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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0229700 |
| Transcript ID | LotjaGi6g1v0229700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycylpeptide N-tetradecanoyltransferase; TAIR: AT5G57020.1 myristoyl-CoA:protein N-myristoyltransferase; Swiss-Prot: sp|Q9LTR9|NMT1_ARATH Glycylpeptide N-tetradecanoyltransferase 1; TrEMBL-Plants: tr|I3SJW0|I3SJW0_LOTJA Glycylpeptide N-tetradecanoyltransferase; Found in the gene: LotjaGi6g1v0229700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:53859933..53861301) extracted from Lotus japonicus Gifu genome v1.2.
TTCACTCCAGAGTTGGGATTTCTGAATTTCTGTGATCATTGCTATGGGTGATAACAATTCTCCATCTGGGTCACCAAAAC AAGATGCAAAACCAGATCTTGTTGTTGACGGAGGAGACTCCGCAATTCCCAAAGGTGACACTGACACCACCTCGCTGGAA ACCATGGTTCGGAGTTTCCAAGATTCCATGTCTGTAGGGAAGACACACAAATTCTGGGAAACCCAGCCTGTCGGCCAATA CAAGGATCTCGGCGACACCACGCTACCGGAAGGCCCAATTGAGCCGCCGACACCGCTATCTGAGGTGAAGCAGGAGCCCT ACAACCTTCCCAGTGCTTATGAGTGGACCACTTGTGACATGGAATCTGAGGAGACCTGTGATGAGGTTTATCTCCTGCTG AAGAACAATTATGTTGAGGATGATGAGAACATGTTCAGGTTCAATTACTCCAAGGAGTTTCTGAGATGGGCCTTGTGCAC TCCTGATTATTATAAATCTTGGCACATTGGGGTTCGTGCGAAATCTTCGAAGAAATTGGTGGCTTTCATCAGTGGTGTCC CTGCGAGGATTAGGGTGAGGGATAATGTTGTGAAGATGGCGGAGATCAATTTCCTGTGTGTGCATAAGAAGCTTAGGTCG AAGAGGCTTGCCCCGGTTATGATCAAGGAGGTTACTAGGAGGGTTCATTTGGAGAATATCTGGCAAGCTTCTTACACTGC TGGGGTTGTGCTTCCGACTCCGATCACGACTTGTCAGTATTGGCACAGGTCGTTGAACCCGAAGAAGCTTATTGATGTTG GATTCTCGAGGCTTGGTGCGAGGATGACGATGAGCCGTACTATCAAGCTTTACAAGCTGCCTGAATCAACTGTCACTCCT GGATTCAGGAAAATGGAGACGCGGGATGTTCCTGCCGTTACGCGGCTGCTGAGGAACTACTTGAGTCAGTTTGTTGTTGC TCCGGAGTTTGATCAGAGTGATGTTGAGCACTGGCTTCTTCCCAATGAGAATGTGGTGGATAGCTACTTGGTTGAGAGCC CTGACAGCCATGAGATTACGGATTTCTGCAGCTTCTACACTCTTCCTTCTTCCATCCTTGGGAATCAGAGTTACTCCACT TTGAAAGCTGCTTATTCTTATTATAATGTGTCTACTAAGACTCCGCTGCCTCAGCTGATGAATGATGCGCTGATTGTGGC GAAGCAGAAGGATTTTGATGTTTTCAATGCCTTGGATGTGATGCATAATGAGAGTTTCCTCAGAGAGCTCAAGTTTGGAC CTGGAGATGGACAGCTTCACTACTACTTGTACAATTACCGGATTCGGAGTGCCTTGAAACCATCTGAACTTGGGCTTGTG CTCTTGTAG
CDS sequence (LotjaGi6g1v0229700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGATAACAATTCTCCATCTGGGTCACCAAAACAAGATGCAAAACCAGATCTTGTTGTTGACGGAGGAGACTCCGC AATTCCCAAAGGTGACACTGACACCACCTCGCTGGAAACCATGGTTCGGAGTTTCCAAGATTCCATGTCTGTAGGGAAGA CACACAAATTCTGGGAAACCCAGCCTGTCGGCCAATACAAGGATCTCGGCGACACCACGCTACCGGAAGGCCCAATTGAG CCGCCGACACCGCTATCTGAGGTGAAGCAGGAGCCCTACAACCTTCCCAGTGCTTATGAGTGGACCACTTGTGACATGGA ATCTGAGGAGACCTGTGATGAGGTTTATCTCCTGCTGAAGAACAATTATGTTGAGGATGATGAGAACATGTTCAGGTTCA