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LotjaGi6g1v0228400.2

Overview

Field Value
Gene ID LotjaGi6g1v0228400
Transcript ID LotjaGi6g1v0228400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT1G72770.1 HYPERSENSITIVE TO ABA1; Swiss-Prot: sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6; TrEMBL-Plants: tr|V7B2M7|V7B2M7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0228400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:53434833..53439655) extracted from Lotus japonicus Gifu genome v1.2.

TTGCAACATTTTCTTCTCTCTTACTCTCTTGTTGGTGAAGAAAATATTTGGTCTAAGATTGTTTTTTCTATGAAAAAAAA AGGCAAATCATATCTTGAGTTTTCGGTTTTTTAGATTATCCTACCACTACTAAATGAGAGACTAATTTTCTGAGTTACTG TCAGGAATTAAAGTGAGACCCTCCCAACAATGTTTTTATTTCATACACATTAATTCAGGGATTAAATCCAGGATCACATA CTTTAGAGACCCGAGCTCATTTCACTCGCACCAACATTGGTCAATCATCTCTTAAGTATTTGTTTGTTTTCATAGGTTGA AAACATTTTTTTAAGGAAAGAAGATATAGTACTGTTTCATTGATTAAAGAATGATACATGATTATATATAACAAATAATG GCATGATTGGCATCTTCTGGTTCCTCATTTTCTTCTCTTTCCATGATTCCATTTCCCTCTTATATCCATTTTGTAGGTAA GCAACATAATTGTCTTTGCTTTCACTGTTTCTAGAGATTAATCTAATTAAATGCACTCATAAAAGGAAAATCTTCATTGT AGATATAGCAATGGCATCATAAAGTAGGTGGGAGTTGACACAACCAATAAAATCTTGAGGATGGGTGGCCATGTTGTTGC TGACACATGAAAGGAACAGAAGAGGAAATTCCCAGGGAAATTTCAATGGTAGGGGTTGATTCCCTCAGATTCAAGGAACT TGTGTTATCAATTTTGTAATAATTTTTGTTGTTGTTGTTTTTTTTCCCAACTTTTATGACCCCATTTCCCTTGTCTCATT TTTCTGCTAGAGAGAGAAAGACAAGCACCGACTTTGACAATTATATGGCTTTGGTTTCTTCAATCATCTATTCATTCTAT TGTCTTCTGTTCCAGGAATCACAGGGTTGGTGCAGAGAGTAGAAAATAGAAGATTTTGGAATGTCCTATTTATTGATAGA ATTAAATATAGGAGTTCAAAACAGGTTAGTTATAAGAAAGGAACTAGAGGCCTAATTCTAGCTTATACCTTTCCTGTTTT AGCGCATGTTTGGAAACCCTTCTATAATTGATTCCGAAGGCAGGATCAATTATGGTGAGAAGCTTCTGTGATTAGCTTCT AGGTTCCAAAATTGATTTTTAATGCAATAAATGAGCTTTATTACACTGCAGTTGACTGCTTCTGAGGAGAATGGTTTCAA GTACTTCTAGTTTCTTGCCGTAGGAGGCTTGTAGGTGTTTGATTATATGCCCAATTGAACTTGTCATAGAGAAGAGGGTT AGGAGATATAGAATTCTAGAGGATAAAGCAAAAAAAAAACATATGGAGGAAATAACTTCGGCGGTTGCAGTGCCAGTTAC ACTTGGGAATTTAATCCAGAAGGAGACAGTGGAGCTAACTGGTTTAAAGCTCATGGCAAATACTGCAGCAGCTTTAATAT TAAATCCTGCAACTGAGGGTTCTCAATCCTTCTCTGTTGCTTGTGAAGACGACATAAGGGTCAGTCCACAACATCCAATC ACAGTATCTGCAGAGTTCAAGGAGATTCAGATTGGAGCTGACCTTGTCTCAGAAATGGTTATTGAAGGCCAAAGTAATAA