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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0232100 |
| Transcript ID | LotjaGi6g1v0232100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT4G26140.1 beta-galactosidase 12; Swiss-Prot: sp|P48981|BGAL_MALDO Beta-galactosidase; TrEMBL-Plants: tr|I1MSH3|I1MSH3_SOYBN Beta-galactosidase; Found in the gene: LotjaGi6g1v0232100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:54095705..54102448) extracted from Lotus japonicus Gifu genome v1.2.
CCCACACCAAATCAAGAAACCCAATTGCAATCTACCCCACACCAAATCAAGCAACCATTTCCCAAAGCAAAAGTTTGATG ATTTCTTAACCGGTAATGTGTTGTTCCGTGAGAAGATGAGAATGAGAAAAAGAAGAGAAACGGGTCCAGGGTCCCATAAT TTCGTTCTCCAAATCTATATAAAGCACTTTGCATTCACTTCAACTCAACCATCAAACTCTCACTCTCACACCTCACCTCG TAACAAAAGAGTGAAAGACCCTCTTTCTCTCTCTCTCTCTTAGAAGGCACTGTCCACAAACAAAAACTAGAAGCCGTTTT TTCTGTCCCTCCATTCCTTTTTTTCCTCGTTATAGTTTAAAACAAGAGTACTGATGGAAGGAAAGAAAGACACCTTTTTT GGTTTCACAACAACACACAGCAGGTTCAAGAATTCTGATCATGATGGAGAGTTTAATGAGGAGGAGCAAGTTTCATGTGT TGGTGTTTATGTTGTTCTGTTCATGGTTTTGTTATGTCACTGCCTCTGTGACTTATGATCACAAAGCAATTCTGGTTGAT GGAAAGAGAAGAATTTTGATCTCTGGTTCCATCCACTACCCAAGAAGCACCCCTCAGGTACTCACTTCACTCCTTATCCA ACATGCTACATCAACTTGTTTCCTCAATCATTTCTTACATTTTTTTTTTTGTATTCATTCATAATCATGTAATGCATGCA CTAAAGGCACATTTTTTGAGGATATCAAATGTGCTTCTTATTGCAGATGTGGCCAGAGTTGATTCAAAAGGCCAAAGATG GAGGCGTTGATGTTATTCAGACCTATGTGTTTTGGAATGGACATGAACCTTCTCCTGGACATGTAATGTTAATAAATTTC CTCAAGTTCTTTATACCCTTTTATGTTTTTATTTTCCTTGTAACTCATTCTAGTTTTGTTATGATATTGAAAATTTTCAG TATTATTTTGAAGATAGATTTGATCTGGTTAAGTTCATCAAGCTAGTGCACCAAGCTGGCCTTTATGTTCATCTTCGAAT TGGTCCCTTCGTTTGTGCTGAATGGAACTTCGGGTAATGATTTTAATAATGTTCACCACTTTTATCTGTATTGAAAATTC TTAGGAAAAAAGAAAACAATTCTTTGTAATCACTCAAAGGTCACACACATGCTCTATTTTGTATTCAGGGGATTTCCTGT TTGGCTCAAGTTTGTTCCAGGTATTGCTTTCAGAACAGACAATGAGCCGTTCAAGGTTGGTGTTTTCATCAATTCTATTA TTTCTTTACATTATTGATCATAAAATTTAATGAACTTTCTAACTAAACCTCCAATTTTTTGTCATGATGTATGTAAGGCG GCTATGCAAAAGTTCACTACAAAGATTGTCAACATCATGAAATTTGAAAAATTGTTTCAAACTCAGGGTGGTCCAATAAT