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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0251700 |
| Transcript ID | LotjaGi6g1v0251700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT5G49130.1 MATE efflux family protein; Swiss-Prot: sp|Q9FH21|DTX55_ARATH Protein DETOXIFICATION 55; TrEMBL-Plants: tr|A0A0S3RI52|A0A0S3RI52_PHAAN Protein DETOXIFICATION; Found in the gene: LotjaGi6g1v0251700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56382278..56385743) extracted from Lotus japonicus Gifu genome v1.2.
ACATACCCCACCCCCTCGAAACCTTATATAAAGGTGCTTTGATCTTACTTCTCAGTCTCACACCCAATTTGCTAGTGTTT CTCTCCTCACCACTCTGCCCCCTGGTCCCCTCTCACTTTGTACTTGGGAGAGTGTTTTGGGGAGAAAAAAAGACCCCCAC TATCTCATCCTGTTTCTCCTTATTATATACATTACTCTCAAACTACACACGCAAACAACAAACCTTTAAGATGCTTGCGG AGGAGAAATACCAAAAGGCATACCCGACAACTGCTGAGGTACGACACCTTACAATTCCATTAACAAATTACTTTCCAACT CTTGCATGAAATGGTTAGTATTATTGATGGAAAAAGATCGAGAGCAAAATTGTAAAATATGTTGTAGTACGTAATTGATG TATATATAATATAATAATATAATTAGTTATTTTGAAAGAGTTTTGTTCTCTAACATGTCTTTTGATCCACCAACTTTCTC TTTTTGTTTTTTTTTTCATTTTTTACTACTAAATGATGATCATATTACTCATGTTCTCTTCTATTCTCATATCTCTTTTT TGAGTGTGAGTGAATTTAGGACATGAAGAGAATGTTTTTCAAATTTTCATCCTTACAAAAAATTGAAGTATGATTTGCAT AATATATCCAATCCTTGAAGAGTGATTTTTTTTTTATAAGCTAAAGAGTGATTGTATGTACGTATACATTTCAACAATTA TCTAATTAACATATGGTTTAGTGAGGATTAAAACCGTTAAATAGATGTTAGTGAAATGCATATTTACAACTAATTTTTCT ATCCTCAAACGCTAGCTAATATTATATTCACATAGATGGAGAAAGAAATGAAAGTGGAAGATATGATGAATGATAAAGAA GAAAATAGAGAAACAATAAGAAAATATAGATGATGAAATTGGGAAGAAAAATAGTGTTATACAGAAATGAATGAAAATAC CCGACAATTGTTTAGGTACGGGGGACCTTACAACAGCATTTGAGAAGCTTCCACGTTTCCATGATTTTCAGCTCTCAACA TCATCATCACTTGTTCGTCAACTATAGTACACTACACATGTACAGTACATTATACACGTAAAAAGTTAACAGTGTGTTTT GTTTTTAATTTGTTTGCTAGGTGGTGGACGAGCTAAAGAAAATGACAGACATAGGTTTCCCAATAGCAGTCATGGGCCTC GTGGGATACCTCAAGAACATGATCTCAGTTGTGTGCATGGGAAAGTTAGGAAGCCTCGAGCTAGCAAGTGGTGCCTTAGC CATAGGCTTCACAAACATCACCGGTTACTCTGTCCTCTCCGGTCTCGCCATGGGCATGGAGCCACTCTGCACTCAAGCCT TTGGTTCGCAAAACTTCTCCTTGCTCTCTCTTACTCTGCGTAGAACAATTTTCATGTTACTACTCGTTTCTCTTCCTATC TCTCTCTTCTGGCTCAACCTCGAACCTTTCATGTTGAGCCTTCACCAGAACCCGGAGATAACAAAAGTGGCGAGCCTCTA TTGCCGGTTTTCGATCCCAGATCTCGTTGCTAACAGCTTTCTTCACCCAATTCGGATCTATTTACGTAGCAAAGGGACAA CTTGGCCCCTCATGTGGTGCACGTTGCTTTCTATTCTTTTGCACATTCCAGTGACCACTTTTTTTACATTCAAACTGCAA CTTGGTGTGCCCGGGATTGCTGTCTCTTCCTTTGTTGCCAATTTCAACACCCTTTTCTTCCTTCTCTCGTACATGCTCTA CATGCATGTCACCAAAGTGTCACTATCAGCGCCACTACTCACATCACAACCAGAAAAGTTAACCACCATTACCACCCTAG GTAAAGAATGGAGTGTGCTAATAAGGTTTTCTATTCAGAGTTGCCTTGGTGTGTGCTTGGAGTGGTGGTGGTACGAGTTC ATGACAATTCTAGCAGGTATGTACATCTTGTACTCAAATCTAATCTTTTCCAATAAAATGATTTACAGACATATATAGCA TAGTGCAAAAACCTGACAAACACACTGAGAAAAAAAAAAGTAGAGAAAAGAGAAATAATAAATATAATAAGAGAGATAGA