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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0209400 |
| Transcript ID | LotjaGi6g1v0209400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nodulin-like / Major Facilitator Superfamily protein; TAIR: AT1G80530.1 Major facilitator superfamily protein; Swiss-Prot: sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4; TrEMBL-Plants: tr|A0A072V983|A0A072V983_MEDTR Nodulin-like/MFS transporter; Found in the gene: LotjaGi6g1v0209400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50688323..50692428) extracted from Lotus japonicus Gifu genome v1.2.
ATAACATAACATTAAGACCGAAAAAGATATTACTATTTCAATTTCGACAATCATATGCGCACCAAATTTCATAACATTGA AACTTGTGATATTATTTGAACCTTATTTTGGGGAATTACCATTCTATTTTCACTAATCACTACATCACCATGCTTTTAGT CCCATTTCAGATTTTGTCCCATTAATGATGGTTGGTAACGTTTGATACTCTGATGAAATAAGAAACACGTTGATCTGGTT TCGCAAGAACAAACTACCATAAACGACACAATCACAAGGAATCACGCGCAGAGAGACACTGAGAGAGTTGAGAGTTGAAC CGATGTTGACACTGAAGGGAGGAAGCAGGCCACCGTGGGTAGGTCTAGGAGCAGCGGTGTGGGTTCAGATTGCTTCCGGC AACACCTTCACTTTCGCTCTCTACTCTCACTCTCTCAAATCCGTTCTCGGTTTCAACCAGCGCCAGCTCTCTCTCCTCGG CGTCGCCAACGATCTCGGCGAGAATTTTGGCATCCTCCCTGGTCTCGCCTGCAACAAGTTCCCGCCCTGGCTCCTCCTCT GTGTCGGTTCTCTTACCTCTTTCCTCGGTTATGGTGTTCTCTACCTCGCTCTCACCAAAACCGTTTCCATCCCTTACTTC GTGGTAACTCAACTAACTAGTAACTACTCTCTCTATACAGTGATTATATGCTCTGTTTTCTTTTGTTAAGTTCATTAGAT CCATGATTATTATTATGTTATTCATTGTTGCAATTTTTATAGATTAGAATCTAATAATTGATGCAAGCTTAGAGATCTCA AGATAAACAACTATTTTATCAGGAAATGAAAAATTTAGTGCTGAAATATTGCATGTTTGGAAATTATTTTATAATTGGTT CTGAAGTGGGGAGAAGCTTATGTGAGTAGCTTGTGACTTTCAAAATTGATTCGGATGGAAGAGAAGCTGACCCAAACATG TTATTAGTGTTCTTTCTCATGTCCTGTTGTCTCAAATTAGAATGAGAAAAAAGGGGGTTAGCAGCATGAATATTTTCCAA ACTAGTAACTACTCTCTCTACTTGTTTCTGATCCCTGTTTGCTTGAGTTTCATGAAGAAAAAAATCAAACTTGGTTACTT TATCTGTTTATACACGCAATCTTTATAGATTATAATCCAATAGTTGATACAAGCTTAGAGATCAAGATAAACCAACTATT TAATCAGGAAATGAAAATTTTAGTGACACAATAATCTGAAATGTATACACTCGGTGCATGTTTGGAAATTATTTTATAAT TGATTCTGAAGTGGGGAGAAGCTGTCTTTCAAAATTGATTCTGATGAAGAAGAAACTAATTCAAACATGCTATTAGTATT CTTTCTCAGGCCCTGTTGTCTCAAATTAAAATGAAAAAAAAAAGGTGGATTGGGGATGAAGAGTTTCTTTCATGAGTATT TTCCTTATGACAGTCATGAGTTCAGTGTTGCATTTTGCATCCCATATAATTCGACTGAAAAGACATGATTTTGAAGTGGG GAGAAGCTTATGTGAGTAGCTTCTGATGAAAGAGAGACTAATCCAAACATGCTATTAATATTCTTTCTCGAGGCCTGTTG TGCCAAATTAAAATGAGAAAAAGGGGGGGGGGGGGGGGGGGGGGGGTTAGGAGTGGATTGGGGATGAAGAGTTTTTTTCA