TTTGTCTCAGGTAAAGAAATGGTTTTCAAATATATTTTTTTTTGGTTACAAGAGGAAATCTAATGGATTTCAAATATGTT TTCTTTTAATATTATTGATTTCATTTTTCTAAGCTAATAATAATTTATGATTTTGCATTAATTTAGCATTAAGAAAACAA ACTAATTGAATTGACAGATAGAGAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCTCCTGGGAAAGCTTACACCAAA TGGGCTGCTCAAATGGCTGTAAGTCAAAATACTGGGGTCCCTTGGATTATGTGCAAGCAAGAAGATACCCCTGATCCTCT TGTAAGCTACTCTTCCTTTTTCCTCACAAAAATGGTTATCCTGTTCTGTTTTATTTATTGTGGTGTGGTGGGGTTTATTT GCAACAATGTTATGCTTATCTTAGTTAGGTTAAGGTTTTTGCTTTTTAATTTTTACTATACCATGAATTTTGCTGTTTTC CCATAACCATAAATCCATTTTGACCCCTTTTCACTATTGTATTTAACCTCTATTTGGAGGAAGGATCTATTTGTCTTCTC CACCTTTCTCTAATTCTCTTGTTGTTTTTCTGGGTTGTTCTATACTTGCATTACTTGACATGCTTTTGTCTCTTTCACTT TTTGCTTTTTAAGAAAAATAAAATCAGAGAAAGTGTCAAGACTTGATTTCAATTGATTCTTCTCCCTTGCATTTTTTTTC TCTCTGATCTGTATTTACTGACTGTTCTGTAGATTGATACTTGCAATGCATACTACTGTGAAAATTTCACCCCCAAAAAG AATTACCCAAAGATGTGGACCGAGAATTGGACTGGCTGGTAAGTCATACAAATGCTACCTTTAGGTCTGAAAGTATTTTT GTTCTGCGGCCGAAAGTTCGTTCCTCAGAAGATGCAATCTTAGAGAGACCTTTGTCATTCACCACACCCGAGTCAGAATT GCAAGAGCTATTTAATACACCAAATTATTGAGTTTTGTGTTCTGCGTTCTGTAGGTACACTGATTATGGTAGTCCAGTCC CTCGTAGACCGGCAGAAGACGTTGCATTCTCAGTTGCAAGATTCATACAAAATGGAGGCTCATTTGTTAATTACTATATG GTATGTTGGCCCTTTCTACCATAGTGAATACTTCCCTACATTGTGTGTAATTCAAACTCATGTTCTGGAGATTTTGATTT GGGTCTAATATCTTAACACTTTTTGAGTGCAGTACCATGGAGGAACGAATTTTGGCCGAACGTCTAGTGGCCTCTTCATT GCCACAAGCTATGAGTATGATGGTCCGATTGATGAATATGGTATGCAATATGGTTAATGATAGCAATTACACACATTTAA AGTTTTTCAAAACATAATGAAGCTTTTGGCTTGAGTAAAAGAAAAAAGTGATATTTTTTCTCCTAGCAAAGTGCATAAAC TCACTTGGTGCATGTTTGGAAACCTTCTACAATTGATTCTGAACCCAGAATCAATTTCGGAGAGAAGGGTCTGTCTGGTT TTCATAATTGATTCTGATGAAAGAGAAGTTGATCCAAACATGCTGACATCACATGGATAGATGCATTTACACATTTGCCT GAAGCTTTTTCAATTGTATCATCACTATATCAGGACTGGTAAATGAACCAAAATGGGGGCACTTGAGAGATTTGCACAAA GCAATAAAACAATGCGAGACGGCTTTAGTGTCTGTGGATCCGACAGTGACAAACCTTGGAAAGGATCTTGAGGTGTAGTC CATGAGCTGGTTTATGAAAAAAATAAAACCAAATTGCCACTGTTGAAAATTCACTTGTTTCTTTTTGTTAATATAATCAC