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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212400 |
| Transcript ID | LotjaGi6g1v0212400.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT1G30220.1 inositol transporter 2; Swiss-Prot: sp|Q9C757|INT2_ARATH Probable inositol transporter 2; TrEMBL-Plants: tr|A0A151SI54|A0A151SI54_CAJCA Putative inositol transporter 2; Found in the gene: LotjaGi6g1v0212400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51012850..51019915) extracted from Lotus japonicus Gifu genome v1.2.
TCCTCCAGAATATTAGTGTGTCCAGAGTCCAGACTCATCATCTCAACGGTTCCCCCCATTATAAATACACTACTCATCTT GATCCTCCATTACTCCATCCACAACACTTGCTCTCAATTCTCAATCAAGCAAGGACACAACACAAAACTAACGTTGTTGA AGAATCCTAGTATAGCACTCTTGTTCTGTTCTTCCTCTGTTTCTCTGTTCTGTTTTTCAACACCATGGAAGGAGGTGTAC CAGAAGCTGACATGTCTGCTTTCAGAGAATGTTTATCTCTTTCATGGAAAAACCCTTATGTTCTTCGCCTTGCTTTCTCT GCTGGAATCGGTGGCCTCCTCTTTGGCTACGATACCGGTTAGTTTAATTTCTAACTAACTAACTAACCAACAAAATCCCC TGTTACATTTATTCCCCTGTTTCAAATCCTCTGTTTCATCATACATATCACATACCAAAATTACTCATCTACTCTAAAAA TCAAAATTATCATGTTAATTCTAACTTCTAAGTGTAATTTTCATCTGGGTCATGCTACAAATTTAAATTAAATAAATATA TAGGATAAAGTTTCATTTTATGTTTTTTCTTAGCATGTGATGTATGCGCATATTATTGTTATGTGTGCTATGGTTGATAT GTAATTGGTGGGGTATCTGTATGTATCTGCAGGAGTTATATCTGGGGCTCTTCTGTATATCAGAGATGACTTCAAAGCAG TAGATAGAAAAACTTGGCTTCAGGTAATCTCTCTCTCGCTCTCTCTTGAAAATTGAGATAATTCATTAATGAATGATCTT ACTCTCCCAATCAACTCAAATCACCTCTTGTGAACCCCAACCTACTTGAATGGACATTAATGCCCCCCTCACCTCCTCTG TTCACAACCACCAACTTGCTGTAAAAAAGGACAAAACTTGGCATCGTTTTCTATGTTACATGTTCTTTGGACATATTGTC TGTACCCTTTTTTGTGAAGAAAAAATGTATTGAAATGTGTATTATTTTTCCATTTTTCATATTTTTTTGACTAGTAAACA AAGAGGTTTTAGTCTAATTTCTTGCTGAAAAATCAACACACTTCTTAAGATAAACTCAATTATTTCCTTTTTCTTTACAT GATTTCTTCATAATTTGACTAGCAGCTTGAGAAATGCTGACTCTGTTTTATTTTTTTGGTAGTACATAAAATACTGACTC TATTTCTCAGGTGATAATTGTTTTTTTTTTTTAATTGCAAAGTTTCATGATATATATCATAGTAGATTTGTATTAAGGTT GTGTTTTTTAATTTGAGTTCACAGATTTTCAAATCGGTTTCGGCGGATAAAAAAACTACAGGATCCGGATTCACCGGATG AGATCCATTAAATATTTTGGTTTGGATATATTCACATATTTATTTATTTTTTAATACAAAATATTAAATACATTTTTAAA GTAATAAAAATATTAAATACGTGAACCCAGAGTTGTTTTTTCTTCCCACGGTGTCTTTAGAGATAAAAAAATGTTAATCT CCTTGACTTACACGCTGAATATCTGCCTGATAAATTCAAAGAAAAGAGTTAAGGATGCTGAAAACGATATATATCTAATT ACTTTTTTTGGTACACGATATAAATCTAATTACTACTATCAAAATATAGATATAGATATAGATATTTTTTTTTGGTATCT AGGTATCAGTAGGATTTGAACCTAGGATTTGAGAAATTTTAATCGATCAAGTACCATTTAGGCTATTAATACTAGTAATA TAGATATAGATATAAGCATAAGTAAATTTGTTTTGGTTACAAATAAGCATAAGTAGTTGAAATTACCTGTCTTTTGTGGA