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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212100 |
| Transcript ID | LotjaGi6g1v0212100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inositol transporter; TAIR: AT1G30220.1 inositol transporter 2; Swiss-Prot: sp|Q9C757|INT2_ARATH Probable inositol transporter 2; TrEMBL-Plants: tr|G7IGM5|G7IGM5_MEDTR Inositol transporter 4; Found in the gene: LotjaGi6g1v0212100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50948354..50953827) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGGAGGAGTGCCAGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTAGCTCTATCATGGAAAAATCCTTATGTTCT TCGTCTTGCTTTCTCTGCTGGAATTGGAGGCTTTCTTTTTGGCTATGACACTGGTAATTAATTAAAATACTTCATAGTGC TCTGTTTTTTCTCTGTTTATAAATTCTTCTATATCATACATAACATACCTATTTCTTAATCAAAGCGATGAATGATTGGT GTGTGCACTGTGCAGGAGTCATATCTGGAGCTCTTTTGTATATAAGAGATGATTTCAAAGCTGTGGATAGAGAGACTTGG CTGCAGGTAATGTTCATCCATAAAGGCATTTTCAGTCATTTCTCTTGTTTCATGCCAAATTTGTTCTGTTTCAACTTTCA ATGGACCCCATTAATGCTCCTAATTTGCATTCACATGCATAACTATCACCTTGCACCAAAACAAAATTATCTAGAACAAG AATTTATTGATGATTTTCTCAAATTTTGAATCTATTTGGAAAACATATATAACCTGAATTTAGAATAGATTCACAAATAT AAATTCTCCAATATTTTATTTTATATTTCTTTTCAAATTACGTACTAATTTGCAATTGTTTATAAACAATTCAAATAACA CAAAGAGTTCAATAAGTGTGTTCATTTTTAAGATAAATAGGACAGGTTCAACTTTTCAGCTCAGATTCATGATTATCATA TCAAATTATCAGACATGTATTGTTAAATTAAAGTAAAAAAAAACCAACAAAGTTGAGGAAAACATATAAATAGTTGGACT CCTTAAATATTTAATTAGTCAAACGTTTTCATCTCTCTGGACAATGCGTATGTAAAATGATTTTCGTGAAAGACCTACCA ATTTAAATGTGATATTCAAATCTTAAGGGAATTAATCTAATAACTAACTGTCGGTTGTCTTTCGTAGTGATACTTGAATA GACAATAAACTGAAAAAAGCTAAGTATTAAATAAAACTAGAGATATGTTAACGAACTTTTTTCTATTTTTTTCTTAGATA AAAAAAAAGGATATGGTAACATTTACCTATAAGAAAAATATATAGTCAAAGAAATGAAAACAACAAATTAATATAATATA ATATTTTTGGGTAAATGTATTGACCTCATCTCAAAAAAATTTAATACAATAATGATAAATATTAAAGGATATCATTATTA TATCCCCAATTTTGTATTGTATTGAAAATAAAAAATAGTTAATAATACTGCAAAATATTTAATGAACTATAATCAATTAA CGAACTTAAAATATTTAATATCATATAAATATTTATATCTTTATCTTATGACATGATACATCGAAAATAATGTACTTTTT TTCCTTCATTAATTATTTTATCCCATGAAATTTTTACTAGTAAGGTTTTAATAAGACATGTTCTTAAAGTATTACTTAAA AAATGTGAGTGATATGTTTGTAATGTCCGAATAAAGACAACCTTTTCCCTAGTTTATGAGTGGGTGGTTCTCATTTCCCC TTTATTTGCTTTAAGAAAAAATGATAAGACAAATTTTCATTCATTTTTATTTTTCACTACTATTATGAGTTTGGGGAATT TTCGATTAAAAATCGTTCACAGAAGTGGTCCCGAAATTCTACACTGCCAAGTGCCAAGTGTTGGATCTCGATAGTTCTAA ATTTGGAGCACCAAGGACCACAATATTCTGTATCATTATCATGCTTCTTTTTAAAGCCTATGTTCTAAGCCTACATCATT CCATAGGAAATGCAATGTTTAAAGAGAAAAAAATTACAACTGATTTATGGCCTGAATTTCCTTATACACAACAAGCTACT TTACCTTTTTCTTAAGAAAAAAACTATAACTATGCATTGTTTGTTTACAAGCCGGTCAACCCGACTCACTCGAATTGATT