AGGCACATGTTTTCAAGACAAGCTTTGGCGCTTGTGCTGCATTCCTTGCAAATTATGGCACCACATCTTCCAGAACAGTT AAATTTGGAAATGGGCAATACAACTTGCCCCCTTGGTCTATCAGTATTCTTCCTGACTGCAAAACTGTTGTTTACAACAC AGCAAGGGTAATGTGTTAATAAGTTTTGCACTTTTATTTTGTTTAACGAAGGTACATATAGTGAAAACATTTATGCTGAA ATCAGCCTGTCTGTTCTTGATAGACAGACAACTATTGTGTTTAAGTAAGCAGCTTAATTAAACACTTATGACAACATGCA TTTATTGCATAAGCGCTTATTCATAAGTTAATTTGATACATTTATGACTCAAAATAGATTATCGGTAGGTATAAGACTGT AAGCACTTATCCATATCCTAATGTGAGCAGCTTATGAAAATAAGCTCAAAAACAGCTAACTATTTACATTAGCTCTCTCA AATACTTGCATAAGCGCTTATGCTATAAGGTAAGCTCAAATAAGCTCTATCAAACAGGTTTTTGAGCAGAAACTTGTATT TACTACTCTATGCATTTTGAAGTTTGGATATTCATACCTATTTCATACAGGTAGGTGTCAAGAGCTGGGAAAAAAAGATG ACTCCAGTGAATAGCGCATTTGATTGGCTGTCCTACAATGAACAACCTGCCTCATCCAGTGAGCGTGATTCCTTCACAGC TTATGAACTTCGGGAGCAGGTCAATGTGACCTGGGATTCCACAGATTATCTGTGGTATATGACAGAGTTAGCATCTTCTA CCTTATCAAGCTTGTTAAATAATTGGAATGCCAATCTTTTGAGCCTTGAGATACTAATTTAACCTCTATTGCTCTCACTA TCTAATCAAAATTGGTATCCCTTTTTCAGTGTCAACATTGATTCTAATGAAGGTTTTATAAAGAATGGCCAATCTCCTGT TCTTACCGCATGGTCAGCTGGCCATGTTCTGCATGTTTTCGTTAATGGTCAACTTTCAGGTGATTATTCCACTATGCCTG TCTTGCTTTGCATTTTTTCATGATAAACTCGAAATCTATTTATCCATCTCCTATATAAATCCAGGAACTGTGTATGGAGG AATTGCGTTTCCTAAATTAACATTTAGTGACAATGTGAAGCTGAGGGTTAGCAACAACAAGATTTCCTTACTTAGTGTAT CCGTCGGCCTCTCGGTTAGTTTTCTCTTCTGTATTTTCATTTTTCTGCAACACCTTTAATTTGCAGATAAGTAGTATTTT AATCTTTTTTTTTTGTATTCAATTAATACCAGAATGTTGGCGTGCACTTTGAAACATGGAATGTTGGAGTGTTAGGGCCA GTCACACTGAAGGGCCTAAATGAGGGAACAAGAGATTTGTCTCGACAGAAATGGTCTTACAAGGTTTGTTATCTACTATA TTTCACTACTTACTAGCAACATTGAAAGGTTTTCTAAATGGCGGGTGTATCTTGCCTTAAAAAATCAGGAAACAAATTAT AAGTGCTGAGGTCTAGACTAAACAATGAGATAATATTAGGTAACAATATTGAAACTTGATCACCAATGAAGCAAAAGTTC ATGTAAAACTAAACTTATATGCCATTCTAGGATAGATAAGAATGCATTATATCACTGAATTTTAGGATTAATTATATGCA CCATTGAACAGACTTTAGAGCAAAAGTGTCAAGAGAATCAAAATAAGAAAGAATTTGTAGTTTTATTTTTTTTTATTTAG GAAATGTGCAGCAGTAAGGATTAACACATTTTATGTAAATTGGCAGGTTGGACTGAAAGGTGAAGCCTTGAACCTTCATT CCACTAGTGGGAGTTCCTCTGTTAAGTGGACACGAGGATCGTTATTGGCTAAAAAACAACCTTTGACATGGTACAAGGTA