TGAAAATTTTCCTAAAGGTTTTGAAGATTTCAGTGTTGCATTTTGCATCCAATATAATTTGACTGAAAAGTCCTGATTGT CATTCACTCTTATATATCTTGTTGCAGTTATGGTTGGCTCTGGTTATTGCTGCAAACAACACTGCGTGGTTAACCACTGC TGTTCTTGTAACCAACATGAGAAACTTCCCTGTTAGTAGAGGCAAAGTTTCAGGAATCCTGAAAGGTTATGGGGGGCTCA GCGCTGCAGTTTTTACTGAAATTTACAGCATCGTGCTTCATAATGATTCTCCTAACTTCCTGTTGTTGCTTGCCGTTGGT ATTCCTGTTATTTGCTTAAGTATGATGTTTCTTGTTAGGGCTTGTACTCCAGCTTCTGATGAAGACTCTGTAGCTAGTGG CCAATTTATATTTATCCAAGTTTCTAGCGTGGTCTTGGGGTTGTATCTTCTAGCAACCACAATATTTGGCAATGCTCTTC AATTAAGTGACACTGTTTCCTCTATTTTGGTGGCTGTAATGATTCTTCTTCTCATGGCTCCAATTTCTGTCCCCCTGAAG ATGACTCTGTTTCCTAAGAAAGCTAGTACTGACTCATCTGAGCAACTACTTGGATCTTCTGAGTCTCTTAGTCGAGACAA AGATGACAAAACAGAACCACTGCTAGCATCTTCATCAGCAGGAGCCCTTGGAAGTTTTAATGATGAGGATGATTCATCTG AGGTAGCTATGCTTCTTGCTATAGGTGAGGGAGCAGTAAAGCAGAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAG TTCACCGAGGCTGTAGTAAAGGCTGATTTCTGGCTTCTATTTTTTGTTTATTTTGTTGGTGTTGGCACTGGGGTCACTGT TCTCAATAATCTAGCTCAAATAGGTATTGCACAAGGCGAGGAAGATACCACTATATTACTGTCAATTTTCAGTTTTTGCA ATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGTTAGTGACATCTATGATCTAATTATGCTTA GTAAATTTGAGATTTGAGATACATTCTTAAGCTCCAATCAATTTCAATCTAAGAGATCAGGGAGATTGATATTAAATCTG TTGACAATCACACAATCATGCCTATGAGAACATGGCTTTACAGCATTGCATGAAGTTAATAGAAGAATGAACTTTTCATG TTACTGAAACTTGTTACTGAGGCCGTTTTTAGAACTATGGTTAAACTTTTGAACTCACATTGAACTGGTTGCTAAACCAC ACTACTGTTTAGGTTGTCATGTAATTCCAGCTTTTGACAATTTTCAGGACAAAAACACTCCCAAGGACAGCCTGGTTGAC ATGCACACAAATAGTTATGCTCATCATGTATGTTCTGTTTGCCTTTGCTGTCAAAGGAGCCCTTTATCCTGCAGTTGCAT TCCTTGGTATCTGCTATGGTGTGCAAGTTTCTGTGATGATCCCCACCGTTTCCGAGCTTTTTGGTTTGAAGCACTTTGGT GTGTTGGGCAGCGTCATGTCCATCGGTAATCCACTTGGTGCGTTCCTTTTCTCAGCTCTGCTAGCAGGTTATATATATGA TAGTGAGGCTGCAAAGCAGCATGGTATTAACCTTATAGCTTCTGGTGCTGCCTGCGTGGGTGCAAACTGCTTTAAGCTGA CCTTTTTGATTCTTGCTGGTGTTTGTGGCGCTGGCATCATCTTGAGCATTATTCTGACACTGAGAATTAAGCCAGTTTAC CAGATGCTTTATGCCGGAGGTTCTTTCAAGCTGCCTCAAAGATCTTGAAGTCACTAAAACAGTAATGAAGTTGAACATTG AATAAAACAGAGCAGAGCTTAGGTCTATGGTATCTGCCATTACTGCGGTATTATATATACATGGGTCAGCATCAATGAAC CCCCTGTGTAATCTTTGAAGCTCAAAATTTTGGCATCTTGCATGGATAGTCTTTTTTTGCATATGTAAGTTAGTCTTAAA GAGGGTATTGGCTATTGAGAAGTGAGATCAGGTAAATGATCTGTATTATATGATCTGTATTATTAGAGGCTATCAGATAC TTCGACATTCACATATTTGAATATGGCTATTATCAATGAGATCCATGTATGTGTGTATTAGCTATTTATTTAGTCTAATT TGAAATTTTAAACTTAATTTTAGCCGATACTATGCATGAAAATATGAACTAATATTATTTGATATTTTTTTTGTTACTGA TAAGTGATAAGCACACTAAAACCCTGAGTTGTTGTCGATTGTGCTACATGTATTATTGACTTAAATCTTTGAAATTTTCC AATTTGATCATATTATTATATGATCTGTCATACTTCTTTTCCCCAGACTGTAAATGTCCAGAAACAACCTAAGCATAAAA AGATAGTTTATGAAAATCATAATTAA
