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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0211800 |
| Transcript ID | LotjaGi6g1v0211800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|I1KQP0|I1KQP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0211800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50911039..50914258) extracted from Lotus japonicus Gifu genome v1.2.
CGTGGTTTGTTTTTGTCATCGTACAATCAAACAGGACAACAATAAACTTAGATCCTTGTGAGTCATAAATCATAAGTTTC AAAACCTGATACAATCATAGCAGAACAAAAAGTGGAAGTCACACGTCGAATAGTATAGGGAGAATATCATAAGGAAGACA AAAACTATGGGGGATTTTGCAGGAAATGCATGTTACAATGTATCCGTGATTCATCCCAATCGAATATGGCAAACTGCTAA TGTTGTAAAATCAGAGCTCAGTGTTCTCGCCTTTCAAATTTGCTTCACGGCATTCTTCTCTAGTCTGTTCTTCTATATTT GTAAACGCATCCTACAACCACGTCTACTTTCCCAAATCGCTGTAAGTAAAAACAAGTGTTTCAATTCCTCTGTAAAATGA TGAAATGTGATTGAAAATTAGTGTAATATTTTTAATTAAAAAACAAACAAACCTGGGAAATCTCCCGCTATGCGCCGAGG TATAGGAAAAGACCGTATCCACTTCGTGGATTTAATGTAGGTCTGCCTCAATTTATCAAGGGAATAAAGCCTTGGCGCAG CGGTAAGGTTGGGTTTGCAGTCAAATATTCGAGCCATGGAACAATTCTAAGAATTTCATAATAAATTAATAACAAATATG TTATTTGTTATTCTAACTTGAGGGTATTCCAAATTCAAATTTGCAGGTTGGCTTCATCCTAACGAAACCATTTATAGGGA GTTATGATTCTGTTTTTCAGTTCATTTATCCTGTAAATGGGGTCATAAACATTGAAGTACTAGGAAACATTGGATTGATA TTCTACTCATTCCTCAGTGGTTTGGAGATGAATTTGAATACCATTCTAAAAGCAAATAGTAAAGCAAAAAGCATTGCCAT TGCCGGGATCGTCTTTCCCATGGCGACGGCACCAGCTTTATATGCATGCACCGAAAAGTTTATATGGGACCTTCTTTCTA CAAACTTGAAGAAGACACAACTCATGCTTATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTT ACTGCCTTTCTGATCTCAAGCTCCTTCATACGGGTCTCGGCAAAAATGCTTTAACAGCAGCCATGATTAGTGATACTTAT GCATGGATTCTTTTCACATTAGCGGTTCCATTTTGTATTAATGCTAAAGGAGCAATTTACTCAGTGGTATGTACCATAAT ATTCATTGTATTTTGCATCTTTGTGCTACATCCTGTGTTTATAAGGTTCATTAATAGCAAGACCGAAAATGATGACTGGA ACAATGGCCAGCTAGTCTTTGTGGTGATGGGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACTCATGGGATT GTTGGGGCTTTTGTGTATGGACTCATTCTACCTCATGGCAAATTTTCTGACATGGTTATGTCAGTTTCAGATGATTTTGC TACTGGGTTTCTAGCACCAATCTACTTCGCTGGAGTTGGATTAAGACTCACATTACCATCTATTTTTGAGCAGCAAAATT GGCACTTGACATTGCTAGTTGTACTTTTGCTGTGTGTTCCAAAGATTTTAAGCACTATGTTCACTGGTTTCTTCTTCGGC ATGTGCAACCAAGAAGGTCTAGCCTTGGGCTTGATTATGAATACCAAGGGTGCCATGGCACTGATCATGCTAAATATTGC TTGGGATAGAGGGGTATTGATTTATTTTAGTCATACTATTTAATTTAGTACATGTTTGAAAACTGTCGTGAAGCCAAAAT CATGGTAAACAAAAGTAAAAGGAAATGGATTTTGGTTCACTTTTGTTTTTCCGAACGCGTTGCCAAACATGCACTTATTA AAATTCTTTAGTTTTGATTACTCAAACAATATCTATTGAAATGTGATATTGCAGATATTCTCTCCAGCAACCTACACTGT TATTACCTCTGTTGTTCTCCTAATGACTGCAGTGGTATCTCCAACTATTAATATCATCTACAAGCCTAGAAAGATATTTG GGCAGAACAATCTAAAGACAATACAAAAGCTAAGAGCTGATGCAGAGCTTCGAATTCTGACGTGTGTCCACAACACCCGC CAAGCCACCGGCATGATCAGCTTAATTAAATTATTTAATATCACAAGACTTTCTCCAATACAAGTTTTTACACTCTACCT