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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212800 |
| Transcript ID | LotjaGi6g1v0212800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G30440.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9S9Q9|Y1044_ARATH BTB/POZ domain-containing protein At1g30440; TrEMBL-Plants: tr|A2Q365|A2Q365_MEDTR BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3; Found in the gene: LotjaGi6g1v0212800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51060758..51064070) extracted from Lotus japonicus Gifu genome v1.2.
GAATCCTGTTAAATGACCTTGCAAAGTGTAATGAACTCCTTAGCGCTACTACGATTTTGGTTGTTCTATGTTTCTTTTAT AGCCTACGCTTTGATAAGTCAGATTGGTGTTTGTTCAACTAGACAGTGAAGGATGGGATTTTTCTTTCTGTCTTGATTCC TAAATTAAGCCATTTAAATGAGACTATTCTTAGTACAGCCTGATTGGAAATGCATTGTATCTAATGGAACTTCAATGAAA TTTAGTCATTTTTACACAATGTATAATATTTTAATGTTTTGACTGCTGTTATATCCATAGGTTCTGCACAACCGGGCTAC CTAGTGATATAGTTGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGGTATATGATATCTATTATCTAGTTCTTTTA ACATACTTTTACCACTTATAGTTAGTGCACTATACAGATAGTATTAGCTTACTTAAATTTCTAGCTTTTTATAGAAGATC TGATTATCCATAAATTCCAAAGTTTACATGAAGATAGACATAACAGAGTTTACATTAGTACCTTAGCAATATGTTGCTTT ACCATGTTATAAAGTATGCTGTCAATTTCTGCGTTGTTCAAAATACTTGATATTGATTGATACTGGAATGTGGTTGCAGT TGGTAATGTTTCTTCGCAAAAAGATTACTTGATATTGCATTATTATTATATTATTGTGTCTTGGGGGATTATGCAAATGA AATGTGCAGAGGGACAGTATTTGGTTCTGGTTTTGGAAAAGCATGCCAATTTATAGTTCAATATTCCTTCATATATTGGC ATGTTTGACTTTGCAGTTTATAGAAAATAGCTTTTCTACTAAGAAGCTCTGTCTCAGTATTTTGCGTATAAGCTTTTCTG AATATAAAATAAGCTGACCTGAGTACACACTTAATACAGTTTCCCTTGCTCTCTAAAAGTGGGGTTATGGAAAAACTGAT TGCTGAAGCTTCTGAGTCAGAGGAAGAATGTGCCATCCACCTTCCTGATATTCCTGGCGGGGCGAAAACATTTGAACTTG TGGCAAAATTCTGCTACGGTGTGAAACTTGAACTTACTGCGTCCAATGTTGTGCACCTCTGGTGTGCTGCTGAGCACCTT GAAATGACTGAGGAAAATGGTGAAGGTAATCTAATTTCACAGGCCGAAACCTTCTTCAGTCAGGTGGTTCTCCGAAGTTG GAAAGACTCTCTGAGGTCACTTCAAACCTGTGATGATGTTCTGCCTGATGCGGAAAAGCTCCACATTGTGAAAAGGTGCA TTGAATCACTTGCTGCAAAGGCATCTACTGACCCAAATTTATTCGGGTGGCCAGTACTGGAACGTGGTGGGCCTTTGCAG AGCCCTGGCGGAAGTGTCTTGTGGAACGGAATAAGTACTGGGGCAAGACCAAAGAATTCAAGTGCAGATTGGTGGTATGA GGATGTAACAAATTTGAGTTTACCTATTTATAAGAGGTTGATAGCTGTTATGGAATCTCGAGGAATTCGGCAGGAGATCA TTGCTGGTTCTCTTGCTTTCTATGCTAAAATGTATCTACCAGGGTTGAATAGACGCCAGGTTTCTGGTGAGTCCAGCACC CGTCTGACACAGATGGCTTTGGGGTCTCCACCGTGTGAAGAAGACCAGAAGATTCTACTGGAAGAGATTAACCGGTTACT CCCATTGCAGAAGGGCCTGGTCCAAACAAAGTTCCTCTTTGGTCTACTTCGAACAGCCATGATTCTACGAGTGGACTCCT CTTGCATATCAGATTTGGAGAAACGTATTGGGATGCAGCTTGATCAAGCTAATCTGGAAGATCTCTTGATGCCAACTTTC TCATACTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGAGAATTTCCTTGCCATGGATCAGGCTAC