CDS sequence (LotjaGi6g1v0209400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGACACTGAAGGGAGGAAGCAGGCCACCGTGGGTAGGTCTAGGAGCAGCGGTGTGGGTTCAGATTGCTTCCGGCAA CACCTTCACTTTCGCTCTCTACTCTCACTCTCTCAAATCCGTTCTCGGTTTCAACCAGCGCCAGCTCTCTCTCCTCGGCG TCGCCAACGATCTCGGCGAGAATTTTGGCATCCTCCCTGGTCTCGCCTGCAACAAGTTCCCGCCCTGGCTCCTCCTCTGT GTCGGTTCTCTTACCTCTTTCCTCGGTTATGGTGTTCTCTACCTCGCTCTCACCAAAACCGTTTCCATCCCTTACTTCGT GTTATGGTTGGCTCTGGTTATTGCTGCAAACAACACTGCGTGGTTAACCACTGCTGTTCTTGTAACCAACATGAGAAACT TCCCTGTTAGTAGAGGCAAAGTTTCAGGAATCCTGAAAGGTTATGGGGGGCTCAGCGCTGCAGTTTTTACTGAAATTTAC AGCATCGTGCTTCATAATGATTCTCCTAACTTCCTGTTGTTGCTTGCCGTTGGTATTCCTGTTATTTGCTTAAGTATGAT GTTTCTTGTTAGGGCTTGTACTCCAGCTTCTGATGAAGACTCTGTAGCTAGTGGCCAATTTATATTTATCCAAGTTTCTA GCGTGGTCTTGGGGTTGTATCTTCTAGCAACCACAATATTTGGCAATGCTCTTCAATTAAGTGACACTGTTTCCTCTATT TTGGTGGCTGTAATGATTCTTCTTCTCATGGCTCCAATTTCTGTCCCCCTGAAGATGACTCTGTTTCCTAAGAAAGCTAG TACTGACTCATCTGAGCAACTACTTGGATCTTCTGAGTCTCTTAGTCGAGACAAAGATGACAAAACAGAACCACTGCTAG CATCTTCATCAGCAGGAGCCCTTGGAAGTTTTAATGATGAGGATGATTCATCTGAGGTAGCTATGCTTCTTGCTATAGGT GAGGGAGCAGTAAAGCAGAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTCACCGAGGCTGTAGTAAAGGCTGA TTTCTGGCTTCTATTTTTTGTTTATTTTGTTGGTGTTGGCACTGGGGTCACTGTTCTCAATAATCTAGCTCAAATAGGTA TTGCACAAGGCGAGGAAGATACCACTATATTACTGTCAATTTTCAGTTTTTGCAATTTTGTGGGTCGGCTTGGTGGAGGA GTTGTTTCAGAACATTTTGTCAGGACAAAAACACTCCCAAGGACAGCCTGGTTGACATGCACACAAATAGTTATGCTCAT CATGTATGTTCTGTTTGCCTTTGCTGTCAAAGGAGCCCTTTATCCTGCAGTTGCATTCCTTGGTATCTGCTATGGTGTGC AAGTTTCTGTGATGATCCCCACCGTTTCCGAGCTTTTTGGTTTGAAGCACTTTGGTGTGTTGGGCAGCGTCATGTCCATC GGTAATCCACTTGGTGCGTTCCTTTTCTCAGCTCTGCTAGCAGGTTATATATATGATAGTGAGGCTGCAAAGCAGCATGG TATTAACCTTATAGCTTCTGGTGCTGCCTGCGTGGGTGCAAACTGCTTTAAGCTGACCTTTTTGATTCTTGCTGGTGTTT GTGGCGCTGGCATCATCTTGAGCATTATTCTGACACTGAGAATTAAGCCAGTTTACCAGATGCTTTATGCCGGAGGTTCT TTCAAGCTGCCTCAAAGATCTTGA
Protein sequence (LotjaGi6g1v0209400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFALYSHSLKSVLGFNQRQLSLLGVANDLGENFGILPGLACNKFPPWLLLC VGSLTSFLGYGVLYLALTKTVSIPYFVLWLALVIAANNTAWLTTAVLVTNMRNFPVSRGKVSGILKGYGGLSAAVFTEIY SIVLHNDSPNFLLLLAVGIPVICLSMMFLVRACTPASDEDSVASGQFIFIQVSSVVLGLYLLATTIFGNALQLSDTVSSI LVAVMILLLMAPISVPLKMTLFPKKASTDSSEQLLGSSESLSRDKDDKTEPLLASSSAGALGSFNDEDDSSEVAMLLAIG