TAAAGAATAAAAATGAAATGTATGTAGGGTGTTTACGGTTTTGGTATCTATCTAAGTACTGAATTTCTTTTGCTTATAAA ATAACCAACCGTGATACTTAGAAAGTTAGATACTCAATCCTTCAAATACACCTACAAACACTTCATTCATTTTTCTATGT CTCTTCTTATACATCATATGTCATATTTACTATTTCTTTTTCTTATCCTTATTTTTTTCTTTCTTATCTTTATTTCTGAC TCTGAATGTATGTGTGTTGTACAATTCTGATGATCACGAATACTTTCCTAAATAAATGATAATTCTTGCAGGTTATCTTC ACAACCCTCGGGTAGCTCTAGCCACTGCTGGCATAGTGATACAAACAACGTCTCTCATGTACACTTTGCCAACAGCACTA AGTGCTTCTGTGTCAACCAGAGTAGGGAACGAGCTCGGAGCGGGTCAACCGGAAAGAGCCAGCTTGTCAACCGTGGTAGC CATAGGAATGGCCCTAGCAAGCTCCATGTTGGGGTTGTTATGGACCACATTAGGTAGAGAAAAATGGGGGAGGGTGTTCA CAAGTGATAGTGAGGTGTTGTCACTAACCATGGCAGTGTTGCCTATAATTGGAGTGTGTGAGCTTGCAAACTATCCTCAA ACAACAAGCTGTGGAATTTTGAGAGGGAGTGCAAGGCCAGGTGTTGGTGCTGGAATAAACTTTTACTCATTCTACTTGGT TGGTGCCCCAGTGGCCATGTTGTTAGGGTTTGTTTGGAGATTAGGGTTGGTGGGGCTATGTTATGGGCTGTTGGCTGCCC AAATAGCATGTGTGGTCTCAGTTCTGGTTGTGGTATACAACACAGATTGGGAAAGGGAGTCATTGAAGGCAAAAAACTTG GTGGGAAATAAGAGCTTTTCATCATGTGGAGCACATGCTGATGACCAAACAGTCAAATGTGAAGAAGGTCTTGTCTTTCT CAGTGAGAACAACTCCTTAAAGTGATGTTACACCCACATTGCATGCTTGGAGGGGGATATATGCTGTATACACCGAAAAT CATGGCCTTACTTGAACAAGATTGGATGTTGAAAGTTCTATTAAATGACTATACTTTCAATTTTTTTTTTGTGATTATGC TTATGTATGTATGTATGTATATGCCTTTGCATAACCGGAATATTTTCTTGTAATCTTTTTTTCCTTGGTGGAGCTCTACC CAGCAAGTTGGTGCTGTTTGTCAACAAATGTAATAGTAGGGTTATCTGATATACTACTCATTAGTATTAGATTGATATAT TAAATTGACTATATTTTTAAAAGATGATAAAGTTTCTACCAGTACTAGAAGAACAGTTGTGTAAATGAGGTTAGGTAACG TTCGGGATAAATTATCTTAGTTCTAG
CDS sequence (LotjaGi6g1v0251700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGCGGAGGAGAAATACCAAAAGGCATACCCGACAACTGCTGAGGTGGTGGACGAGCTAAAGAAAATGACAGACAT AGGTTTCCCAATAGCAGTCATGGGCCTCGTGGGATACCTCAAGAACATGATCTCAGTTGTGTGCATGGGAAAGTTAGGAA GCCTCGAGCTAGCAAGTGGTGCCTTAGCCATAGGCTTCACAAACATCACCGGTTACTCTGTCCTCTCCGGTCTCGCCATG GGCATGGAGCCACTCTGCACTCAAGCCTTTGGTTCGCAAAACTTCTCCTTGCTCTCTCTTACTCTGCGTAGAACAATTTT CATGTTACTACTCGTTTCTCTTCCTATCTCTCTCTTCTGGCTCAACCTCGAACCTTTCATGTTGAGCCTTCACCAGAACC CGGAGATAACAAAAGTGGCGAGCCTCTATTGCCGGTTTTCGATCCCAGATCTCGTTGCTAACAGCTTTCTTCACCCAATT CGGATCTATTTACGTAGCAAAGGGACAACTTGGCCCCTCATGTGGTGCACGTTGCTTTCTATTCTTTTGCACATTCCAGT GACCACTTTTTTTACATTCAAACTGCAACTTGGTGTGCCCGGGATTGCTGTCTCTTCCTTTGTTGCCAATTTCAACACCC TTTTCTTCCTTCTCTCGTACATGCTCTACATGCATGTCACCAAAGTGTCACTATCAGCGCCACTACTCACATCACAACCA GAAAAGTTAACCACCATTACCACCCTAGGTAAAGAATGGAGTGTGCTAATAAGGTTTTCTATTCAGAGTTGCCTTGGTGT GTGCTTGGAGTGGTGGTGGTACGAGTTCATGACAATTCTAGCAGGTTATCTTCACAACCCTCGGGTAGCTCTAGCCACTG CTGGCATAGTGATACAAACAACGTCTCTCATGTACACTTTGCCAACAGCACTAAGTGCTTCTGTGTCAACCAGAGTAGGG AACGAGCTCGGAGCGGGTCAACCGGAAAGAGCCAGCTTGTCAACCGTGGTAGCCATAGGAATGGCCCTAGCAAGCTCCAT GTTGGGGTTGTTATGGACCACATTAGGTAGAGAAAAATGGGGGAGGGTGTTCACAAGTGATAGTGAGGTGTTGTCACTAA CCATGGCAGTGTTGCCTATAATTGGAGTGTGTGAGCTTGCAAACTATCCTCAAACAACAAGCTGTGGAATTTTGAGAGGG AGTGCAAGGCCAGGTGTTGGTGCTGGAATAAACTTTTACTCATTCTACTTGGTTGGTGCCCCAGTGGCCATGTTGTTAGG GTTTGTTTGGAGATTAGGGTTGGTGGGGCTATGTTATGGGCTGTTGGCTGCCCAAATAGCATGTGTGGTCTCAGTTCTGG TTGTGGTATACAACACAGATTGGGAAAGGGAGTCATTGAAGGCAAAAAACTTGGTGGGAAATAAGAGCTTTTCATCATGT GGAGCACATGCTGATGACCAAACAGTCAAATGTGAAGAAGGTCTTGTCTTTCTCAGTGAGAACAACTCCTTAAAGTGA
