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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212400 |
| Transcript ID | LotjaGi6g1v0212400.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT1G30220.1 inositol transporter 2; Swiss-Prot: sp|Q9C757|INT2_ARATH Probable inositol transporter 2; TrEMBL-Plants: tr|A0A151SI54|A0A151SI54_CAJCA Putative inositol transporter 2; Found in the gene: LotjaGi6g1v0212400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51013074..51019376) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGGAGGTGTACCAGAAGCTGACATGTCTGCTTTCAGAGAATGTTTATCTCTTTCATGGAAAAACCCTTATGTTCT TCGCCTTGCTTTCTCTGCTGGAATCGGTGGCCTCCTCTTTGGCTACGATACCGGTTAGTTTAATTTCTAACTAACTAACT AACCAACAAAATCCCCTGTTACATTTATTCCCCTGTTTCAAATCCTCTGTTTCATCATACATATCACATACCAAAATTAC TCATCTACTCTAAAAATCAAAATTATCATGTTAATTCTAACTTCTAAGTGTAATTTTCATCTGGGTCATGCTACAAATTT AAATTAAATAAATATATAGGATAAAGTTTCATTTTATGTTTTTTCTTAGCATGTGATGTATGCGCATATTATTGTTATGT GTGCTATGGTTGATATGTAATTGGTGGGGTATCTGTATGTATCTGCAGGAGTTATATCTGGGGCTCTTCTGTATATCAGA GATGACTTCAAAGCAGTAGATAGAAAAACTTGGCTTCAGGTAATCTCTCTCTCGCTCTCTCTTGAAAATTGAGATAATTC ATTAATGAATGATCTTACTCTCCCAATCAACTCAAATCACCTCTTGTGAACCCCAACCTACTTGAATGGACATTAATGCC CCCCTCACCTCCTCTGTTCACAACCACCAACTTGCTGTAAAAAAGGACAAAACTTGGCATCGTTTTCTATGTTACATGTT CTTTGGACATATTGTCTGTACCCTTTTTTGTGAAGAAAAAATGTATTGAAATGTGTATTATTTTTCCATTTTTCATATTT TTTTGACTAGTAAACAAAGAGGTTTTAGTCTAATTTCTTGCTGAAAAATCAACACACTTCTTAAGATAAACTCAATTATT TCCTTTTTCTTTACATGATTTCTTCATAATTTGACTAGCAGCTTGAGAAATGCTGACTCTGTTTTATTTTTTTGGTAGTA CATAAAATACTGACTCTATTTCTCAGGTGATAATTGTTTTTTTTTTTTAATTGCAAAGTTTCATGATATATATCATAGTA GATTTGTATTAAGGTTGTGTTTTTTAATTTGAGTTCACAGATTTTCAAATCGGTTTCGGCGGATAAAAAAACTACAGGAT CCGGATTCACCGGATGAGATCCATTAAATATTTTGGTTTGGATATATTCACATATTTATTTATTTTTTAATACAAAATAT TAAATACATTTTTAAAGTAATAAAAATATTAAATACGTGAACCCAGAGTTGTTTTTTCTTCCCACGGTGTCTTTAGAGAT AAAAAAATGTTAATCTCCTTGACTTACACGCTGAATATCTGCCTGATAAATTCAAAGAAAAGAGTTAAGGATGCTGAAAA CGATATATATCTAATTACTTTTTTTGGTACACGATATAAATCTAATTACTACTATCAAAATATAGATATAGATATAGATA TTTTTTTTTGGTATCTAGGTATCAGTAGGATTTGAACCTAGGATTTGAGAAATTTTAATCGATCAAGTACCATTTAGGCT ATTAATACTAGTAATATAGATATAGATATAAGCATAAGTAAATTTGTTTTGGTTACAAATAAGCATAAGTAGTTGAAATT ACCTGTCTTTTGTGGATTTTCATTTTTAGTTAAAATTGAAACGTTAACAATACATTTTTCCTTCAAAAGTAATAATACTT TATCTCAATTACTACTTTTAATGTGCTATTTACAATGAAGTTAAGAAAGAAAAAAGATGAGGAACATGTGATTTGGTTTC