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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0268100 |
| Transcript ID | LotjaGi6g1v0268100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Fatty acid 2-hydroxylase-like protein; TAIR: AT2G34770.1 fatty acid hydroxylase 1; Swiss-Prot: sp|O48916|FAH1_ARATH Dihydroceramide fatty acyl 2-hydroxylase FAH1; TrEMBL-Plants: tr|A0A072V5H1|A0A072V5H1_MEDTR Fatty acid 2-hydroxylase-like protein; Found in the gene: LotjaGi6g1v0268100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58291688..58297779) extracted from Lotus japonicus Gifu genome v1.2.
AAGTGATTGGGCTGATTTGAGACTATCTCACATCACCACATTGGCCTATCGAGATTCACCAGGCCCCACCCGAAAAGACT CAATCTACCCTCACCTCCACTAAGATCTCGCCACGTTACCAAACCACATGAACCTCAACGGACCAGATCATCCCTCAGCA CCAGCCTGTCAACTGCAAAAATCCAACGCAACGAGAGAATCATTCCTTGATTCCATAGATCAAACGAACGGCCCAGATCA TCCCTCACACTCCTCCAAAAACACTCAATCCCCCAAACCCAACAACAACACTATCCCTTTTCCTATCGGAACGGTGCGGC GCAGCGCGGCGCGGTGCGGTGCGGTGCGGTGCTGTACACTCTCCGGTTGCCAGAAACCACCGCCGCTTCATTTTCGATTC CGATCTCACTGCATTGGCTTCTCGCTACTCTTCGGTTAGTTCACTGAAGCTTATAGATCTGTTTTCGCTCTCGTTTCGCC ATTGCGAGTCTGCGTTTTCTGCATGTTAGTTCGCTAAACACGAATTTCAACTTTGCCTGTTTCGTTTCTAGCGATTTTAG ATGTTTCTTCACTTCAATTCGCTGCTCAATTGAATTAGGCTCCGTTTGGGAAAACAACTTTATGATCATAAGCCACCATA AGCGATTATGACGAAGCGCTTGTTCAAATAAATTGATAATAAACTATATATATATATATATATATATATATATATAAGCA TAAGCTCATTTTCATAAGCTGTTTGTATAGCGCTTATGCTATCAGATAAGCTCAAATAAGCTCTCCCAAACGGGGCCTTA GTCTATGCGGACTAGTTGGCGTGACGCCATTGATGATGATATCTGGAAGTAGTAATGATGAGGGTTTAGGAAAAGAAAAT TTCAATTCAATTTAATTTTAGGAAAGCTTAGTTTTCTTTGCCTTTTTGTTTTTTTGTCATTGTATGCTGTTGGTGCATGT GAATTGTGAAATTATTGCTTACTTTTTCTTTGATGTTGTTGATGGCAATGAGTTTGGTATTTTTTTTTAGTTATTGAAAA CGACTATGGTCTTTTCTGGTAGTTGTAAGGGTGTTATGGGACCAAAGCAATGAGAAGCCAGTGCCACTACATAAGCTTTG GCATGAAGCAATGAGAACTTGAACTTTTTTGACAATGTAGCATTGTTAACCAATTAGATTATTATTTTTTCCTTGTTGTT ATTGACTACACATGTTTCTAACTTTTTGCTACGAGAAAAGTTAAAATTTGATGACATTAGATTAGAAAGGCATAAATAGA CTGATATTGGTTACACTTTCCTAGCCCATGTGTTGCTTTATATCATGCTTTTTCAGCATTGTGGTTTCTATTATTGAACT TGCTTCTTGCTGAGTGTTAACACTTATTTTCTTTGGCTTCAACTTCAGTCCCAGGATGGTTGCGCAGAACTTCGTAGTTG ATTTGAGCAAGCCCCTTGTTTTCCAGGTACAGGGACAACCCTTCAAGTTCTTATTTCAAACTACATGCCCTGTTTTTGCA GTATAATTAGAATGTCATATAGGTTTCTTTCTGTTTATGGGTTAACATAGGTTGATATAACAAGTGGATGCTTATAAGTT