AGGTGCTGCCTCTCCATGCTCAATTGATGATGGCGAGTTGATGGGATCGCCTTCATTAACGCCAATCACCATGGTAGCCA AGCTGATCGATGGTTACCTGGCAGAAGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCATGCCCTTGCTGCTGCT GTTCCTGAGTATGCCAGGCCTTTAGATGATGGTTTATATCGCGCTATAGATATTTTTTTGAAGGTACGTATCTAGAGCAA GTTATATTATAATATGTTTTGGATGTGGTATATAGAGCCCATTTGGGTACGGATTTATTGGAGTTTATCTACTACAAAAA ACACTAGATAAGCTCCAATAAGTGCTCTTTGGTTTGCATTCAAATGGTTCCTAAGCTAAATTTGTAGCACTATATATGTT TGTCTAATACTATTGTCAATTCTGCTTTATTTAATTATTGTCCTTGATTTGAGTGAGAATACCTTACCCACACATATTTA TCTATAATCAAGGTATCATATCGCGGTCATCTTTGTAGTCAGTTTTCAAATCATATTCTGTTCCTTTTATTTCACATCAT TTAGCACTAGTTAGCATCATTTTCTGGTAGTCATTTATAGCATGTTTGGATTAGTTTCTCTTTCATTAGAATCAATTATG AAACTTAGAAGCTTCTCCCCATAATTGATTTTGGCTTAAGAGTCTATTGTATAAGGGTTTCCAAACATGCACGAGGGCTT AAGAACATATTTTGCCAATTGTGAACTTCGAACTACTTTGGACTGATTCACTGTTTCTGTCTGTCACACAAAACTGCAGT CTCACCCGTGGTTAGTGGAGTCTGAGAGAGAGCAACTGTGCAGGCTGATGGACTGCCAGAAGCTCTCACTAGAAGCATGC ACGCATGCTGCGCAGAACGAGAGGCTACCCATTAGAATAATAGTTCAAGTTCTATTCTTCGAGCAGCTCCAGCTCCGGAC TTCAATCGCTGGTTGCTTCCTGGTTTCAGATAATCTCGATGGATCGAGACAGCTAAGAAGTGGTTTTGTCGGGTCCAACG AGGGTGGCGGCGGCTGGGCGTCCGCGGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTG TCAGAGCTTGAGAAAGAGTGCTCAACCATGAGGCAGGAGATTGAGAAACTGGGTCGTTCAACAAAGGGATCATCATCGAG CACTTGGGGAGCTGTGTCCAAGAAGCTCGGGTTTAAGATGAAGTCTCAGATGTGCAGTGCTCAAGAAGGATCCGTTAGCA ACCAGAACAATGGAAGTAATAAGGTTGTGAAGTTGAAGGAGAGACAAGTTAAGCACCAGAGAAGTTCTTCCATTAGTGAT AAAGCTTCACTCTCTTCAATTGTTCTTTCTTAG
CDS sequence (LotjaGi6g1v0212800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTTGCAAAGTGTAATGAACTCCTTAGCGCTACTACGATTTTGGTTCTGCACAACCGGGCTACCTAGTGATATAGT TGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGTTTCCCTTGCTCTCTAAAAGTGGGGTTATGGAAAAACTGATTG CTGAAGCTTCTGAGTCAGAGGAAGAATGTGCCATCCACCTTCCTGATATTCCTGGCGGGGCGAAAACATTTGAACTTGTG GCAAAATTCTGCTACGGTGTGAAACTTGAACTTACTGCGTCCAATGTTGTGCACCTCTGGTGTGCTGCTGAGCACCTTGA AATGACTGAGGAAAATGGTGAAGGTAATCTAATTTCACAGGCCGAAACCTTCTTCAGTCAGGTGGTTCTCCGAAGTTGGA AAGACTCTCTGAGGTCACTTCAAACCTGTGATGATGTTCTGCCTGATGCGGAAAAGCTCCACATTGTGAAAAGGTGCATT GAATCACTTGCTGCAAAGGCATCTACTGACCCAAATTTATTCGGGTGGCCAGTACTGGAACGTGGTGGGCCTTTGCAGAG CCCTGGCGGAAGTGTCTTGTGGAACGGAATAAGTACTGGGGCAAGACCAAAGAATTCAAGTGCAGATTGGTGGTATGAGG ATGTAACAAATTTGAGTTTACCTATTTATAAGAGGTTGATAGCTGTTATGGAATCTCGAGGAATTCGGCAGGAGATCATT GCTGGTTCTCTTGCTTTCTATGCTAAAATGTATCTACCAGGGTTGAATAGACGCCAGGTTTCTGGTGAGTCCAGCACCCG TCTGACACAGATGGCTTTGGGGTCTCCACCGTGTGAAGAAGACCAGAAGATTCTACTGGAAGAGATTAACCGGTTACTCC CATTGCAGAAGGGCCTGGTCCAAACAAAGTTCCTCTTTGGTCTACTTCGAACAGCCATGATTCTACGAGTGGACTCCTCT