EGAVKQKKRRPKRGEDFKFTEAVVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTILLSIFSFCNFVGRLGGG VVSEHFVRTKTLPRTAWLTCTQIVMLIMYVLFAFAVKGALYPAVAFLGICYGVQVSVMIPTVSELFGLKHFGVLGSVMSI GNPLGAFLFSALLAGYIYDSEAAKQHGINLIASGAACVGANCFKLTFLILAGVCGAGIILSIILTLRIKPVYQMLYAGGS FKLPQRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 566 | 566 | 0.0 | – | |
| PANTHER | 1 | 566 | 566 | 0.0 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| CDD | 10 | 538 | 529 | 6.82949E-102 | – | |
| Gene3D | 11 | 200 | 190 | 2.1E-5 | – | |
| SUPERFAMILY | 11 | 191 | 181 | 1.11E-7 | ||
| Pfam | 11 | 257 | 247 | 2.2E-82 | ||
| Phobius | 12 | 34 | 23 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 35 | 75 | 41 | - | – | |
| Phobius | 76 | 97 | 22 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 98 | 102 | 5 | - | – | |
| Phobius | 103 | 128 | 26 | - | – | |
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 129 | 147 | 19 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Phobius | 148 | 165 | 18 | - | – | |
| Phobius | 166 | 170 | 5 | - | – | |
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 171 | 190 | 20 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| Phobius | 202 | 227 | 26 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 228 | 238 | 11 | - | – | |
| TMHMM | 237 | 256 | 20 | - | – | |
| Phobius | 239 | 257 | 19 | - | – | |
| SUPERFAMILY | 250 | 550 | 301 | 1.28E-16 | ||
| Phobius | 258 | 347 | 90 | - | – | |
| Gene3D | 342 | 549 | 208 | 6.2E-13 | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 348 | 370 | 23 | - | – | |
| Phobius | 371 | 381 | 11 | - | – | |
| Phobius | 382 | 403 | 22 | - | – | |
| TMHMM | 383 | 400 | 18 | - | – | |
| Phobius | 404 | 414 | 11 | - | – | |
| Phobius | 415 | 434 | 20 | - | – | |
| TMHMM | 415 | 434 | 20 | - | – | |
| Phobius | 435 | 439 | 5 | - | – | |
| TMHMM | 439 | 461 | 23 | - | – | |
| Phobius | 440 | 459 | 20 | - | – | |
| Phobius | 460 | 470 | 11 | - | – | |
| Phobius | 471 | 498 | 28 | - | – | |
| TMHMM | 476 | 498 | 23 | - | – | |
| Phobius | 499 | 524 | 26 | - | – | |
| Phobius | 525 | 546 | 22 | - | – | |
| TMHMM | 526 | 548 | 23 | - | – | |
| Phobius | 547 | 567 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0209400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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