GTACCCTAAGTAATCGTTGAGTGAACCTGACCAATTTTTTTAATTTCTATAGGTTGGACATCTTGGAGAAGCTTATCAAG AGTGGGTTCACCAGCCCATTGTTAGCAAGGAAGGCCCCCGTTTCTTTCAAAATGATATTCTGGAGGTATAGACTACAACT ACAAGAACGAAAGTCTTGCTACACTCAGTGGTGTTGGTTAGACAGAGCAATTGATGCCATGGGCATCATCAAAATCCAAG TTTCTAGTAAAACCATTTAGATAATGGTCTTTTTATTGTTTCTCCAAATTTTTTCTTTGCTACCTCCTCTACTTTTTATT ATGACTATTTTCCAATTCATCTACTTTTCTCATGGAGCTTTTATTGATCTTCTTCTCACATGACTAAACTTCATGAGGCG AGTTTCAGTTTTCTTGCCCTAAATTGTTTATAATCTAAGTTTTTCCCTGGCTATTCACTCAATTTTTTTTTCACGTATTT ATAATTTTCTACTCATTCACCTGTGCATTACCATCACCAATACATTTATTTTTTGCTCTTGTCCACCCATCACATCCAAC ATTTACTGCCATAGCGGCTAGCGCAATGCTAGTAATATAGCTTTCCGATAAATTTTGATGGGCATGTTGCAACTAATTGG GATTATGGATCTATCTTCAATTCTTCTATCAATCGACCACATTAAAAAAATTTAAATTCTATGTTCTGATAATTCATTTT AAGATATGAAGTGTTCTTGACTTGTTATTACTTGGAACAGTTCTTGACACTCACAGTCTGGTGGGCAATTCCTGTCATTT GGTTGCCAGTTGTATGTTGGCTTGTATATAACTCTATTCAAAGGGGCCTCAATTGTCCTCATGCAGCTCTAATGGTGGTT CTTGGCATTTTCGTGTGGTCATTGCTGGAATACTCATTGCACCGTTTTCTTTTCCACATTAAAACAAAAACCTACTGGTT AGATCTCTCTCTCCCTCTCCCTCTCCCTCTCTCTTGCCTTTTTTTCCACATAACAAAATCATATATTAATTTTGAGAAAT GCTACCCAACCAAACATCCTCTCCAACAAGCTCTTTTCAACACATATTATTTGATAAAATTCGCGTGGTTCCACTGAGGG TGGATCTTACCAAATGGGGAAGTGAAGCTCCAAATGATTTAGTGGGTCCCGTATCAATTTCACATAATGATAAAGTGTGT ATTGGAAAAAGCTTGTTGCTAGCCATATTCGATAGTTTTTGCTTGTAGTTGTCTTTTACCATGTCTGCTTAGAGTAACTA CTTATTGATTTGGGTAACACTGAAAGCTTGTGTCCTTTTTTGTTCTTTTTTTGGTTAACTATTGGTTCAGGGGAAATACC ATGCATTATCTTCTCCATGGCTGCCACCATAAGCATCCCATGGATGGCTTGAGACTTGTTTTCCCCCCTACTGCAACGGC TATATTATTGTTCCCGGTATCTTCTATGCCATATTATATACTGCTCTCTTTCATAATTTATTTGCTGCTCAGAGAATTAT GGGATTTTAAATTTCTTCTAAGTCAGAAAGTGTACCTTTTCTTTTTTATCTTTCTTCTCTGTTTGAATAGAAACTTGGCT TGCTTAAGTTTTTTGGTCCTTTTATTGTCACAGTAACAACCTATTCATGTTAGTCATTCTTTTTCAGTTTGTTCATTTGA ATAGAAACTTGGTTTGAATTTATTTTTAGTTTTATGTTTGAAAAGGATAGTTCTTCCCCAAATAATTATTTGACTTGTTT ATACTCTCATTCCGTGATAGGAGCTTAATAAAATCAAAGAAATGTTGCTTCTGGATTGCTTTGCTGAAGTCACATAAGAG GCTTCAGCTTTGTAGACCAAAATTTGTAGCTTTCTTTCGAAAATGGCTAGAATACTTTTTGACATTTTATAAAATTATTT GATTAATCATCAATATAGATATGTCAGGAGGATTGGTAAGATCTAGAGATAATATGTGTACACACCATGGTTTAAGGTTC CTTGAAGTGATGTTGGTGTTTTTGTCTGCTGTGTCATCCAGTTCTGGAACGTGGTGAAGCTCATGTCCACCCCTTCAACT GCGCCTGCTTTACTTGGAGGTGGCTTATTGGGTTATGTAATGTATGATTGCACACATTATTACTTGCACCATGCTCAGCC