AGAATAAACTTTTCACAAATGATGTATTTCTGCCACTGTTATATATGATCACCTGCTTCTGCATGAACTGTGAGTCATTT TCTACTTTTATTCTGTTAGGCAACGTTTAACACGCCAGCTGGAAACGATCCGTTGGCTCTAGATATGAGTAGCATGGGAA AGGGTGAAGTATGGATAAATGGCCAGAGCATCGGTCGCCATTGGCCCGGAAATATAGCGCACGGTAGTTGTGGTAGTTGT AATTATGCTGGATATTATACTGATACAAAATGCAGGACAAATTGTGGAGAACCCTCACAGAGATGGTAAGAAACTAAGAA TTCATGCAAATTACTTTACAACAGCCAATGATATATGTACTTGAATATCATGAGAGCCTATTTTTGGTCTTTGGATAGGT ACCATATTCCACGCTCATGGTTGAATCCAAGTGGGAACTTGGTGGTTGTGTTAGAAGAATTTGGAGGTGACCCTACTGGA ATTTCTTTGGTGAAAAGAACATGAAGTGTGCTCATATGATGCATACTCAAAGGGTATTTCACCTATTCCATTTCCTTCCA TGCTTTTCTTGTTTAATTTCTTGATCCGTTCGCTGATATTCTTATTAAAATCCTCAGCTTGAATCCTTAGATATCTGCTG AATTTATGCTGCAGTTTCAGGAAAACAATTTAACTATGCTGGATTTTCTGATGTTTTCAAAAGTATCTTAATTAGGATTA CTCATAATATTAATATTATTTGCACCTTTTATTTATATCATATCTTGTTTTCTTTGGTCCCTAAACTATTATGTGAGCTT ACAGAAATCACTAGATATAGGTGATTTGGCTTTGAAAGTTTGCATTCTTTTTGTTCTGATTCTCCAATATGTTGTTATTC ATCTCTCAATATCGTCCTAGTGGTAATTTTGCAGAGCTGCATTGGCGAGCAATATTTATCTTATTACTTGTGTGTCTAGG TCACTGCCCAGCAAGGAGATGAAGCATTTTACCAAATAAATATGATTCGGATCTTACTAGTTCCAGTATAGGAAGTACTT GAAGTTCAACAATGATGCTCCATCTCTTATGATAGTTCAAGTTTACACCAAAAATACTCATGTATAGAAACAAATGTATA TTTAAAAAATTGGATTCAAAGATGCTGTATACTGTACATAGTCAAGATATTCTGCTAAATATTGCTCCAGCCTCCAAGTA TTAGAGGGCTTGTAGCAATGAAGATTGAGCCCTTACACATTTTCATAAAAATGTCAGAGTTGGATACTCAAAATGTGTTG CAGTACAGTGCACTACTACTGCTCCATTATACCAGAGATAAAATTTCCTTGTTTTTACATTGGAATTATCAATTATGTAA AAAACAAGTTGAAAGTAATAAAGGTGCTTCCAAATGGCATCTGGAATGTGTCTTATTACATCTGGAATGTTTCAATTTGA AGTTGAATTAACTTGATCAGTAACCATAACAGTCCAACCTTCCTAGTTCCTTGCTAAGAAAATATGTGAAGATAGACTTG GAATAATATCAATCAGTTCACCTC
CDS sequence (LotjaGi6g1v0232100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAGAGTTTAATGAGGAGGAGCAAGTTTCATGTGTTGGTGTTTATGTTGTTCTGTTCATGGTTTTGTTATGTCAC TGCCTCTGTGACTTATGATCACAAAGCAATTCTGGTTGATGGAAAGAGAAGAATTTTGATCTCTGGTTCCATCCACTACC CAAGAAGCACCCCTCAGATGTGGCCAGAGTTGATTCAAAAGGCCAAAGATGGAGGCGTTGATGTTATTCAGACCTATGTG TTTTGGAATGGACATGAACCTTCTCCTGGACATTATTATTTTGAAGATAGATTTGATCTGGTTAAGTTCATCAAGCTAGT