AAAATAAATGTCTGTGGTCTAATAGAAACATGCCACATATGAACCCAAAAAAATGGAAAATAAGTGTCCTAATCATGTCA TGCTTGAGCAAGTGCTTGATTTGCCCAATAGGGGGAGGTTGCCCACTTACCCAACAAGGCAAATTGAACACCAGCTAGCT ACTAAACCATTCAAAACCAGGCAATTCCTATTATGTTCTTAACCATCCTCAATCGTCAAATCAAATAATTAAACAAAAAA ATAGATGGGACGTTTTAATTTTAATATGATTCTACCATACAATAACAGCTCATGCTACATCCAAATCCAATTCAGATTTG GTTAGTTAAAAAAGGAAGTATGCCTTTAACATACACAAGTAAAAACTTGTGTAACATTGCACAAGCTCCTTTTGACCTCT TATAGCAGGTTTTCCGGTTTTTTATTTTAAAAAAAATTCAAAATACTTATTTTATTAATCACAATATTTATGCTAATCTT TCTCATTATCACCTTCATCCTCTAACAAAACCCTAGCTGTCACCTCCTTCATCTCTCCCATGACCTCGCCGTCACACATT CATGGCCGTGCCGCCACCACCACTCCTTCTTACTCCTGACCTCGTTTCCTTCGTTCTCAACCGCGCCACCGCCATGCTCT TCTGTGTTCAGCGCCGCCGCCACGCTCCTCCTCTGTTACTGTGACCGGCTCCGTCGCACGCTCCTCGCCGGTTCCAGCGC CGATCTCCCTCACGAGGTCCGATCCGCCGCTTTTTGGTTGTGAAGCTTCTCAGATCTGGTTTCCCTGCGGCGGTCTGCGG TTTGGATCCCGCGGTGGTTCTGGTGGACTGAGGGGAGCATGGAGGTTTACGAGATCTGGAAATGAAAAATCCAGATCTGT TTTTGCAGAGATTGAAGAACACCATGATGAAGATGAAGACAACGGTGAATCTCTTCAATTATAGTTGTGTGGTTCCTTTC TTATATGATTGTCATTGTGGGGTATTGTTGTTGGTGAGGGATCTGAGGAGGAAGAGGGCTTTTTTGTGACATGGGTGTTT ATCATGCTCTGCAAGATTATTGCATGTTTCTATGCTTTTGTTCACCTGTCCTGGATTTTAACTTGATTTGCTTGAGGTGG TTGGTATTTTTCAATATATTAATGAAATCATGCCAATAATATAAGAAAGGAACCGCAAGAGGGAATGAAGAAGTTTCGTA TGATGAATGAAAAAGTGGGATGACGAACATGATTTGAGGATGAAGATGAACTTAGATGTGATTAACCTAAATCCTTAATT AATTAATTCACTAATAAATATTTTTTTTGTTTTTGAATTATTTTTTAAAAAAAAATATTGAAAACCTGTTACCATGGGTC AAAAGGTGCTTGTGTAACCTTACACAAGTTTTTACTTGTGCATATTAAAGATTTCCATATGTTTGATTTTTTTAAACAAT GGTTAGAGTTTGAGATGGAAAAAAACTATGAAGTGGATATTCAGTTCCCATCTCAAATAACATATCAGAAAAAATCCAAT CCAGATTTCCTTTTTTCACACTTCTATTTATTTTAATTTTGTTGATGATCAAACCAATTCTTTTTGCGATTATGTGTAAC TCAATTGAGTTCATGATTTGAATTTCATTCGAAAATTAGGGCGAAGCCAAAATCATGGCAGATAGAAGCAAAAGCTAAGG AAAATTTCTTTTATCTACCATGATTTTGGCCTCATCATAGTTTTCGAATGAGTTTCCAAACATGCACGAAAGCTGTTAAA TGGGATTCATCAAAACCTAGAGTGCAGTCATGGAAATCATTCCTTATGCAATAGCTCTTGAGTCAATTTTCCTTTTCTAA ATGAAAGAGCGAATAAAAAATGTATGATTCTTTCTTTTTGGATTGAAAGTACTTATTTTGGTGTATGTAATAGTGAATCA ATCATGGAAAAATGTTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATCATAGGAGCTGCAGTTGGAGGATGG ATCAATGACAGGTTTGGAAGGAGAGTAGCAATAATTATTGCAGATACCCTCTTTTTAATAGGGTCTGTAATCATGGCTGC TGCTCCAAATCCAGCTATTCTCTTATTTGGTAGAGTTTTTGTTGGATTTGGTGTTGGCATGGCTTCAATGGCTTCCCCTT TGTACATTTCTGAGGCTTCCCCAACTAGAGTGAGAGGAGCACTTGTCAGTCTCAACAGTTTTCTTATAACTGGAGGACAG