TTTTCATTTTTAGTTAAAATTGAAACGTTAACAATACATTTTTCCTTCAAAAGTAATAATACTTTATCTCAATTACTACT TTTAATGTGCTATTTACAATGAAGTTAAGAAAGAAAAAAGATGAGGAACATGTGATTTGGTTTCAAAATAAATGTCTGTG GTCTAATAGAAACATGCCACATATGAACCCAAAAAAATGGAAAATAAGTGTCCTAATCATGTCATGCTTGAGCAAGTGCT TGATTTGCCCAATAGGGGGAGGTTGCCCACTTACCCAACAAGGCAAATTGAACACCAGCTAGCTACTAAACCATTCAAAA CCAGGCAATTCCTATTATGTTCTTAACCATCCTCAATCGTCAAATCAAATAATTAAACAAAAAAATAGATGGGACGTTTT AATTTTAATATGATTCTACCATACAATAACAGCTCATGCTACATCCAAATCCAATTCAGATTTGGTTAGTTAAAAAAGGA AGTATGCCTTTAACATACACAAGTAAAAACTTGTGTAACATTGCACAAGCTCCTTTTGACCTCTTATAGCAGGTTTTCCG GTTTTTTATTTTAAAAAAAATTCAAAATACTTATTTTATTAATCACAATATTTATGCTAATCTTTCTCATTATCACCTTC ATCCTCTAACAAAACCCTAGCTGTCACCTCCTTCATCTCTCCCATGACCTCGCCGTCACACATTCATGGCCGTGCCGCCA CCACCACTCCTTCTTACTCCTGACCTCGTTTCCTTCGTTCTCAACCGCGCCACCGCCATGCTCTTCTGTGTTCAGCGCCG CCGCCACGCTCCTCCTCTGTTACTGTGACCGGCTCCGTCGCACGCTCCTCGCCGGTTCCAGCGCCGATCTCCCTCACGAG GTCCGATCCGCCGCTTTTTGGTTGTGAAGCTTCTCAGATCTGGTTTCCCTGCGGCGGTCTGCGGTTTGGATCCCGCGGTG GTTCTGGTGGACTGAGGGGAGCATGGAGGTTTACGAGATCTGGAAATGAAAAATCCAGATCTGTTTTTGCAGAGATTGAA GAACACCATGATGAAGATGAAGACAACGGTGAATCTCTTCAATTATAGTTGTGTGGTTCCTTTCTTATATGATTGTCATT GTGGGGTATTGTTGTTGGTGAGGGATCTGAGGAGGAAGAGGGCTTTTTTGTGACATGGGTGTTTATCATGCTCTGCAAGA TTATTGCATGTTTCTATGCTTTTGTTCACCTGTCCTGGATTTTAACTTGATTTGCTTGAGGTGGTTGGTATTTTTCAATA TATTAATGAAATCATGCCAATAATATAAGAAAGGAACCGCAAGAGGGAATGAAGAAGTTTCGTATGATGAATGAAAAAGT GGGATGACGAACATGATTTGAGGATGAAGATGAACTTAGATGTGATTAACCTAAATCCTTAATTAATTAATTCACTAATA AATATTTTTTTTGTTTTTGAATTATTTTTTAAAAAAAAATATTGAAAACCTGTTACCATGGGTCAAAAGGTGCTTGTGTA ACCTTACACAAGTTTTTACTTGTGCATATTAAAGATTTCCATATGTTTGATTTTTTTAAACAATGGTTAGAGTTTGAGAT GGAAAAAAACTATGAAGTGGATATTCAGTTCCCATCTCAAATAACATATCAGAAAAAATCCAATCCAGATTTCCTTTTTT CACACTTCTATTTATTTTAATTTTGTTGATGATCAAACCAATTCTTTTTGCGATTATGTGTAACTCAATTGAGTTCATGA TTTGAATTTCATTCGAAAATTAGGGCGAAGCCAAAATCATGGCAGATAGAAGCAAAAGCTAAGGAAAATTTCTTTTATCT ACCATGATTTTGGCCTCATCATAGTTTTCGAATGAGTTTCCAAACATGCACGAAAGCTGTTAAATGGGATTCATCAAAAC CTAGAGTGCAGTCATGGAAATCATTCCTTATGCAATAGCTCTTGAGTCAATTTTCCTTTTCTAAATGAAAGAGCGAATAA AAAATGTATGATTCTTTCTTTTTGGATTGAAAGTACTTATTTTGGTGTATGTAATAGTGAATCAATCATGGAAAAATGTT TCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATCATAGGAGCTGCAGTTGGAGGATGGATCAATGACAGGTTTG GAAGGAGAGTAGCAATAATTATTGCAGATACCCTCTTTTTAATAGGGTCTGTAATCATGGCTGCTGCTCCAAATCCAGCT ATTCTCTTATTTGGTAGAGTTTTTGTTGGATTTGGTGTTGGCATGGCTTCAATGGCTTCCCCTTTGTACATTTCTGAGGC