GCATCATGCTGAAAGCCATAACCAGGCAATAAATGAAGATGAATCTGTTGTTAGTGAGAAAAGCAGTACTTGTAGGGAGG AATCTACTATTTTAAGGACTAATTGTTATGAAATGAGTTCACCAAATACCATCAAGGTTGATGATAAAATCCATGGTGAG TCTAGTTTGGCCGAGACGCGTGCAGAGCTAGAGCCAGTGCAGAACTTGGTTTCTGTGGCTGTGGAGCTTGATACTGAAGA TGGAAGTGGGTCAGATGGGTCTGATCCAAAACCATTTGTTGCAGTTCATGGGATGCCAGAGAAGCAACCTTGCAGAACAA GCTGCCAGAATGCATTGGAATTGAGTGGCACTCCTCTTTGGGGGTTTTCATCAGTGTGTGGAAGGAGACAGGAGATGGAA GATGCTGTTGCTGTTAAGCCTCAAATTTTTGAAGTCCCTTCATGGATGCTAATGGATAAACATGTGAATGAAACCGACGA ATACACATCACTGGCACACTTTTTCGGCGTCTATGATGGACATGGGGGCTCTCAGGTATGCCTTAAAGTCCTTCTTCTCA ATTATGCAATTTTTTGTATTGTGGATGTTGGTTCATTCCATTTAACTTAGCTGGCGATGCTTTTCTAGGTTGCCAATTAC TGCCAGGAACATCTCCATTCAGTGTTGATTGAGGAGATAAAAGCTGCAGAATCAAGTTTGGCTGAAGAAAATGGGAGAGA TAACTTGCAAGAGCAATGGAACAAAGCATTCTCAAATTGCTTCCACAAAGTAGATGATGAGATTGGACGAGTTCATTCAG GTAATGGTGGAAGGAACATTGATGATGGATCTGAGTCAAGCATGGAAGAGCCTCTTACTCCTGAGACTGTTGGATCCACT GCAGTGGTTGCCATTTTGACTCAAACCCACATAATAGTTGCAAATTGTGGCGACTCAAGAGCAGTCTTGCGTCGCGGAAA GGAAGCGCTGCCATTGTCTACTGATCACAAAGTAGGGCATTTGTTTCTAGTTTCACAATTGGTCTGCCATAGTTTAGTTA GAAGCTGAAGTTATCTGATATACAACAAACAATATTTCCTGTTATGCAGCCAAATCGAGAAGACGAGTGGGCAAGGATAG AAGCTGCAGGAGGAAGGATCATACAATGGAATGGGTACCGAGTTCTGGGTGTTTTAGCCGTGTCAAGGTCCATAGGTATG TATGTCTTTGCTGTCTTGTTGCATTATTTCTTAATTCTCAATACCAGTTCATACAGTTACAAGAATTTACCCACTTACCA GGTGATAGATACTTGAAACCGTGGATAATTCCAGACCCAGAAGTCAAGTGCCTCCTTCGGGAGAAAAACGATGAGTGCCT TATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAGGCCTGTGACATGGCACGGAAGAGAATCCTTCTTT GGCATAAGAAGAATGGCGATAACATGTCAAGAGAACAAGGCCAAGGAGTTGATCCTGCAGCTCAGTCTGCTGCAGATTAT TTATCTAGACTTGCCATTCAAAGGGGAAGCAAAGATAATATCTCTGTTATTGTTATAGATTTGAAGGCTCAAAGACAATT CAAGAGAAAAGCATAAAGTAGATACACCATCATCTGGAATATTTACAGATGTACTATTGTTTTACATGTATTTTTTTCAG TCAGTAGCATATTTTAGCCCCTTCAGTTTTACACCAGGGGATAAGTTATGTATATTCAAATTTGCAGTGTACAGAGATAC CTCAATTTAAGATGAGTTATCACTGTGATAGCTGCACAAATCAGAAATTTGTATTATTTGTTTAATGATGGTAAATTTTC AAGTTAGCTACTCACATAATCAAAACAAGTATACATACCTCTGCTGACTATAAGTTTGTATTATTATCTGTATATTTTTT AATACAATGACGGTAATAAAGTTATGGTCTAATACAAACTACTCAACCACAAATCCATCAGCATTAGATGAACAGCACAA AGCTAATAAAGTTCAAATTCATGTTGTTGGTACAATCCTGATGCTTAATCTCTAAGAAAAAATTTCTCCGTGAACAGCCG