TTCCTTTCCTACCTCATCAACTTGGCCTTCACTAATGTATGTACAATTCTCAAGTTTGAAACACTTGTTTATACAATGCT TGATAACTGTTTGTAGAAATGTCACACTTTTGTTTATTTTATACTATGTTACTTTAGATGCATGATAGATTGCTTTAAAA AAATGTGTTTTGTTTTTTCAAAATCCACATGAAAAGTATGTTCCAAAGAGAATGTTATTACTTATATCATTGTTATTTTT TTTTCGTCTGAATTTCACACCTTTTGTTTGGTGATGATGAGCTAAAAGAATTTGCTGCTGGTTTTTGAATTTTCACTCAG GCACCAGGGACATGGAGATGGATGTTAGGGGTAGCAGCAGCACCTGCTATAATACAAATTGTGCTGATGTTGTCACTCCC TGAGTCTCCTCGTTGGCTGTACCGGAAGGTTAGTTCTTCGTCACTAGTTATAGTGTGTTCGGATCAGCTTCTCTTTTGTA AGAATCACTTTTGAATTCAGAAGTTTCTCCCCATAATAGATTATGACTTCAGAATCAATTGTAAAAGGGTTTCCAACTAG TCATCAAGCATCACCAAATTTTCAGTCAATGAAATTCCAAAAGTCTTCACTGTTGTTCCTATTTTGATTTTCATGTTTTT TCTTTCCCAATTTGAAACAGGGTAGGGAGGAAGAATCAAAATCAATTCTGAAGAAGATTTACGCTCCAGAGGATGTTGAC GCTGAAATTGAAGCGTTAAAGGAATCAGTTGAATCTGAAATTGAGGAATCAAAAACATCAAAGATAAGCATGATGACACT TTTGAAAACCACAACTGTTAGAAGAGGTCTTTATGCAGGGATGGGACTCCAATTCTTCCAGCAGTTTGTGGGAATCAACA CTGTAATGTACTACAGTCCCACCATTGTTCAACTTGCTGGTTTTGCATCTAACAGGACAGCCCTGCTTCTGTCACTAATC ACCTCTGGCCTAAATGCTTTTGGTTCCATTTTGAGCATATATTTCATTGACAAGACTGGCAGAAAAAAACTTGCCCTGAT CAGTTTATGTGGTGTTGTGCTTTCCCTGGCTCTTCTTACTGTCGCTTTTCGTGAGAGTGAGCTTCATGCTCCAACAGTTA GTGCCATTGAAACCTCTCATTACAATAACACATGCCCTGATTTCAGAGCAGCTGTGAACCCTGGTAGATGGACTTGCATG ACTTGCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCTTCTCCTAACAAGGTAAATCTATTCTACACTCACATTTT ACCAAAACCATACAATATTGCAAGAGTATATCTATAACATATTCATATTTTGTCATGAACAAATTATCAGAAAAGATTGG GTAAAAGATGCGTGAATGATTTTATATTATGTTTCTAAAACAAACCCTCACGTATGAGCTAATTAGGCTTTAAGCGCGAA CAATGCACGGATTTGAATTTAGTGCAGTTGACTGCGGTCACAAATACAAGTCTTATGATTAAAGATTAGATGGGTCATAT TTTTAGCATATGTTTGTACTTTATTTACTAAGATCAAATCTGAAACGTTCGATCTTAATCCAATGACTAACATTCAATGG TTGCCCTAAATGCGTCAAAAAGGACTGCAGGCACTGAAGTTTAACTTTTTTGTCAGAATAATTGGAGAAAACAATGATTG AAGTCTAGACTATTTGGTCATAGAGATTCTGATAGCATATCATGAACCAATATCTCAAAATCTAAAGCTGTTGAATATAT GACATGTGAATGATTTTATATTATATTTTCTAACATATTTATTGACATTACTATAAATGAAATTTGCAGCTCTTACCTGG GGCATGTTTGATTTCCGATGACACTACAAAGGATATGTGTGGAAATGATCACAGGGCATGGTACACTAGGGGATGTCCAA GTAAATTTGGTTGGGCTGCTCTAGTTGGGCTTGCTCTCTACATCATTACCTTCTCACCAGGGATGGGGACAGTTCCATGG GTTATCAACTCTGAGATCTATCCCTTGAGGTATAGAGGGGTTTGTGGAGGAATTGCATCCACCACTGTTTGGATTTCCAA CTTAATTGTTTCACAGTCTTTTCTGTCCTTGACACAAACTATTGGGACAGCATGGACATTCATGATGTTTGGAATTTTGG CTGTTGTAGCCATTTTCTTTGTCATTGTTTTTGTGCCTGAGACCAAAGGGGTTCCAATGGAGGAAGTGGAGAAGATGCTG GAACAAAGATCTCTGCAGTTCAAGTTTTGGCAGAAGAGAGATTCTGGCTCTGAGAAGCACTAA