TTCCCCAACTAGAGTGAGAGGAGCACTTGTCAGTCTCAACAGTTTTCTTATAACTGGAGGACAGTTCCTTTCCTACCTCA TCAACTTGGCCTTCACTAATGTATGTACAATTCTCAAGTTTGAAACACTTGTTTATACAATGCTTGATAACTGTTTGTAG AAATGTCACACTTTTGTTTATTTTATACTATGTTACTTTAGATGCATGATAGATTGCTTTAAAAAAATGTGTTTTGTTTT TTCAAAATCCACATGAAAAGTATGTTCCAAAGAGAATGTTATTACTTATATCATTGTTATTTTTTTTTCGTCTGAATTTC ACACCTTTTGTTTGGTGATGATGAGCTAAAAGAATTTGCTGCTGGTTTTTGAATTTTCACTCAGGCACCAGGGACATGGA GATGGATGTTAGGGGTAGCAGCAGCACCTGCTATAATACAAATTGTGCTGATGTTGTCACTCCCTGAGTCTCCTCGTTGG CTGTACCGGAAGGTTAGTTCTTCGTCACTAGTTATAGTGTGTTCGGATCAGCTTCTCTTTTGTAAGAATCACTTTTGAAT TCAGAAGTTTCTCCCCATAATAGATTATGACTTCAGAATCAATTGTAAAAGGGTTTCCAACTAGTCATCAAGCATCACCA AATTTTCAGTCAATGAAATTCCAAAAGTCTTCACTGTTGTTCCTATTTTGATTTTCATGTTTTTTCTTTCCCAATTTGAA ACAGGGTAGGGAGGAAGAATCAAAATCAATTCTGAAGAAGATTTACGCTCCAGAGGATGTTGACGCTGAAATTGAAGCGT TAAAGGAATCAGTTGAATCTGAAATTGAGGAATCAAAAACATCAAAGATAAGCATGATGACACTTTTGAAAACCACAACT GTTAGAAGAGGTCTTTATGCAGGGATGGGACTCCAATTCTTCCAGCAGTTTGTGGGAATCAACACTGTAATGTACTACAG TCCCACCATTGTTCAACTTGCTGGTTTTGCATCTAACAGGACAGCCCTGCTTCTGTCACTAATCACCTCTGGCCTAAATG CTTTTGGTTCCATTTTGAGCATATATTTCATTGACAAGACTGGCAGAAAAAAACTTGCCCTGATCAGTTTATGTGGTGTT GTGCTTTCCCTGGCTCTTCTTACTGTCGCTTTTCGTGAGAGTGAGCTTCATGCTCCAACAGTTAGTGCCATTGAAACCTC TCATTACAATAACACATGCCCTGATTTCAGAGCAGCTGTGAACCCTGGTAGATGGACTTGCATGACTTGCCTAAAGGCTT CACCATCTTGTGGTTTTTGTGCTGCTTCTCCTAACAAGGTAAATCTATTCTACACTCACATTTTACCAAAACCATACAAT ATTGCAAGAGTATATCTATAACATATTCATATTTTGTCATGAACAAATTATCAGAAAAGATTGGGTAAAAGATGCGTGAA TGATTTTATATTATGTTTCTAAAACAAACCCTCACGTATGAGCTAATTAGGCTTTAAGCGCGAACAATGCACGGATTTGA ATTTAGTGCAGTTGACTGCGGTCACAAATACAAGTCTTATGATTAAAGATTAGATGGGTCATATTTTTAGCATATGTTTG TACTTTATTTACTAAGATCAAATCTGAAACGTTCGATCTTAATCCAATGACTAACATTCAATGGTTGCCCTAAATGCGTC AAAAAGGACTGCAGGCACTGAAGTTTAACTTTTTTGTCAGAATAATTGGAGAAAACAATGATTGAAGTCTAGACTATTTG GTCATAGAGATTCTGATAGCATATCATGAACCAATATCTCAAAATCTAAAGCTGTTGAATATATGACATGTGAATGATTT TATATTATATTTTCTAACATATTTATTGACATTACTATAAATGAAATTTGCAGCTCTTACCTGGGGCATGTTTGATTTCC GATGACACTACAAAGGATATGTGTGGAAATGATCACAGGGCATGGTACACTAGGGGATGTCCAAGTAAATTTGGTTGGGC TGCTCTAGTTGGGCTTGCTCTCTACATCATTACCTTCTCACCAGGGATGGGGACAGTTCCATGGGTTATCAACTCTGAGA TCTATCCCTTGAGGTATAGAGGGGTTTGTGGAGGAATTGCATCCACCACTGTTTGGATTTCCAACTTAATTGTTTCACAG TCTTTTCTGTCCTTGACACAAACTATTGGGACAGCATGGACATTCATGATGTTTGGAATTTTGGCTGTTGTAGCCATTTT CTTTGTCATTGTTTTTGTGCCTGAGACCAAAGGGGTTCCAATGGAGGAAGTGGAGAAGATGCTGGAACAAAGATCTCTGC AGTTCAAGTTTTGGCAGAAGAGAGATTCTGGCTCTGAGAAGCACTAACTCAGGAAAAAAATTACTGAGTTGAATTTTATG