ATCATTGCAATCTCACGCATTCAAGCAAAGTGTCTGAACAATTTCTTCACCTCCAATCACTCAACAATAAAATTCTGCAA GGTCACACGCAACTGGTGACCCTAGCTACAAAGAAAGGAATTAGAATTTAGAACCGAAGTTACATATCAGGTGGCTGTAG TACCTGCCAACCTAACAGAGTTCCATGACTCTTCTTATTATATATCAGGTAGAAGTGATACATGGAGCAAAATAAGCATA TTTGGATAACCTTTTATATTTTTTGAATATATACCAGGACTGGAACATACCAAGTTTTATATGGTTGCAAATGTAGGTCC TGCATTGGAGAAATAAGCTGAAAGGTCCACAGCCAAGTCGTCATACATGTTGATAAAAGGATGTCTCTGGAATTTAAATC AAATATATACTATAAGATGACTGTTTAGACTATTTTATTTGGCATACTCATATAGATGAGATTTATGCATACCATAAGTT CTGGAGCCGATGGTCGATCCTTTGGATTTTTCTGTAAACTAAACACAAAGAAGATTGAAAGAGGATCAGATTCAGAAGCC TTATAAAATTCATTCTTGAGACTACACATTTTAGTTACTGAAGCATACTTAATATTTACCATGCTGCAATAAATGAGCAA AATTCTGAAGAAAACTCATCAGATGAAACGCTAGGTGAAGGATTTTCGACAATGGCTTCAATAAGCTGGTATATATTCTC CCACCCTTCACTTTGATCGGGTGGTGTATACGGAAACATCCCCGTAGCGCACCTGAGAAACATCAGTCCCAAGCTCCATA TATCACTTTTGTAGTTGTAGCCATCCTGGCTTCCATTGATTCTCTCTGGCTGTGAAATAAGCATAATGAGTAAGCTTTAT TCAGGAGTTGGCTAGAGGAAAGTGATGAATAACTTGCATATTTTACTCACAGACATATAGACATATGTGCCAATGAAAGT ATTTGCTTGGCCAGATGTAGTTTCCATGATTGCACTCACACCAAAGTCTGTAATTTTTACCTCCCCTCTATGATTAATGA GCAGATTAGAAGGTTTCAAGTCCCTGTGGATAATATGCTTTTCATGGTGAAGATACATTAAACCCTTCAGTACCTACGTT GTAGAAATATAACAAGAAAGCGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0228400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGAAATAACTTCGGCGGTTGCAGTGCCAGTTACACTTGGGAATTTAATCCAGAAGGAGACAGTGGAGCTAACTGG TTTAAAGCTCATGGCAAATACTGCAGCAGCTTTAATATTAAATCCTGCAACTGAGGGTTCTCAATCCTTCTCTGTTGCTT GTGAAGACGACATAAGGGTCAGTCCACAACATCCAATCACAGTATCTGCAGAGTTCAAGGAGATTCAGATTGGAGCTGAC CTTGTCTCAGAAATGGTTATTGAAGGCCAAAGTAATAAGCATCATGCTGAAAGCCATAACCAGGCAATAAATGAAGATGA ATCTGTTGTTAGTGAGAAAAGCAGTACTTGTAGGGAGGAATCTACTATTTTAAGGACTAATTGTTATGAAATGAGTTCAC CAAATACCATCAAGGTTGATGATAAAATCCATGGTGAGTCTAGTTTGGCCGAGACGCGTGCAGAGCTAGAGCCAGTGCAG AACTTGGTTTCTGTGGCTGTGGAGCTTGATACTGAAGATGGAAGTGGGTCAGATGGGTCTGATCCAAAACCATTTGTTGC AGTTCATGGGATGCCAGAGAAGCAACCTTGCAGAACAAGCTGCCAGAATGCATTGGAATTGAGTGGCACTCCTCTTTGGG GGTTTTCATCAGTGTGTGGAAGGAGACAGGAGATGGAAGATGCTGTTGCTGTTAAGCCTCAAATTTTTGAAGTCCCTTCA TGGATGCTAATGGATAAACATGTGAATGAAACCGACGAATACACATCACTGGCACACTTTTTCGGCGTCTATGATGGACA TGGGGGCTCTCAGGTTGCCAATTACTGCCAGGAACATCTCCATTCAGTGTTGATTGAGGAGATAAAAGCTGCAGAATCAA