CACCTCAAATTGAGGGTAAAAGTTGCTCAAGCCAACCCAACTTTTTTTTTGATGAGCTATAAAAAGTGTAACTGACTTGA CCTATTGCGGATTTGTGGATTGATTCATTAATTAAAAAAAATGAAAAAATGAAAAGTATGAATTTTTTTTATACAAATGG TTATTACAATTTAAAAACAAAACTAAAAAAAAGATAAAAATTACAATAATTTTTTTTTGTTAAAAAATTAAATTATAAGT TAATCTGGTCCTAACCCGCATAAGTTGGTGCTTGGTGGGTTAGGCGAGTTCACATAAAATAACCCGAGGTTCTTATGAGC CATATTTTTATCAACCAAATCCACCAATGACTTGGGTTGGCTAGCTTGTGGGTTGAAACTCATATTCACAACTCAATTTA AAATTATTCAATTAAAATTTATTTTATTACCTCATATCTAAATTAATTTAAAATTTAAAATATGATTAATCGTATTATAC AATTATTTACATTGTTAATATATGAGCTTAAAGCTTTAGTGAAGACTGAAGACTCTCTTCACTAAAAGTGTAAGCTAGTT TGCATGAACACACAAGCTCCAAACTTCATTACACAATATCTCTGGAAATTGTTAAGTAATAGATGCATCATGCATACAAT AATGCTGAACAACTATATTAGAAATAATAACATGAAGCGATTTATGTGACTCTTATCAGCAGCTTAAATATTTTAATAAT TTGTTATTTGATAAACTATTATGCTAATTGCACCAAAACACTAATTAAAACTTGATGTTAATCATGAAACAGGAAGCCAT AGTGAGCATGGCACTTGCTGGAGCAATCATAGGAGCCGCAGTTGGAGGATGGATTAACGACCGATTTGGAAGGAAAACAG CAATTCTCCTTGCAGACACACTCTTTTTCATTGGAGCGGTTGTGATGGCATCTGCTATGAATCCAGCTATTCTCATTGTT GGTAGAGTTTTTGTTGGACTTGGTGTTGGAATGGCTTCAATGGCATCCCCTTTGTACATCTCTGAAGCTTCTCCAACCAG AGTTCGTGGAGCACTTGTTAGTCTCAATGGATTTCTCATCACTGGAGGACAGTTCCTTTCCTATGTCATCAACTTGGCCT TCACAAGTGTAAGAAAACTAAACTTCACCTATTCAACATGTTTAGCTTTTTTAATAAATTACATATTGTGACACAAATCA CATGTTTAAAGTCAATTCTCATGATAAGCTTTTGTGAGTAGTATCTAGATACCAGAATTGATTCGAAGAAAAAGTAAGCT CATGTGCTATGTTAGTGAATAGTGATCATTGAAGGTCCTTTTGTCTATTTTAAAAAACATGTGTATGGATGAATCATTTC AAAATCTGCTAGATGATTAAGCTTCTTTCAACTATTAATTACTTTGCCTAGATAGTTTCCTGCACTAACTTAAGATGTCA TATTGAATAGAGTTCAGCAATTCTTATCCTTTTAATTAGAGTTATGCTTAACTTGAATAGATGTTGTACGGGCATGAGGG TGTGTATTAAGGTCTCATATTGACAATTAAAAAAAGGCATTATATAGGGTATTAGCAATCTTCACCACGAAGTTAGATTT TGGGGCAGGGTTAGGCTTAACTGGAATTTTAAGACTGACCAACATTTTGTAACTTTGATAAATTTTTGTTCAGGCACCAG GAACATGGAGGTGGATGTTAGGAGTTGCAGCAGTACCTGCTCTAACACAAATCATATTGATGCTTATGCTCCCAGAATCA CCTCGTTGGCTATTCAGAAAGGTCCCATCATCATCAGTCATCACCTTTTCAAACTACTCCAAGTAATCTAAATTTTCTTT TCAGAATCTGTATCTTTACATGTTCTTTCTTTTTGTCCATCATGTTAAACAACAGGGTAAAGAAGAACAGGCCAAAGAAA TTCTAAGGAAGATTTACCCTCCCCAAGAAGTTGAAGATGAAATCATTGCTTTAAAGGAATCAGTTGACATGGAACTCAGG GAAGCTTCAGATAAAGTCAGCATAGTCAACCTTTTGAAAACCAAAACTGTGAGGAGAGGTTTATATGCAGGAATGGGAAT TCAAATCTTCCAGCAGTTTGTGGGAATCAACACTGTGATGTACTACAGCCCCACCATTGTTCAATTAGCTGGCTTTGCAT CCAATAGGGTTGCACTTCTTCTATCACTTGTCATAGCTGGGTTGAATGCATTTGGTTCCATTTTGAGCATTTACTTCATT GATAAGACTGGGAGGAGGAAGCTTCTGCTGATAAGTTTGTCTGGTGTTGTGGTCTCCCTTGTTGTTTTAACTGTTGTGTT CCATCAGACTACAACTCACACTCCAATGATCAGCTCCATTGAAACTTCTCACTTCAATAACACATGCCCTGATTATAGGG CAGCTTTGAACCCTGGTGAATGGGATTGCATGCAATGCCTAAAGTCTTCTCCTGAGTGTGGCTTTTGTGCTTCAGCAGAT