CDS sequence (LotjaGi6g1v0212400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGAGGTGTACCAGAAGCTGACATGTCTGCTTTCAGAGAATGTTTATCTCTTTCATGGAAAAACCCTTATGTTCT TCGCCTTGCTTTCTCTGCTGGAATCGGTGGCCTCCTCTTTGGCTACGATACCGGAGTTATATCTGGGGCTCTTCTGTATA TCAGAGATGACTTCAAAGCAGTAGATAGAAAAACTTGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATC ATAGGAGCTGCAGTTGGAGGATGGATCAATGACAGGTTTGGAAGGAGAGTAGCAATAATTATTGCAGATACCCTCTTTTT AATAGGGTCTGTAATCATGGCTGCTGCTCCAAATCCAGCTATTCTCTTATTTGGTAGAGTTTTTGTTGGATTTGGTGTTG GCATGGCTTCAATGGCTTCCCCTTTGTACATTTCTGAGGCTTCCCCAACTAGAGTGAGAGGAGCACTTGCACCAGGGACA TGGAGATGGATGTTAGGGGTAGCAGCAGCACCTGCTATAATACAAATTGTGCTGATGTTGTCACTCCCTGAGTCTCCTCG TTGGCTGTACCGGAAGGGTAGGGAGGAAGAATCAAAATCAATTCTGAAGAAGATTTACGCTCCAGAGGATGTTGACGCTG AAATTGAAGCGTTAAAGGAATCAGTTGAATCTGAAATTGAGGAATCAAAAACATCAAAGATAAGCATGATGACACTTTTG AAAACCACAACTGTTAGAAGAGGTCTTTATGCAGGGATGGGACTCCAATTCTTCCAGCAGTTTGTGGGAATCAACACTGT AATGTACTACAGTCCCACCATTGTTCAACTTGCTGGTTTTGCATCTAACAGGACAGCCCTGCTTCTGTCACTAATCACCT CTGGCCTAAATGCTTTTGGTTCCATTTTGAGCATATATTTCATTGACAAGACTGGCAGAAAAAAACTTGCCCTGATCAGT TTATGTGGTGTTGTGCTTTCCCTGGCTCTTCTTACTGTCGCTTTTCGTGAGAGTGAGCTTCATGCTCCAACAGTTAGTGC CATTGAAACCTCTCATTACAATAACACATGCCCTGATTTCAGAGCAGCTGTGAACCCTGGTAGATGGACTTGCATGACTT GCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCTTCTCCTAACAAGCTCTTACCTGGGGCATGTTTGATTTCCGAT GACACTACAAAGGATATGTGTGGAAATGATCACAGGGCATGGTACACTAGGGGATGTCCAAGTAAATTTGGTTGGGCTGC TCTAGTTGGGCTTGCTCTCTACATCATTACCTTCTCACCAGGGATGGGGACAGTTCCATGGGTTATCAACTCTGAGATCT ATCCCTTGAGGTATAGAGGGGTTTGTGGAGGAATTGCATCCACCACTGTTTGGATTTCCAACTTAATTGTTTCACAGTCT TTTCTGTCCTTGACACAAACTATTGGGACAGCATGGACATTCATGATGTTTGGAATTTTGGCTGTTGTAGCCATTTTCTT TGTCATTGTTTTTGTGCCTGAGACCAAAGGGGTTCCAATGGAGGAAGTGGAGAAGATGCTGGAACAAAGATCTCTGCAGT TCAAGTTTTGGCAGAAGAGAGATTCTGGCTCTGAGAAGCACTAA
Protein sequence (LotjaGi6g1v0212400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSTAIAGAI IGAAVGGWINDRFGRRVAIIIADTLFLIGSVIMAAAPNPAILLFGRVFVGFGVGMASMASPLYISEASPTRVRGALAPGT WRWMLGVAAAPAIIQIVLMLSLPESPRWLYRKGREEESKSILKKIYAPEDVDAEIEALKESVESEIEESKTSKISMMTLL KTTTVRRGLYAGMGLQFFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALIS LCGVVLSLALLTVAFRESELHAPTVSAIETSHYNNTCPDFRAAVNPGRWTCMTCLKASPSCGFCAASPNKLLPGACLISD DTTKDMCGNDHRAWYTRGCPSKFGWAALVGLALYIITFSPGMGTVPWVINSEIYPLRYRGVCGGIASTTVWISNLIVSQS FLSLTQTIGTAWTFMMFGILAVVAIFFVIVFVPETKGVPMEEVEKMLEQRSLQFKFWQKRDSGSEKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 5 | 156 | 152 | 5.2E-270 | – | |