ATTAGTTTTATGTAGCTTTAAATAGTGAAGCATGTGTCTGGTGTATTTGGCAATGGTTTTCCTTGGTGTAAGGTTTGCTG GTAGTTTAGCATTTTAATTAGGTGAAATGTGTAGTTAATTAGTTGGATTGCTGAAAATCCTTATCAAATCCATAAAGGAT TGAATTGATAATACTCTTCACTAAAGAAATAATAAAATGTATTGACTATTAAGTGAGTTTTATTGTTCTTATTTTTTCCT CTTTTGCCCTGGAACTGCAATATGTCAACATCATTAAGTGTATATTTTCCTTCTCAAATGCAATTTGTGAATTGGATCCA CAACCCACTGAAGCATGGCCGAACAAACAATCACATCAGTTGGCCCATTATATAACCCCAAAGCAACCTTTTCACACTCT CCATTTTCTTTGACAAAATAAAATGTTCTCTTATTTTCCAGCCAAACAAATTATATTCATCAAATAAAGTTGGAAATTAT TACACATATCATACCTCAGAAGTGGC
CDS sequence (LotjaGi6g1v0212400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAATCCAGATCTGTTTTTGCAGAGATTGAAGAACACCATGATGAAGATGAAGACAACGGAAGCCATAGTGAGTAC AGCAATTGCTGGAGCAATCATAGGAGCTGCAGTTGGAGGATGGATCAATGACAGGTTTGGAAGGAGAGTAGCAATAATTA TTGCAGATACCCTCTTTTTAATAGGGTCTGTAATCATGGCTGCTGCTCCAAATCCAGCTATTCTCTTATTTGGTAGAGTT TTTGTTGGATTTGGTGTTGGCATGGCTTCAATGGCTTCCCCTTTGTACATTTCTGAGGCTTCCCCAACTAGAGTGAGAGG AGCACTTGTCAGTCTCAACAGTTTTCTTATAACTGGAGGACAGTTCCTTTCCTACCTCATCAACTTGGCCTTCACTAATG CACCAGGGACATGGAGATGGATGTTAGGGGTAGCAGCAGCACCTGCTATAATACAAATTGTGCTGATGTTGTCACTCCCT GAGTCTCCTCGTTGGCTGTACCGGAAGGGTAGGGAGGAAGAATCAAAATCAATTCTGAAGAAGATTTACGCTCCAGAGGA TGTTGACGCTGAAATTGAAGCGTTAAAGGAATCAGTTGAATCTGAAATTGAGGAATCAAAAACATCAAAGATAAGCATGA TGACACTTTTGAAAACCACAACTGTTAGAAGAGGTCTTTATGCAGGGATGGGACTCCAATTCTTCCAGCAGTTTGTGGGA ATCAACACTGTAATGTACTACAGTCCCACCATTGTTCAACTTGCTGGTTTTGCATCTAACAGGACAGCCCTGCTTCTGTC ACTAATCACCTCTGGCCTAAATGCTTTTGGTTCCATTTTGAGCATATATTTCATTGACAAGACTGGCAGAAAAAAACTTG CCCTGATCAGTTTATGTGGTGTTGTGCTTTCCCTGGCTCTTCTTACTGTCGCTTTTCGTGAGAGTGAGCTTCATGCTCCA ACAGTTAGTGCCATTGAAACCTCTCATTACAATAACACATGCCCTGATTTCAGAGCAGCTGTGAACCCTGGTAGATGGAC TTGCATGACTTGCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCTTCTCCTAACAAGCTCTTACCTGGGGCATGTT TGATTTCCGATGACACTACAAAGGATATGTGTGGAAATGATCACAGGGCATGGTACACTAGGGGATGTCCAAGTAAATTT GGTTGGGCTGCTCTAGTTGGGCTTGCTCTCTACATCATTACCTTCTCACCAGGGATGGGGACAGTTCCATGGGTTATCAA CTCTGAGATCTATCCCTTGAGGTATAGAGGGGTTTGTGGAGGAATTGCATCCACCACTGTTTGGATTTCCAACTTAATTG TTTCACAGTCTTTTCTGTCCTTGACACAAACTATTGGGACAGCATGGACATTCATGATGTTTGGAATTTTGGCTGTTGTA GCCATTTTCTTTGTCATTGTTTTTGTGCCTGAGACCAAAGGGGTTCCAATGGAGGAAGTGGAGAAGATGCTGGAACAAAG ATCTCTGCAGTTCAAGTTTTGGCAGAAGAGAGATTCTGGCTCTGAGAAGCACTAA