Protein sequence (LotjaGi6g1v0251700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLAEEKYQKAYPTTAEVVDELKKMTDIGFPIAVMGLVGYLKNMISVVCMGKLGSLELASGALAIGFTNITGYSVLSGLAM GMEPLCTQAFGSQNFSLLSLTLRRTIFMLLLVSLPISLFWLNLEPFMLSLHQNPEITKVASLYCRFSIPDLVANSFLHPI RIYLRSKGTTWPLMWCTLLSILLHIPVTTFFTFKLQLGVPGIAVSSFVANFNTLFFLLSYMLYMHVTKVSLSAPLLTSQP EKLTTITTLGKEWSVLIRFSIQSCLGVCLEWWWYEFMTILAGYLHNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVG NELGAGQPERASLSTVVAIGMALASSMLGLLWTTLGREKWGRVFTSDSEVLSLTMAVLPIIGVCELANYPQTTSCGILRG SARPGVGAGINFYSFYLVGAPVAMLLGFVWRLGLVGLCYGLLAAQIACVVSVLVVVYNTDWERESLKAKNLVGNKSFSSC GAHADDQTVKCEEGLVFLSENNSLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 11 | 472 | 462 | 3.3E-243 | – | |
| PANTHER | 11 | 472 | 462 | 3.3E-243 | – | |
| CDD | 20 | 467 | 448 | 1.85191E-149 | – | |
| Phobius | 27 | 49 | 23 | - | – | |
| TMHMM | 27 | 46 | 20 | - | – | |
| Pfam | 30 | 188 | 159 | 2.2E-31 | ||
| TIGRFAM | 37 | 437 | 401 | 9.6E-57 | ||
| Phobius | 50 | 60 | 11 | - | – | |
| TMHMM | 59 | 81 | 23 | - | – | |
| Phobius | 61 | 82 | 22 | - | – | |
| Phobius | 83 | 101 | 19 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 102 | 123 | 22 | - | – | |
| Phobius | 124 | 170 | 47 | - | – | |
| Phobius | 171 | 193 | 23 | - | – | |
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 194 | 198 | 5 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 199 | 223 | 25 | - | – | |
| Phobius | 224 | 254 | 31 | - | – | |
| Phobius | 255 | 274 | 20 | - | – | |
| TMHMM | 255 | 274 | 20 | - | – | |
| Pfam | 264 | 424 | 161 | 2.3E-31 | ||
| Phobius | 275 | 288 | 14 | - | – | |
| TMHMM | 289 | 311 | 23 | - | – | |
| Phobius | 289 | 311 | 23 | - | – | |
| Phobius | 312 | 330 | 19 | - | – | |
| Phobius | 331 | 350 | 20 | - | – | |
| TMHMM | 333 | 355 | 23 | - | – | |
| Phobius | 351 | 369 | 19 | - | – | |
| TMHMM | 370 | 387 | 18 | - | – | |
| Phobius | 370 | 389 | 20 | - | – | |
| Phobius | 390 | 409 | 20 | - | – | |
| TMHMM | 408 | 430 | 23 | - | – | |
| Phobius | 410 | 428 | 19 | - | – | |
| Phobius | 429 | 433 | 5 | - | – | |
| Phobius | 434 | 457 | 24 | - | – | |
| TMHMM | 435 | 457 | 23 | - | – | |
| Phobius | 458 | 505 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0251700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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