GCACCAAGCTGGCCTTTATGTTCATCTTCGAATTGGTCCCTTCGTTTGTGCTGAATGGAACTTCGGGGGATTTCCTGTTT GGCTCAAGTTTGTTCCAGGTATTGCTTTCAGAACAGACAATGAGCCGTTCAAGGCGGCTATGCAAAAGTTCACTACAAAG ATTGTCAACATCATGAAATTTGAAAAATTGTTTCAAACTCAGGGTGGTCCAATAATTTTGTCTCAGATAGAGAATGAGTA TGGACCAGTGGAATGGGAAATTGGTGCTCCTGGGAAAGCTTACACCAAATGGGCTGCTCAAATGGCTGTAAGTCAAAATA CTGGGGTCCCTTGGATTATGTGCAAGCAAGAAGATACCCCTGATCCTCTTATTGATACTTGCAATGCATACTACTGTGAA AATTTCACCCCCAAAAAGAATTACCCAAAGATGTGGACCGAGAATTGGACTGGCTGGTACACTGATTATGGTAGTCCAGT CCCTCGTAGACCGGCAGAAGACGTTGCATTCTCAGTTGCAAGATTCATACAAAATGGAGGCTCATTTGTTAATTACTATA TGTACCATGGAGGAACGAATTTTGGCCGAACGTCTAGTGGCCTCTTCATTGCCACAAGCTATGAGTATGATGGTCCGATT GATGAATATGGACTGGTAAATGAACCAAAATGGGGGCACTTGAGAGATTTGCACAAAGCAATAAAACAATGCGAGACGGC TTTAGTGTCTGTGGATCCGACAGTGACAAACCTTGGAAAGGATCTTGAGGCACATGTTTTCAAGACAAGCTTTGGCGCTT GTGCTGCATTCCTTGCAAATTATGGCACCACATCTTCCAGAACAGTTAAATTTGGAAATGGGCAATACAACTTGCCCCCT TGGTCTATCAGTATTCTTCCTGACTGCAAAACTGTTGTTTACAACACAGCAAGGGTAGGTGTCAAGAGCTGGGAAAAAAA GATGACTCCAGTGAATAGCGCATTTGATTGGCTGTCCTACAATGAACAACCTGCCTCATCCAGTGAGCGTGATTCCTTCA CAGCTTATGAACTTCGGGAGCAGGTCAATGTGACCTGGGATTCCACAGATTATCTGTGGTATATGACAGATGTCAACATT GATTCTAATGAAGGTTTTATAAAGAATGGCCAATCTCCTGTTCTTACCGCATGGTCAGCTGGCCATGTTCTGCATGTTTT CGTTAATGGTCAACTTTCAGGAACTGTGTATGGAGGAATTGCGTTTCCTAAATTAACATTTAGTGACAATGTGAAGCTGA GGGTTAGCAACAACAAGATTTCCTTACTTAGTGTATCCGTCGGCCTCTCGAATGTTGGCGTGCACTTTGAAACATGGAAT GTTGGAGTGTTAGGGCCAGTCACACTGAAGGGCCTAAATGAGGGAACAAGAGATTTGTCTCGACAGAAATGGTCTTACAA GGTTGGACTGAAAGGTGAAGCCTTGAACCTTCATTCCACTAGTGGGAGTTCCTCTGTTAAGTGGACACGAGGATCGTTAT TGGCTAAAAAACAACCTTTGACATGGTACAAGGCAACGTTTAACACGCCAGCTGGAAACGATCCGTTGGCTCTAGATATG AGTAGCATGGGAAAGGGTGAAGTATGGATAAATGGCCAGAGCATCGGTCGCCATTGGCCCGGAAATATAGCGCACGGTAG TTGTGGTAGTTGTAATTATGCTGGATATTATACTGATACAAAATGCAGGACAAATTGTGGAGAACCCTCACAGAGATGGT ACCATATTCCACGCTCATGGTTGAATCCAAGTGGGAACTTGGTGGTTGTGTTAGAAGAATTTGGAGGTGACCCTACTGGA ATTTCTTTGGTGAAAAGAACATGA
