCCCTTTCTTCTGGTACAACTGCTCTAACTGCAAT CATATTTGGAAGGTCATTACTTGTAGCCAATGCTGGAGACTGCAGGGCTGTAATGTCCCGTCGAGGAAAGGTGATAGAAA TGTCCAAAGATCATAGGCCAAACTGCATTAAAGAAAGAATGCGGATCGAGTCCCTGGGTGGATTCATTGATGACGGTTAC CTGAATGGTCAGTTAGGTGTCAGTCGTGCTCTAGGTGATTGGCACCTTGAAGGAATGAAAGAAATGAGTGAAAGAGGTGG ACCACTGAGTGCTGAACCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGGG TTTGGGATGTTTTTAGCAGCCAAAATGCTGTGGATTTTGCTAGAAGGAGGCTACAAGAGCACAATGATGAGAAACTGTGC TGCAAGGAAATAGTGCAGGAAGCAATCAAGAGAAGATCAACAGACAACTTGACTGTTCTGATGGTGTGTTTTAACTCAGA ACCGCCACCAGCTGTGGCTGTGGATAGAATAAGGGTAAGGAGAAGCATATCCGCAGAGGGACTTCAGAATCTTAAATGTC TGCTAGAAGGGTAG
Protein sequence (LotjaGi6g1v0208300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCVQDAEQVAPADMDNMGNTKNSWPLYPEILITTQMENWEKGPSLRPSIQSSFPLESICEDTVIADKKQNMVNFIPALRS GVWSDIGDRPYMEDTHICIKDLAKQFNFDKQSKEAVSFYGVFDGHGGKSAAQFVRDHLPRLIVEDVNFPLELEKVVKRSF METDAAFLKVSSHESSLSSGTTALTAIIFGRSLLVANAGDCRAVMSRRGKVIEMSKDHRPNCIKERMRIESLGGFIDDGY LNGQLGVSRALGDWHLEGMKEMSERGGPLSAEPELKLMTLTKEDEFLIIASDGVWDVFSSQNAVDFARRRLQEHNDEKLC CKEIVQEAIKRRSTDNLTVLMVCFNSEPPPAVAVDRIRVRRSISAEGLQNLKCLLEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 21 | 359 | 339 | 1.0E-162 | – | |
| PANTHER | 21 | 359 | 339 | 1.0E-162 | ||
| Gene3D | 59 | 349 | 291 | 5.9E-87 | ||
| SMART | 69 | 342 | 274 | 4.4E-87 | ||
| SUPERFAMILY | 71 | 346 | 276 | 3.14E-77 | ||
| ProSiteProfiles | 79 | 344 | 266 | 51.819 | ||
| CDD | 79 | 344 | 266 | 1.39272E-88 | ||
| Pfam | 91 | 336 | 246 | 3.0E-70 | ||
| SMART | 94 | 344 | 251 | 0.0077 | ||
| ProSitePatterns | 118 | 126 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi6g1v0208300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…