ATTACTCCAAGGAGTTTCTGAGATGGGCCTTGTGCACTCCTGATTATTATAAATCTTGGCACATTGGGGTTCGTGCGAAA TCTTCGAAGAAATTGGTGGCTTTCATCAGTGGTGTCCCTGCGAGGATTAGGGTGAGGGATAATGTTGTGAAGATGGCGGA GATCAATTTCCTGTGTGTGCATAAGAAGCTTAGGTCGAAGAGGCTTGCCCCGGTTATGATCAAGGAGGTTACTAGGAGGG TTCATTTGGAGAATATCTGGCAAGCTTCTTACACTGCTGGGGTTGTGCTTCCGACTCCGATCACGACTTGTCAGTATTGG CACAGGTCGTTGAACCCGAAGAAGCTTATTGATGTTGGATTCTCGAGGCTTGGTGCGAGGATGACGATGAGCCGTACTAT CAAGCTTTACAAGCTGCCTGAATCAACTGTCACTCCTGGATTCAGGAAAATGGAGACGCGGGATGTTCCTGCCGTTACGC GGCTGCTGAGGAACTACTTGAGTCAGTTTGTTGTTGCTCCGGAGTTTGATCAGAGTGATGTTGAGCACTGGCTTCTTCCC AATGAGAATGTGGTGGATAGCTACTTGGTTGAGAGCCCTGACAGCCATGAGATTACGGATTTCTGCAGCTTCTACACTCT TCCTTCTTCCATCCTTGGGAATCAGAGTTACTCCACTTTGAAAGCTGCTTATTCTTATTATAATGTGTCTACTAAGACTC CGCTGCCTCAGCTGATGAATGATGCGCTGATTGTGGCGAAGCAGAAGGATTTTGATGTTTTCAATGCCTTGGATGTGATG CATAATGAGAGTTTCCTCAGAGAGCTCAAGTTTGGACCTGGAGATGGACAGCTTCACTACTACTTGTACAATTACCGGAT TCGGAGTGCCTTGAAACCATCTGAACTTGGGCTTGTGCTCTTGTAG
Protein sequence (LotjaGi6g1v0229700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDNNSPSGSPKQDAKPDLVVDGGDSAIPKGDTDTTSLETMVRSFQDSMSVGKTHKFWETQPVGQYKDLGDTTLPEGPIE PPTPLSEVKQEPYNLPSAYEWTTCDMESEETCDEVYLLLKNNYVEDDENMFRFNYSKEFLRWALCTPDYYKSWHIGVRAK SSKKLVAFISGVPARIRVRDNVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQASYTAGVVLPTPITTCQYW HRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTVTPGFRKMETRDVPAVTRLLRNYLSQFVVAPEFDQSDVEHWLLP NENVVDSYLVESPDSHEITDFCSFYTLPSSILGNQSYSTLKAAYSYYNVSTKTPLPQLMNDALIVAKQKDFDVFNALDVM HNESFLRELKFGPGDGQLHYYLYNYRIRSALKPSELGLVLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 37 | 37 | - | – | |
| PANTHER | 1 | 441 | 441 | 5.7E-268 | – | |
| PANTHER | 1 | 441 | 441 | 5.7E-268 | ||
| PIRSF | 12 | 441 | 430 | 5.8E-195 | ||
| Gene3D | 52 | 441 | 390 | 3.4E-187 | – | |
| SUPERFAMILY | 53 | 238 | 186 | 2.24E-81 | ||
| Pfam | 78 | 237 | 160 | 2.3E-78 | ||
| ProSitePatterns | 187 | 195 | 9 | - | ||
| SUPERFAMILY | 239 | 441 | 203 | 2.08E-85 | ||
| Pfam | 251 | 429 | 179 | 1.6E-80 | ||
| ProSitePatterns | 410 | 416 | 7 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glycylpeptide N-tetradecanoyltransferase activity | Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide. | ||
| Biological process | N-terminal protein myristoylation | The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein. |
Expression pattern of LotjaGi6g1v0229700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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