AATAAGGTAAACATGTCCTCCTCACACCCTTCATATTGAGTACATCAAAAGGTTTCCTCATTACCATATTTCATATACCT TGGTACTGGTATGAATCCATGTGTGTTTGACTCCAGTTGGGAACCTCAGAATCATATTTGATAGAGTAAAATTAATTTTT GATAAGTGCATGAGTGGCGGTATGAAACATGGTGAGGTCAAAATTACAATCCACAATCACAAAATTAAGGAAAATTGATT AAGTCCACCGTGATTTTGGCTTGATCATGGTTTTCCACGGTGTATCACAACATGCACTCAGTAAATGTTAGAGAGTTATT TTAGAAAATTGATTTCACTTCCAAAACTAAACCTGCGAGAAGCTACAGGGTCTAGTTTCTGCGTGAACATAATCAATTGT GAGGTTTTATAACTGAATTTCACAATGATGCAAATGCGCACTTCATTTAGTTATAGTATTATGGATTTATGGTACAAAAC AGCAAATCATTAATGCATCAACTAAATGAAAATGGTTATCATCTTTTTTTTCTTCATTGTTTTAATTAACTTCTAACACT ACTTCCAATTACTCTGCAGCTATTACCTGGGGCATGCTTGATTTCCAATGACACAACAGAAGATCAGTGCCACAATGAAC ACAGGCTATGGTACACAAGGGGATGCCCTAGCAAAAATGGATGGCTTGCACTAATTGGCTTGGGACTTTACATCTTATTC TTCTCACCAGGAATGGGAACTGTTCCATGGGTTATAAACTCTGAGATATATCCTTTGAGATACAGAGGAATCTGTGGAGG AATGGCATCTACCTCAAATTGGGTTTCAAATCTCATTGTTGCACAGTCCTTTCTGTCCTTGACAGAAGCTATAGGGATTT CATCCACATTCATGATATTTATATTCATCACCGTCGCGGCGATCGTCTTTGTGATTGTTTTCGTGCCAGAAACCAAAGGA CTTCCAATTGAGGAGGTAGAGAACATGCTTGAAAGAAGGTCTCTGAACTTCAAGTTTTGGCAAAGAAGTTCTGGCTCTGG TCAAGTAGATGCACAAAAGACTATCTCACTTTGA
CDS sequence (LotjaGi6g1v0212100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGAGGAGTGCCAGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTAGCTCTATCATGGAAAAATCCTTATGTTCT TCGTCTTGCTTTCTCTGCTGGAATTGGAGGCTTTCTTTTTGGCTATGACACTGGAGTCATATCTGGAGCTCTTTTGTATA TAAGAGATGATTTCAAAGCTGTGGATAGAGAGACTTGGCTGCAGGCACCAGGAACATGGAGGTGGATGTTAGGAGTTGCA GCAGTACCTGCTCTAACACAAATCATATTGATGCTTATGCTCCCAGAATCACCTCGTTGGCTATTCAGAAAGGGTAAAGA AGAACAGGCCAAAGAAATTCTAAGGAAGATTTACCCTCCCCAAGAAGTTGAAGATGAAATCATTGCTTTAAAGGAATCAG TTGACATGGAACTCAGGGAAGCTTCAGATAAAGTCAGCATAGTCAACCTTTTGAAAACCAAAACTGTGAGGAGAGGTTTA TATGCAGGAATGGGAATTCAAATCTTCCAGCAGTTTGTGGGAATCAACACTGTGATGTACTACAGCCCCACCATTGTTCA ATTAGCTGGCTTTGCATCCAATAGGGTTGCACTTCTTCTATCACTTGTCATAGCTGGGTTGAATGCATTTGGTTCCATTT TGAGCATTTACTTCATTGATAAGACTGGGAGGAGGAAGCTTCTGCTGATAAGTTTGTCTGGTGTTGTGGTCTCCCTTGTT GTTTTAACTGTTGTGTTCCATCAGACTACAACTCACACTCCAATGATCAGCTCCATTGAAACTTCTCACTTCAATAACAC ATGCCCTGATTATAGGGCAGCTTTGAACCCTGGTGAATGGGATTGCATGCAATGCCTAAAGTCTTCTCCTGAGTGTGGCT TTTGTGCTTCAGCAGATAATAAGCTATTACCTGGGGCATGCTTGATTTCCAATGACACAACAGAAGATCAGTGCCACAAT GAACACAGGCTATGGTACACAAGGGGATGCCCTAGCAAAAATGGATGGCTTGCACTAATTGGCTTGGGACTTTACATCTT ATTCTTCTCACCAGGAATGGGAACTGTTCCATGGGTTATAAACTCTGAGATATATCCTTTGAGATACAGAGGAATCTGTG GAGGAATGGCATCTACCTCAAATTGGGTTTCAAATCTCATTGTTGCACAGTCCTTTCTGTCCTTGACAGAAGCTATAGGG ATTTCATCCACATTCATGATATTTATATTCATCACCGTCGCGGCGATCGTCTTTGTGATTGTTTTCGTGCCAGAAACCAA AGGACTTCCAATTGAGGAGGTAGAGAACATGCTTGAAAGAAGGTCTCTGAACTTCAAGTTTTGGCAAAGAAGTTCTGGCT CTGGTCAAGTAGATGCACAAAAGACTATCTCACTTTGA