GAAGACTGAAATTCCCCGAAACCTCAAGGTACAGACATTTCCCTCCTTTAACTGTGGATGGCAATTAAATTACCATTTAT TGCTCCAATGCTGCTAAGAAAAACCATTTTGTTCTATATCACTGATTAGACAAATAGTTGTGTAGTTTACCTGTTATAGC TGATAGTATTTTATTTCAGTAGAAACTGAATGGCATTAAACTGAGATACAGTGAATGTAGAGGCATTTCCCCCCTAAATT AATATGCTTATCAGCCTCTTGAAATATGGGTCCCAAAACATGACAGTATTTTGGGGAAGGAATTTGAATTTGGTCTTCCT ATTCTTGGAAACTAGTTTAATTTTCACAGATTCTGCTAGGGACCCTAAAATCCTGGATAGAAGTTTGTATCTTTTTTTTT AATATCTGAATTCTAAACATGATATTGTCATAATCCCAAGGAAAACTGAAGGATTTAAATCACTTGTAAAGGGCAGATTT GAAAGTCTCTGTACTATCCCTGTTATTCCTTTTGCACCTTTCTGTGTATGTAACATATGCTAGGATGAACCTAGAAAAAC ATATACTAGGATGGCTTCCATCCATACGAGAGCAAATCATGTGTCCCTTATTTTTCTGCAGAAGTACCACTTGAATCATC ACTTTCGGATTCAGGACAAAGGCTTTGGGATCACTTCATCACTATGGGATAAAGTTTTTGGAACACTTCCTCAATCAAAA GCGGAAGCCAAAAGTATGTAAGTTAGTTACTGTCGAGGTGTAGCATATGTTGGTTGGGTTCAAGATTTCCTGTTTTGTTT ATCTAATTCATTTTGCTCCCCAATAAATGTTTGTGGGGGTTTGCGTTCTATCTTTAGTCAGTTTTATGGTGCCAAAGTTC AACAATTGAACATTGTCTAGAAATTGATATCTTGTATCAGATTTATGGTGGGAATCTCATCTCCTTGTGAATATTCCTTT CTGCTGTAACTTTATCACCAATATGATTGTGATACATAAAAAAGCCTAATATAAAATTAAAGAACTTAACTATATTTTTG TCACATGAAAAATATTAAAAACAAGAAGCCTACAATTACTGTAACTTCTTTGGGTTTTTTTTTGGCGCGCATCAAGTGTG TCCTCTAGCCAATAACAAGAGGCCTAGAGATCAATGAAATGGGCTTTGCTCCTTCTAGTAATTCAGTTTTCAAAACATGA CCAAAGTTCGAACCTTGTGTCTGCTGGTGGAGGTGATAAAGAAAGAGAAGAAAATAAGAAGATAGCAAAGTTTCAAATCG TCTGATTCGTCCAGAATGTTCAGATGCCACTCTTAAGATTCCTCCATAAAAACGTCTTGATCCGATGAGGTCCATTCCAA CGCCACACTAACGAAATTACGAAAGTCAATGAAATCTTAAGGAAAATGGAGAAAGATAAGATGTAAAAAATGGTTTTTGA GCTTTTGGTTGGAGTTTATGGATCGATCAAAGAGATTGGGCTTTTTTGAGCCGTGGAAAAATGAGGGAATAAATTTGGAT ATTGATGAAGGGAAAGAGAGAAATGGGCTAAAAAAATGGTTTTTTTTTCTCTCTCATGGTGAAGGGGAGAAGATATATTT TTTTTTCATGAAGACCCTCTCCTATTTTGTGCCGAAGGAATCTTCCTAAAATATCCGTACCTCCTACATTTATTCAGAAA TTGTCTCCCATTTTGCTGTGATCCGCCTGTCCAATGTAGTGCTGTGTGTGTCCTTGTTGTGGGTAGGTGTGTGTGAGGGA GAGAAAGGAATAAAAAGGACAATAGTGACTGGATGAAGAGAGTGATAAGAGTGGTGCCTTAGCTTAACAACATTGATATA ATGATCTACACGTTTTCTCTTCTATAACAATTCCAAATCTTTTTTTCAAGATTAAAAAGACTATAGAGTCAAATGATGAC AACGAAGTGAAATTATGTTAGATCGAAGAAAACTTCCATACACGATAGTGATAGTGATGATCATCTCTAAACGCTTCACT AGCTAATGCATCTGCAACCATATTACAATCTCTAGGAATATGAGACAACAACAGAACAATCAAGTTGCAATCCACCATTC CCCCAACTCAGTGTTTCACATCACACAACTAATAAACGATAAAATAATGTTTACTCATAAGAATATACACTAATCTTCAA ATTATCAGAATCATAATTCACTTTCCTATAGCTCAAGTTTCAAACATGTTGTAAATCAACCTTTATCCCGTGCTCAACTT CTCGGCATCCCCATTCCTATAAGTCTATAACTTTAGGACACCTATATTCTATAAAAAAAAATACTTTTAAAAATATTTTA AAGTCAAATATT
