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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0241400 |
| Transcript ID | LotjaGi6g1v0241400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT2G18890.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q5XF57|Y5576_ARATH Probable receptor-like serine/threonine-protein kinase At5g57670; TrEMBL-Plants: tr|A0A1J7IJ76|A0A1J7IJ76_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0241400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55319256..55322159) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGTATATTCGGAGCAACAGCTTCAAGAGGCTATTCTCCTTTGGAAGACGCAGTTTTGGAGGAGAAAACGATGATAG CAGCTTGGTGGTTCCTCCTTATGAAGAACACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTGTTCCATG CCACCAATGGCTTCAGCTCAGGTACTTGGATTTTCATAATCTCTGCGTTTGTTTTGATTGAAACACAAAACTTTTTGCTT TTTTCCTTTTTGGCATTTGAGTGATTGAATGATTTTTTCATGTTGTATCAGAAAACATGGTTGGAAAAGGAGGGTATGCA GAGGTTTACAAGGGAAGACTAGAAAGTGGTGATGAAATTGCAGTGAAGAGGCTCACAAGAACTTGCAGGGATGAGAGGAA GGAGAAGGAGTTTCTGACAGAGATTGGTACAATAGGCCATGTTTGCCATTCCAATGTTATGCCTCTTTTGGGTTGTTGTA TTGACAATGGACTTTACCTTGTTTTTGAGCTGTCCACTGTTGGCTCAGTTGCTTCTCTTATTCATGGTACATAAAAAGCT ATCATTTTCACTTGTTAAAATTGAATCTTGTCATCTGAGTTTTTTTCTTGGGGAAAAAAGGGTTTCAACTTTCAATTTAT AGTCTATGAATGTTAATGTTCCTTTGTAGATGAGAAAATGGCTCCTCTTGATTGGAAAACAAGGTACAAGATAGTTCTTG GGACAGCACGTGGTCTCCACTACTTGCACAAAGGCTGCCAGAGGAGGATAATCCATAGGGACATCAAAGCATCAAACATT CTTTTGACAGAAGATTTTGAACCACAGGTTCTTTAATCCTTACTCATATCATTGTTTCAATGAGAAGTACTTTTTTTTTA AGTGGGGTTTATTTTCTGTGATTTGACTCTGGCAGATATCCGATTTTGGACTAGCAAAGTGGCTTCCATCTCAGTGGACT CATCATTCAATAGCCCCAATAGAAGGGACATTTGGGTACATACCCCTTCTTGAATTTCCTTCAGCAACAGTTATCCATGT GGAATATTGAAACAAAAACATGGGTTTTTTTAATGGGAATTATAACGTTTGTATCAGTATATTTTTCCTCAGAATCAGTT CTGACACTTAGAAGCAGTCAATTCTGACACTTGAATTGATTTTGACTATAGAATGAAAGAATTTCCAAACATGCTAAATG TCTTATCTTCTTGTTCAGGCATTTGGCACCTGAGTACTATATGCATGGAGTTGTGGATGAAAAGACAGATGTATTTGCCT TTGGAGTGTTCTTGTTAGAAGTCATCTCTGGGAGGAAACCAGTGGATGGGTCTCACCAAAGCTTGCACACCTGGGTAGTG TCTCTCACCTTTGATCATGAAATTTGTATTATTTTATTGTGAACTTGCCTTATTCCGTAGGAAAATCCCCCATTTTGGCT TATTATAGATTTGGGCTAGACTAATGATGGTGACTATAAGAGTATATTTGGAAATATGTCTACAATTAATTTTTTGTATG GAATCAATTCTAAATAAAAGCTGAGTAGGTTTTGACTTTCATAATTGATTCTGAGTAAAAGAGAAGCTAATCAAAACATG CTAAATCATAATTGATTAGTTTATTGGAACATTTTGGTGTAAATTAAGAAGAGTGTGTTGATGACTTGAACAGGCTAAAC CAATATTGAGCAAATGGGAGATAGAAAAGTTGGTGGATCCAAGGCTTGAAGGGTGTTATGATGTGACACAGTTTAATAGA GTTGCCTTTGCTGCTTCGTTGTGCATCCGTGCATCTTCAACTTGGAGACCTACCATGAGTGAGGTAGCTCAATTACATTA TTAGCTATTTTTTACCTTGCCTTTACTTTTTGAAAAAAATCTGCATATTTACTTGTTCTGTTAGTTTAGTTTTTATCTTT TATAGTACTGTAGATAAATATAGTAGCCTCAAGCCATAAAGGGATTCAATTCAACCATGGTTTTCAAGTTTTACCTTACT ATAGTAACTAATGCTAGGTGGGCTAGTTAATTCTTCTGGTTGAGTTTGGTAGACAAGTTAAAATAGGATAAACAAGTAAC CAAGGCATGTTTGGAGAATGACTAGTGTAACTTCTACGGCATTGCATAAATATCACTTTTGATGTTCATCAATTCATATC CTATATTTATTGATACATCACTGGTCCACTTGTCAATTGTTAATAGAAACCTAGCTTTTGTTTTTTTCCTAATTTTCTTG ACTTGACCATGAAAATGATTAGTCAAGAGGATGTTCTCTGCTACCTAACTAATGTAAATATGACACCAACAATATGATTG