TGCATATCAGATTTGGAGAAACGTATTGGGATGCAGCTTGATCAAGCTAATCTGGAAGATCTCTTGATGCCAACTTTCTC ATACTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGAGAATTTCCTTGCCATGGATCAGGCTACAG GTGCTGCCTCTCCATGCTCAATTGATGATGGCGAGTTGATGGGATCGCCTTCATTAACGCCAATCACCATGGTAGCCAAG CTGATCGATGGTTACCTGGCAGAAGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCATGCCCTTGCTGCTGCTGT TCCTGAGTATGCCAGGCCTTTAGATGATGGTTTATATCGCGCTATAGATATTTTTTTGAAGTCTCACCCGTGGTTAGTGG AGTCTGAGAGAGAGCAACTGTGCAGGCTGATGGACTGCCAGAAGCTCTCACTAGAAGCATGCACGCATGCTGCGCAGAAC GAGAGGCTACCCATTAGAATAATAGTTCAAGTTCTATTCTTCGAGCAGCTCCAGCTCCGGACTTCAATCGCTGGTTGCTT CCTGGTTTCAGATAATCTCGATGGATCGAGACAGCTAAGAAGTGGTTTTGTCGGGTCCAACGAGGGTGGCGGCGGCTGGG CGTCCGCGGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCAGAGCTTGAGAAAGAG TGCTCAACCATGAGGCAGGAGATTGAGAAACTGGGTCGTTCAACAAAGGGATCATCATCGAGCACTTGGGGAGCTGTGTC CAAGAAGCTCGGGTTTAAGATGAAGTCTCAGATGTGCAGTGCTCAAGAAGGATCCGTTAGCAACCAGAACAATGGAAGTA ATAAGGTTGTGAAGTTGAAGGAGAGACAAGTTAAGCACCAGAGAAGTTCTTCCATTAGTGATAAAGCTTCACTCTCTTCA ATTGTTCTTTCTTAG
Protein sequence (LotjaGi6g1v0212800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLQSVMNSLALLRFWFCTTGLPSDIVVEVGEMSFHLHKFPLLSKSGVMEKLIAEASESEEECAIHLPDIPGGAKTFELV AKFCYGVKLELTASNVVHLWCAAEHLEMTEENGEGNLISQAETFFSQVVLRSWKDSLRSLQTCDDVLPDAEKLHIVKRCI ESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVTNLSLPIYKRLIAVMESRGIRQEII AGSLAFYAKMYLPGLNRRQVSGESSTRLTQMALGSPPCEEDQKILLEEINRLLPLQKGLVQTKFLFGLLRTAMILRVDSS CISDLEKRIGMQLDQANLEDLLMPTFSYSMETLYNVDCVQRILENFLAMDQATGAASPCSIDDGELMGSPSLTPITMVAK LIDGYLAEVAPDVNLKLPKFHALAAAVPEYARPLDDGLYRAIDIFLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQN ERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSNEGGGGWASAVKENQVLKVGMDNMRMRVSELEKE CSTMRQEIEKLGRSTKGSSSSTWGAVSKKLGFKMKSQMCSAQEGSVSNQNNGSNKVVKLKERQVKHQRSSSISDKASLSS IVLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 10 | 18 | 9 | - | – | |
| SUPERFAMILY | 14 | 110 | 97 | 8.63E-18 | ||
| PANTHER | 16 | 630 | 615 | 0.0 | – | |
| CDD | 16 | 118 | 103 | 6.36411E-45 | – | |
| PANTHER | 16 | 630 | 615 | 0.0 | ||
| Gene3D | 17 | 169 | 153 | 7.8E-13 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Pfam | 23 | 109 | 87 | 2.8E-8 | ||
| Phobius | 24 | 644 | 621 | - | – | |
| ProSiteProfiles | 24 | 93 | 70 | 11.647 | ||
| Pfam | 209 | 474 | 266 | 2.3E-94 | ||
| ProSiteProfiles | 209 | 498 | 290 | 92.343 | ||
| Coils | 540 | 574 | 35 | - | – | |
| MobiDBLite | 601 | 617 | 17 | - | – | |
| MobiDBLite | 601 | 644 | 44 | - | – | |
| MobiDBLite | 630 | 644 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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