CDS sequence (LotjaGi6g1v0268100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGCGCAGAACTTCGTAGTTGATTTGAGCAAGCCCCTTGTTTTCCAGGTTGGACATCTTGGAGAAGCTTATCAAGA GTGGGTTCACCAGCCCATTGTTAGCAAGGAAGGCCCCCGTTTCTTTCAAAATGATATTCTGGAGTTCTTGACACTCACAG TCTGGTGGGCAATTCCTGTCATTTGGTTGCCAGTTGTATGTTGGCTTGTATATAACTCTATTCAAAGGGGCCTCAATTGT CCTCATGCAGCTCTAATGGTGGTTCTTGGCATTTTCGTGTGGTCATTGCTGGAATACTCATTGCACCGTTTTCTTTTCCA CATTAAAACAAAAACCTACTGGGGAAATACCATGCATTATCTTCTCCATGGCTGCCACCATAAGCATCCCATGGATGGCT TGAGACTTGTTTTCCCCCCTACTGCAACGGCTATATTATTGTTCCCGTTCTGGAACGTGGTGAAGCTCATGTCCACCCCT TCAACTGCGCCTGCTTTACTTGGAGGTGGCTTATTGGGTTATGTAATGTATGATTGCACACATTATTACTTGCACCATGC TCAGCCGAAGACTGAAATTCCCCGAAACCTCAAGAAGTACCACTTGAATCATCACTTTCGGATTCAGGACAAAGGCTTTG GGATCACTTCATCACTATGGGATAAAGTTTTTGGAACACTTCCTCAATCAAAAGCGGAAGCCAAAAGTATGTAA
Protein sequence (LotjaGi6g1v0268100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVAQNFVVDLSKPLVFQVGHLGEAYQEWVHQPIVSKEGPRFFQNDILEFLTLTVWWAIPVIWLPVVCWLVYNSIQRGLNC PHAALMVVLGIFVWSLLEYSLHRFLFHIKTKTYWGNTMHYLLHGCHHKHPMDGLRLVFPPTATAILLFPFWNVVKLMSTP STAPALLGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDKGFGITSSLWDKVFGTLPQSKAEAKSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 236 | 236 | 5.4E-132 | – | |
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 1 | 236 | 236 | 5.4E-132 | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Phobius | 49 | 71 | 23 | - | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 83 | 101 | 19 | - | – | |
| Pfam | 87 | 226 | 140 | 9.5E-16 | ||
| Phobius | 102 | 135 | 34 | - | – | |
| Phobius | 136 | 154 | 19 | - | – | |
| TMHMM | 136 | 154 | 19 | - | – | |
| Phobius | 155 | 165 | 11 | - | – | |
| Phobius | 166 | 184 | 19 | - | – | |
| Phobius | 185 | 237 | 53 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Biological process | Lipid biosynthetic process | The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0268100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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