| PANTHER | 5 | 156 | 152 | 5.2E-270 | – | |
| SUPERFAMILY | 18 | 525 | 508 | 2.62E-66 | ||
| ProSiteProfiles | 29 | 516 | 488 | 41.238 | ||
| Phobius | 29 | 54 | 26 | - | – | |
| Pfam | 30 | 156 | 127 | 3.6E-33 | ||
| TMHMM | 32 | 54 | 23 | - | – | |
| CDD | 32 | 514 | 483 | 1.92505E-144 | – | |
| PRINTS | 37 | 47 | 11 | 1.5E-25 | ||
| Phobius | 55 | 65 | 11 | - | – | |
| Phobius | 66 | 89 | 24 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 90 | 94 | 5 | - | – | |
| Phobius | 95 | 116 | 22 | - | – | |
| TMHMM | 99 | 116 | 18 | - | – | |
| Phobius | 117 | 122 | 6 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| PRINTS | 123 | 142 | 20 | 1.5E-25 | ||
| Phobius | 123 | 143 | 21 | - | – | |
| ProSitePatterns | 128 | 153 | 26 | - | ||
| Phobius | 144 | 162 | 19 | - | – | |
| PANTHER | 157 | 537 | 381 | 5.2E-270 | – | |
| PANTHER | 157 | 537 | 381 | 5.2E-270 | – | |
| Pfam | 160 | 335 | 176 | 6.9E-46 | ||
| TMHMM | 160 | 182 | 23 | - | – | |
| Phobius | 163 | 182 | 20 | - | – | |
| Phobius | 183 | 248 | 66 | - | – | |
| TMHMM | 248 | 270 | 23 | - | – | |
| Phobius | 249 | 271 | 23 | - | – | |
| PRINTS | 259 | 269 | 11 | 1.5E-25 | ||
| Phobius | 272 | 285 | 14 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 286 | 309 | 24 | - | – | |
| Phobius | 310 | 315 | 6 | - | – | |
| Phobius | 316 | 335 | 20 | - | – | |
| TMHMM | 316 | 335 | 20 | - | – | |
| Phobius | 336 | 422 | 87 | - | – | |
| Phobius | 423 | 449 | 27 | - | – | |
| Pfam | 423 | 526 | 104 | 5.1E-26 | ||
| TMHMM | 427 | 449 | 23 | - | – | |
| PRINTS | 428 | 449 | 22 | 1.5E-25 | ||
| Phobius | 450 | 460 | 11 | - | – | |
| PRINTS | 451 | 463 | 13 | 1.5E-25 | ||
| TMHMM | 456 | 478 | 23 | - | – | |
| Phobius | 461 | 482 | 22 | - | – | |
| Phobius | 483 | 487 | 5 | - | – | |
| Phobius | 488 | 512 | 25 | - | – | |
| TMHMM | 488 | 510 | 23 | - | – | |
| Phobius | 513 | 547 | 35 | - | – | |
| Coils | 547 | 547 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0212400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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