Protein sequence (LotjaGi6g1v0212400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNPDLFLQRLKNTMMKMKTTEAIVSTAIAGAIIGAAVGGWINDRFGRRVAIIIADTLFLIGSVIMAAAPNPAILLFGRV FVGFGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTNAPGTWRWMLGVAAAPAIIQIVLMLSLP ESPRWLYRKGREEESKSILKKIYAPEDVDAEIEALKESVESEIEESKTSKISMMTLLKTTTVRRGLYAGMGLQFFQQFVG INTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLCGVVLSLALLTVAFRESELHAP TVSAIETSHYNNTCPDFRAAVNPGRWTCMTCLKASPSCGFCAASPNKLLPGACLISDDTTKDMCGNDHRAWYTRGCPSKF GWAALVGLALYIITFSPGMGTVPWVINSEIYPLRYRGVCGGIASTTVWISNLIVSQSFLSLTQTIGTAWTFMMFGILAVV AIFFVIVFVPETKGVPMEEVEKMLEQRSLQFKFWQKRDSGSEKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| ProSiteProfiles | 1 | 493 | 493 | 48.66 | ||
| PANTHER | 16 | 514 | 499 | 1.5E-256 | – | |
| PANTHER | 16 | 514 | 499 | 1.5E-256 | – | |
| Pfam | 19 | 312 | 294 | 9.1E-86 | ||
| TIGRFAM | 20 | 315 | 296 | 2.7E-81 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| CDD | 22 | 491 | 470 | 1.57355E-139 | – | |
| Phobius | 23 | 43 | 21 | - | – | |
| SUPERFAMILY | 23 | 502 | 480 | 2.62E-66 | ||
| Phobius | 44 | 49 | 6 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 50 | 68 | 19 | - | – | |
| Phobius | 69 | 73 | 5 | - | – | |
| Phobius | 74 | 97 | 24 | - | – | |
| TMHMM | 75 | 97 | 23 | - | – | |
| PRINTS | 76 | 95 | 20 | 1.8E-18 | ||
| ProSitePatterns | 81 | 106 | 26 | - | ||
| Phobius | 98 | 108 | 11 | - | – | |
| Phobius | 109 | 131 | 23 | - | – | |
| TMHMM | 110 | 132 | 23 | - | – | |
| Phobius | 132 | 136 | 5 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 137 | 159 | 23 | - | – | |
| Phobius | 160 | 225 | 66 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 226 | 248 | 23 | - | – | |
| PRINTS | 236 | 246 | 11 | 1.8E-18 | ||
| Phobius | 249 | 262 | 14 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 263 | 286 | 24 | - | – | |
| Phobius | 287 | 292 | 6 | - | – | |
| Phobius | 293 | 312 | 20 | - | – | |
| TMHMM | 293 | 312 | 20 | - | – | |
| Phobius | 313 | 399 | 87 | - | – | |
| Pfam | 400 | 503 | 104 | 4.7E-26 | ||
| Phobius | 400 | 426 | 27 | - | – | |
| TMHMM | 404 | 426 | 23 | - | – | |
| PRINTS | 405 | 426 | 22 | 1.8E-18 | ||
| Phobius | 427 | 437 | 11 | - | – | |
| PRINTS | 428 | 440 | 13 | 1.8E-18 | ||
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 438 | 459 | 22 | - | – | |
| Phobius | 460 | 464 | 5 | - | – | |
| TMHMM | 465 | 487 | 23 | - | – | |
| Phobius | 465 | 489 | 25 | - | – | |
| Phobius | 490 | 524 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0212400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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