ACAAAATTAAATTTGATCTGGATATTAAATAAAGTAAAATTATGCAGTGAATTGTTAATTTGTTACAGCTCTGGAAATTC TAAGAACTCATTGATGTATTATTGATCTTGACTTGTTAACTAAAGTGCTGCATTTAGTTCTTATCAGTTACTTGGCACTT CTTAAGATGCTAGCTGATTATGAATCATTATAAATCATTTAACAATGAATGTATATATAGTTTATATAGAGTAGAGCTTT TGGTACTTGAATGCTCAGTTATGTTTGAATATTTGTTAGCGTCAGTGTCGACGTCTATTTCTATCAATTGGGATGAAAGT GAAAAGAAAGTCTTCTGATGGATTGAGATGAAATTGCTTTCACGTTAATTCAATTGGTATTCAATCACACACTAACTTGT TTGTATCAATTGGCAGGTACTAGAGGTAATGGAAGAAGGGGAGATGGATAAAGAGAGATGGAAGATGCCAAAGGAAGAAG AAGAAGATCAGCAAGGAGAGGAATTTTGGGGTTTTGAGGATCTGGAATATGAATATGACAGTTCATTTTCAATGTCCCTT CCTGACTCCACTGGAAGTACTTAG
CDS sequence (LotjaGi6g1v0241400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTATATTCGGAGCAACAGCTTCAAGAGGCTATTCTCCTTTGGAAGACGCAGTTTTGGAGGAGAAAACGATGATAG CAGCTTGGTGGTTCCTCCTTATGAAGAACACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTGTTCCATG CCACCAATGGCTTCAGCTCAGAAAACATGGTTGGAAAAGGAGGGTATGCAGAGGTTTACAAGGGAAGACTAGAAAGTGGT GATGAAATTGCAGTGAAGAGGCTCACAAGAACTTGCAGGGATGAGAGGAAGGAGAAGGAGTTTCTGACAGAGATTGGTAC AATAGGCCATGTTTGCCATTCCAATGTTATGCCTCTTTTGGGTTGTTGTATTGACAATGGACTTTACCTTGTTTTTGAGC TGTCCACTGTTGATGAGAAAATGGCTCCTCTTGATTGGAAAACAAGGTACAAGATAGTTCTTGGGACAGCACGTGGTCTC CACTACTTGCACAAAGGCTGCCAGAGGAGGATAATCCATAGGGACATCAAAGCATCAAACATTCTTTTGACAGAAGATTT TGAACCACAGATATCCGATTTTGGACTAGCAAAGTGGCTTCCATCTCAGTGGACTCATCATTCAATAGCCCCAATAGAAG GGACATTTGGGCATTTGGCACCTGAGTACTATATGCATGGAGTTGTGGATGAAAAGACAGATGTATTTGCCTTTGGAGTG TTCTTGTTAGAAGTCATCTCTGGGAGGAAACCAGTGGATGGGTCTCACCAAAGCTTGCACACCTGGGCTAAACCAATATT GAGCAAATGGGAGATAGAAAAGTTGGTGGATCCAAGGCTTGAAGGGTGTTATGATGTGACACAGTTTAATAGAGTTGCCT TTGCTGCTTCGTTGTGCATCCGTGCATCTTCAACTTGGAGACCTACCATGAGTGAGGTACTAGAGGTAATGGAAGAAGGG GAGATGGATAAAGAGAGATGGAAGATGCCAAAGGAAGAAGAAGAAGATCAGCAAGGAGAGGAATTTTGGGGTTTTGAGGA TCTGGAATATGAATATGACAGTTCATTTTCAATGTCCCTTCCTGACTCCACTGGAAGTACTTAG
Protein sequence (LotjaGi6g1v0241400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYIRSNSFKRLFSFGRRSFGGENDDSSLVVPPYEEHPPRPSWKCFSYEELFHATNGFSSENMVGKGGYAEVYKGRLESG DEIAVKRLTRTCRDERKEKEFLTEIGTIGHVCHSNVMPLLGCCIDNGLYLVFELSTVDEKMAPLDWKTRYKIVLGTARGL HYLHKGCQRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGV FLLEVISGRKPVDGSHQSLHTWAKPILSKWEIEKLVDPRLEGCYDVTQFNRVAFAASLCIRASSTWRPTMSEVLEVMEEG EMDKERWKMPKEEEEDQQGEEFWGFEDLEYEYDSSFSMSLPDSTGST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 339 | 313 | 1.8E-144 | – | |
| PANTHER | 27 | 339 | 313 | 1.8E-144 | – | |
| Gene3D | 34 | 134 | 101 | 1.6E-26 | – | |
| SUPERFAMILY | 35 | 317 | 283 | 7.24E-67 | ||
| SMART | 58 | 317 | 260 | 3.6E-13 | ||
| ProSiteProfiles | 58 | 322 | 265 | 29.884 | ||
| Pfam | 60 | 262 | 203 | 4.9E-36 | ||
| ProSitePatterns | 64 | 86 | 23 | - | ||
| Coils | 85 | 105 | 21 | - | – | |
| Gene3D | 135 | 343 | 209 | 3.3E-55 | – | |
| ProSitePatterns | 171 | 183 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0241400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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