TGTTGAATTCACCAAACGCGGTGCTGCGCTTGTTGCTGCTCACATGGAGAAGCCTAGAAGCCATAACAGAGTGCAAAACC TGACTGCAACACAGGTAGAGTTAGATAACATTACTAGTATCTTCGAAGAATTCAGAGAGGAACATGATGCTGCAAGAGTC CATACCTCAAGTGTCATGTCAAACTACGACACCATTCATGAGGATATACACATGACAGCAAATGAGAAACATACAAGCCT AATTCTCCTTCCATTCCACAAACAATTATCTTCAGAAGGGGTGTTAGAGACAACAAGTCTTCAATATAGAGATATAAACC AAATGGTAATGCATGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTTGTTCTAGGATCTTACCGAAAAAGGACTTC CACATTCTCATGCTTTTTATTGGTGGTCCTCATGATCGTGAAGCCTTGGCTGTTGCGCAGAGGATGGCGGGGAAGACAGA AGTCATGCTAACAGTGCTTCGATTCTTATTTCTTGATGAACTGGCAGAGGTGGATACAAAAAGTTACCCTGAAGCGCAAA GGTTGTTATCTTCTGTGATGGACATTGAGCAGCAGAAAGAGTTGGACGATGAGTATGTGAGTTCATTCAGACTCAAAACA GTGAATATGAGTGATAATTCTATATCCTACTCAGAGATCGGTGTGCATTCTATTACTGATATCAACACAGTCCTAAATGA GATAGAAAATAATGGCTGCGATTTATACATAATTGGACAAGGAAATTGTAAGAACTCTCGTGTGTTCTCGAATTTATTGG AGTGGTGTGATTTCCCAGAACTTGGAGTTATGGGGGATATTATTGCGTCAAAGAATTTTAGTTCACGTTCATCTATGCTG GTTGTGCAGCAGTATGGGTTTGGAGGAATGGTTTATGGAAAAGATGGGTTCAAGTCGCTTGAGGTGAGAACAGATCAATA ACGGTTGTTAAGGATTTAACATGTGTATACGATGAAAAAAGCTCGCTTTGTTTGCTTATTATGTTTCCTGAATTATTTAG CTTTTGCGTGAATTTATGAC
CDS sequence (LotjaGi6g1v0211800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACCGAAAAGTTTATATGGGACCTTCTTTCTACAAACTTGAAGAAGACACAACTCATGCTTATTTACTTTGGACTCT AGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTTACTGCCTTTCTGATCTCAAGCTCCTTCATACGGGTCTCGGCAAAA ATGCTTTAACAGCAGCCATGATTAGTGATACTTATGCATGGATTCTTTTCACATTAGCGGTTCCATTTTGTATTAATGCT AAAGGAGCAATTTACTCAGTGGTATGTACCATAATATTCATTGTATTTTGCATCTTTGTGCTACATCCTGTGTTTATAAG GTTCATTAATAGCAAGACCGAAAATGATGACTGGAACAATGGCCAGCTAGTCTTTGTGGTGATGGGGGTCTTAGCTTTTT CATACTTAACAGATCTTCTTGGAACTCATGGGATTGTTGGGGCTTTTGTGTATGGACTCATTCTACCTCATGGCAAATTT TCTGACATGGTTATGTCAGTTTCAGATGATTTTGCTACTGGGTTTCTAGCACCAATCTACTTCGCTGGAGTTGGATTAAG ACTCACATTACCATCTATTTTTGAGCAGCAAAATTGGCACTTGACATTGCTAGTTGTACTTTTGCTGTGTGTTCCAAAGA TTTTAAGCACTATGTTCACTGGTTTCTTCTTCGGCATGTGCAACCAAGAAGGTCTAGCCTTGGGCTTGATTATGAATACC AAGGGTGCCATGGCACTGATCATGCTAAATATTGCTTGGGATAGAGGGATATTCTCTCCAGCAACCTACACTGTTATTAC CTCTGTTGTTCTCCTAATGACTGCAGTGGTATCTCCAACTATTAATATCATCTACAAGCCTAGAAAGATATTTGGGCAGA ACAATCTAAAGACAATACAAAAGCTAAGAGCTGATGCAGAGCTTCGAATTCTGACGTGTGTCCACAACACCCGCCAAGCC ACCGGCATGATCAGCTTAATTAAATTATTTAATATCACAAGACTTTCTCCAATACAAGTTTTTACACTCTACCTTGTTGA ATTCACCAAACGCGGTGCTGCGCTTGTTGCTGCTCACATGGAGAAGCCTAGAAGCCATAACAGAGTGCAAAACCTGACTG CAACACAGGTAGAGTTAGATAACATTACTAGTATCTTCGAAGAATTCAGAGAGGAACATGATGCTGCAAGAGTCCATACC TCAAGTGTCATGTCAAACTACGACACCATTCATGAGGATATACACATGACAGCAAATGAGAAACATACAAGCCTAATTCT CCTTCCATTCCACAAACAATTATCTTCAGAAGGGGTGTTAGAGACAACAAGTCTTCAATATAGAGATATAAACCAAATGG TAATGCATGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTTGTTCTAGGATCTTACCGAAAAAGGACTTCCACATT CTCATGCTTTTTATTGGTGGTCCTCATGATCGTGAAGCCTTGGCTGTTGCGCAGAGGATGGCGGGGAAGACAGAAGTCAT GCTAACAGTGCTTCGATTCTTATTTCTTGATGAACTGGCAGAGGTGGATACAAAAAGTTACCCTGAAGCGCAAAGGTTGT TATCTTCTGTGATGGACATTGAGCAGCAGAAAGAGTTGGACGATGAGTATGTGAGTTCATTCAGACTCAAAACAGTGAAT ATGAGTGATAATTCTATATCCTACTCAGAGATCGGTGTGCATTCTATTACTGATATCAACACAGTCCTAAATGAGATAGA AAATAATGGCTGCGATTTATACATAATTGGACAAGGAAATTGTAAGAACTCTCGTGTGTTCTCGAATTTATTGGAGTGGT GTGATTTCCCAGAACTTGGAGTTATGGGGGATATTATTGCGTCAAAGAATTTTAGTTCACGTTCATCTATGCTGGTTGTG CAGCAGTATGGGTTTGGAGGAATGGTTTATGGAAAAGATGGGTTCAAGTCGCTTGAGGTGAGAACAGATCAATAA
Protein sequence (LotjaGi6g1v0211800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHRKVYMGPSFYKLEEDTTHAYLLWTLVITVTGFPVVAYCLSDLKLLHTGLGKNALTAAMISDTYAWILFTLAVPFCINA KGAIYSVVCTIIFIVFCIFVLHPVFIRFINSKTENDDWNNGQLVFVVMGVLAFSYLTDLLGTHGIVGAFVYGLILPHGKF SDMVMSVSDDFATGFLAPIYFAGVGLRLTLPSIFEQQNWHLTLLVVLLLCVPKILSTMFTGFFFGMCNQEGLALGLIMNT KGAMALIMLNIAWDRGIFSPATYTVITSVVLLMTAVVSPTINIIYKPRKIFGQNNLKTIQKLRADAELRILTCVHNTRQA TGMISLIKLFNITRLSPIQVFTLYLVEFTKRGAALVAAHMEKPRSHNRVQNLTATQVELDNITSIFEEFREEHDAARVHT SSVMSNYDTIHEDIHMTANEKHTSLILLPFHKQLSSEGVLETTSLQYRDINQMVMHDAPCSVGIFVDRCSRILPKKDFHI LMLFIGGPHDREALAVAQRMAGKTEVMLTVLRFLFLDELAEVDTKSYPEAQRLLSSVMDIEQQKELDDEYVSSFRLKTVN MSDNSISYSEIGVHSITDINTVLNEIENNGCDLYIIGQGNCKNSRVFSNLLEWCDFPELGVMGDIIASKNFSSRSSMLVV QQYGFGGMVYGKDGFKSLEVRTDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 650 | 650 | 0.0 | – | |
| PANTHER | 1 | 650 | 650 | 0.0 | – | |
| Gene3D | 7 | 289 | 283 | 4.6E-52 | ||
| Pfam | 20 | 284 | 265 | 3.5E-33 | ||
| Phobius | 20 | 42 | 23 | - | – | |
| TMHMM | 21 | 40 | 20 | - | – | |
| Phobius | 43 | 53 | 11 | - | – | |
| Phobius | 54 | 76 | 23 | - | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 77 | 81 | 5 | - | – | |
| Phobius | 82 | 102 | 21 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 103 | 122 | 20 | - | – | |
| TMHMM | 121 | 155 | 35 | - | – | |
| Phobius | 123 | 151 | 29 | - | – | |
| Phobius | 152 | 170 | 19 | - | – | |
| Phobius | 171 | 190 | 20 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| Phobius | 202 | 226 | 25 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 227 | 231 | 5 | - | – | |
| TMHMM | 231 | 253 | 23 | - | – | |
| Phobius | 232 | 253 | 22 | - | – | |
| Phobius | 254 | 264 | 11 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 265 | 285 | 21 | - | – | |
| Phobius | 286 | 664 | 379 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0211800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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