GTTTGGCTGAAGAAAATGGGAGAGATAACTTGCAAGAGCAATGGAACAAAGCATTCTCAAATTGCTTCCACAAAGTAGAT GATGAGATTGGACGAGTTCATTCAGGTAATGGTGGAAGGAACATTGATGATGGATCTGAGTCAAGCATGGAAGAGCCTCT TACTCCTGAGACTGTTGGATCCACTGCAGTGGTTGCCATTTTGACTCAAACCCACATAATAGTTGCAAATTGTGGCGACT CAAGAGCAGTCTTGCGTCGCGGAAAGGAAGCGCTGCCATTGTCTACTGATCACAAACCAAATCGAGAAGACGAGTGGGCA AGGATAGAAGCTGCAGGAGGAAGGATCATACAATGGAATGGGTACCGAGTTCTGGGTGTTTTAGCCGTGTCAAGGTCCAT AGGTGATAGATACTTGAAACCGTGGATAATTCCAGACCCAGAAGTCAAGTGCCTCCTTCGGGAGAAAAACGATGAGTGCC TTATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAGGCCTGTGACATGGCACGGAAGAGAATCCTTCTT TGGCATAAGAAGAATGGCGATAACATGTCAAGAGAACAAGGCCAAGGAGTTGATCCTGCAGCTCAGTCTGCTGCAGATTA TTTATCTAGACTTGCCATTCAAAGGGGAAGCAAAGATAATATCTCTGTTATTGTTATAGATTTGAAGGCTCAAAGACAAT TCAAGAGAAAAGCATAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0228400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEEITSAVAVPVTLGNLIQKETVELTGLKLMANTAAALILNPATEGSQSFSVACEDDIRVSPQHPITVSAEFKEIQIGAD LVSEMVIEGQSNKHHAESHNQAINEDESVVSEKSSTCREESTILRTNCYEMSSPNTIKVDDKIHGESSLAETRAELEPVQ NLVSVAVELDTEDGSGSDGSDPKPFVAVHGMPEKQPCRTSCQNALELSGTPLWGFSSVCGRRQEMEDAVAVKPQIFEVPS WMLMDKHVNETDEYTSLAHFFGVYDGHGGSQVANYCQEHLHSVLIEEIKAAESSLAEENGRDNLQEQWNKAFSNCFHKVD DEIGRVHSGNGGRNIDDGSESSMEEPLTPETVGSTAVVAILTQTHIIVANCGDSRAVLRRGKEALPLSTDHKPNREDEWA RIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPDPEVKCLLREKNDECLILASDGLWDVMTNEEACDMARKRILL WHKKNGDNMSREQGQGVDPAAQSAADYLSRLAIQRGSKDNISVIVIDLKAQRQFKRKA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
91 116 26 - –
PANTHER
PTHR13832:SF650
133 536 404 5.3E-187 –
PANTHER
PTHR13832
133 536 404 5.3E-187
IPR015655
Gene3D
G3DSA:3.60.40.10
201 538 338 5.1E-109
IPR036457
SMART
SM00332
202 526 325 1.2E-99
IPR001932
SUPERFAMILY
SSF81606
211 529 319 1.7E-72
IPR036457
ProSiteProfiles
PS51746
212 528 317 52.99
IPR001932
CDD
cd00143
214 528 315 4.93674E-88
IPR001932
Pfam
PF00481
215 521 307 2.3E-65
IPR001932
ProSitePatterns
PS01032
260 268 9 -
IPR000222
MobiDBLite
mobidb-lite
327 347 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0228400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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