Protein sequence (LotjaGi6g1v0232100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMESLMRRSKFHVLVFMLFCSWFCYVTASVTYDHKAILVDGKRRILISGSIHYPRSTPQMWPELIQKAKDGGVDVIQTYV FWNGHEPSPGHYYFEDRFDLVKFIKLVHQAGLYVHLRIGPFVCAEWNFGGFPVWLKFVPGIAFRTDNEPFKAAMQKFTTK IVNIMKFEKLFQTQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAQMAVSQNTGVPWIMCKQEDTPDPLIDTCNAYYCE NFTPKKNYPKMWTENWTGWYTDYGSPVPRRPAEDVAFSVARFIQNGGSFVNYYMYHGGTNFGRTSSGLFIATSYEYDGPI DEYGLVNEPKWGHLRDLHKAIKQCETALVSVDPTVTNLGKDLEAHVFKTSFGACAAFLANYGTTSSRTVKFGNGQYNLPP WSISILPDCKTVVYNTARVGVKSWEKKMTPVNSAFDWLSYNEQPASSSERDSFTAYELREQVNVTWDSTDYLWYMTDVNI DSNEGFIKNGQSPVLTAWSAGHVLHVFVNGQLSGTVYGGIAFPKLTFSDNVKLRVSNNKISLLSVSVGLSNVGVHFETWN VGVLGPVTLKGLNEGTRDLSRQKWSYKVGLKGEALNLHSTSGSSSVKWTRGSLLAKKQPLTWYKATFNTPAGNDPLALDM SSMGKGEVWINGQSIGRHWPGNIAHGSCGSCNYAGYYTDTKCRTNCGEPSQRWYHIPRSWLNPSGNLVVVLEEFGGDPTG ISLVKRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| PANTHER | 13 | 727 | 715 | 0.0 | ||
| PANTHER | 13 | 727 | 715 | 0.0 | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 13 | 24 | 12 | - | – | |
| Phobius | 25 | 28 | 4 | - | – | |
| Gene3D | 26 | 344 | 319 | 8.4E-110 | – | |
| SUPERFAMILY | 29 | 345 | 317 | 4.8E-103 | ||
| Phobius | 29 | 727 | 699 | - | – | |
| Pfam | 37 | 340 | 304 | 5.3E-112 | ||
| PRINTS | 40 | 57 | 18 | 4.9E-83 | ||
| PRINTS | 61 | 79 | 19 | 4.9E-83 | ||
| PRINTS | 116 | 135 | 20 | 4.9E-83 | ||
| PRINTS | 173 | 188 | 16 | 4.9E-83 | ||
| ProSitePatterns | 175 | 187 | 13 | - | ||
| PRINTS | 251 | 266 | 16 | 4.9E-83 | ||
| PRINTS | 288 | 303 | 16 | 4.9E-83 | ||
| PRINTS | 308 | 324 | 17 | 4.9E-83 | ||
| Pfam | 348 | 419 | 72 | 9.8E-26 | ||
| SUPERFAMILY | 403 | 573 | 171 | 1.03E-22 | ||
| SUPERFAMILY | 583 | 723 | 141 | 1.7E-27 | ||
| Gene3D | 590 | 727 | 138 | 2.7E-13 | ||
| PRINTS | 618 | 632 | 15 | 4.9E-83 | ||
| PRINTS | 645 | 661 | 17 | 4.9E-83 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0232100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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