Protein sequence (LotjaGi6g1v0212100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGGVPEADVSAFRECLALSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKAVDRETWLQAPGTWRWMLGVA AVPALTQIILMLMLPESPRWLFRKGKEEQAKEILRKIYPPQEVEDEIIALKESVDMELREASDKVSIVNLLKTKTVRRGL YAGMGIQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVIAGLNAFGSILSIYFIDKTGRRKLLLISLSGVVVSLV VLTVVFHQTTTHTPMISSIETSHFNNTCPDYRAALNPGEWDCMQCLKSSPECGFCASADNKLLPGACLISNDTTEDQCHN EHRLWYTRGCPSKNGWLALIGLGLYILFFSPGMGTVPWVINSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTEAIG ISSTFMIFIFITVAAIVFVIVFVPETKGLPIEEVENMLERRSLNFKFWQRSSGSGQVDAQKTISL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 427 | 427 | 22.501 | ||
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 5 | 68 | 64 | 4.1E-195 | – | |
| PANTHER | 5 | 68 | 64 | 4.1E-195 | – | |
| Gene3D | 19 | 64 | 46 | 1.2E-5 | – | |
| Phobius | 29 | 53 | 25 | - | – | |
| TMHMM | 30 | 52 | 23 | - | – | |
| CDD | 32 | 425 | 394 | 1.45698E-89 | – | |
| PRINTS | 34 | 53 | 20 | 2.1E-10 | ||
| SUPERFAMILY | 36 | 436 | 401 | 1.47E-37 | ||
| Phobius | 54 | 72 | 19 | - | – | |
| Gene3D | 65 | 264 | 200 | 1.3E-53 | – | |
| PANTHER | 69 | 448 | 380 | 4.1E-195 | – | |
| PANTHER | 69 | 448 | 380 | 4.1E-195 | – | |
| Pfam | 71 | 252 | 182 | 5.9E-49 | ||
| TMHMM | 72 | 94 | 23 | - | – | |
| CDD | 72 | 152 | 81 | 7.80954E-5 | – | |
| Phobius | 73 | 94 | 22 | - | – | |
| Phobius | 95 | 159 | 65 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 160 | 181 | 22 | - | – | |
| PRINTS | 170 | 180 | 11 | 2.1E-10 | ||
| Phobius | 182 | 195 | 14 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 196 | 220 | 25 | - | – | |
| Phobius | 221 | 226 | 6 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 227 | 246 | 20 | - | – | |
| Phobius | 247 | 335 | 89 | - | – | |
| Gene3D | 292 | 442 | 151 | 1.5E-31 | – | |
| Pfam | 332 | 437 | 106 | 1.5E-24 | ||
| Phobius | 336 | 360 | 25 | - | – | |
| TMHMM | 338 | 360 | 23 | - | – | |
| PRINTS | 339 | 360 | 22 | 2.1E-10 | ||
| Phobius | 361 | 371 | 11 | - | – | |
| PRINTS | 362 | 374 | 13 | 2.1E-10 | ||
| TMHMM | 367 | 389 | 23 | - | – | |
| Phobius | 372 | 393 | 22 | - | – | |
| Phobius | 394 | 398 | 5 | - | – | |
| Phobius | 399 | 423 | 25 | - | – | |
| TMHMM | 399 | 421 | 23 | - | – | |
| Phobius | 424 | 465 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0212100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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