Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0270700 |
| Transcript ID | LotjaGi6g1v0270700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CoA ligase; TAIR: AT1G30520.1 acyl-activating enzyme 14; Swiss-Prot: sp|Q8VYJ1|MENE_ARATH 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal; TrEMBL-Plants: tr|A0A151T610|A0A151T610_CAJCA 2-succinylbenzoate--CoA ligase; Found in the gene: LotjaGi6g1v0270700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58508147..58513493) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTGCGTTTGAAGCAGATAAGAAAGCGAAGACATGGTTTTTATTGTCTGAGCTAACACTAACACTCAAAAGCTTCAAA CCACCACTTTCAATGGCTAGCTACTCCCGCCCTCACATTTGCCAATGTCTGAGTCAACTACTAACTTTCCGGCGACATTT TCCGGTGACAATCGCCGGTCACCGCCGCAAGACCGGGCAACAATTGGTGGAGGAAGTTTCATCCCTTGCACAAGGCCTTC TCCAGCTAGGAGTCACACCTGGTGATGTAGTCGCCATCTCTGCTTTCAACAAGTACCCTTTGTTCCTTCTTCTGTCATGC ATTTCTCTGTTTTCCTTTTTCCAAAATCAATTCTGAAATTCAGAAGCTACTCGTAGAAACTTCTCCATGTAGTTGACTCT GGCGAGTTTCCAAACATGCACTAACACTTCATTTATTGCTAATTCATCTATGATTTTATGAATGATAGATTGATTGATTT TATTCATTTTTACAGTGATTGGTATGTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTCAACT ATCGCTGGGTAAATTTGCTGTGAGCTTCACTGCTTAATTTAGTATTGTCTTTTACATGGTTTTTTTTCCCTAAGCTCTCT CATAAAACAATGTTCATGCTAATTACTATGGCATTTCATGGTTATATTTAACTTTTTGTTCTTATTTCATCAAGATTGTG TGTGCTTTCACACAATCTATTTCTTAATGTTATGCTTTAGATCAATTTTCTCCTCCTGCAGAGTTTTGAGGAGGCAAGAT TTGCAATGACTGCAGTGAAGCCAGTGCTGTTAGTCATTGATGAGAGTTCCTACTCATGGTACTTAAAACTCCACCAAAAT GATATCCCATCTCTGAGGTGGCATGTTTTGTTGGATTCCCCTTCACCGGATTTTACAAACAAGTGGAATGGTAGGAACAT TGCTGGATATTTGTATAGCAGTGTGACAATTATAGATGAAACCTTGTTTTTTGGGATTGAATAGTGTTCATAACTTATTG CTCTTACTGTTTTTCAGGGTTAACTCCAGAAATGATTAAGAAGCATCATGTAAAGCCTCTAGAATTTGATTACTCCTGGG CACCTGAAGGCGCTGTTATAATATGCTTCACCTCAGGTTCAAGATTCTAAACCATTTATAGGAAAATAAGGATTTATGAA AGTAACTAACACAATGCAATACATGTTCCATCAGACAGTTGCGAACTTTTTGAACTAAGTGGAATTTTACTTTAAAGCTT GTTTTATTTATGAATTGTGAATAAGTGGATGGAGCTGATTAACTTTTTGAGGCACTAATTAATTTTAAGAATACCTAATT GAAAAAGAGCAGTAAGATTGGAGGGAGGTTGCGGTTTGATCTGTATATCCATTTTGATTTTAGTTCTAGGAAAATAAATA TTCAATTAAAAGTTCCAAAATTTCTGTTTACAAGGCAGTTGCAGATAAGTAGGAATTTGACAAACAAATGGACTTCTATA GATATTTTACTCACTGGATGAGTACTCTGTCAGCTCCATTGGCAAGACTTTTTAGTATTATAGCATATTTGGATCAGTTT GTTTTTTCTAAGAATCAATTGTGGCACCCAAAAACTTCTCCTAAGAATTGATTCTAGCTTTAGAATCAATTGTAGAAGAA TTTTCAAACATGTGCTTTATATTGTGCTATTCTTTAAATATTACTCTAGGGAATTTACCTAATAAAATATATCCTTTTTT ATTTCCTGAAAGTATTATGTTCTTGACTCTAGGAACCACAGGAAAGCCCAAGGGAGTGACCATAAGCCATGGAGCTTTGA TCATACAATCTCTAGCCAAGATTGCCATTGTTGGGTATAGTGAGGATGATGTATGCTATTTTATGTTATTGGTTATGAAA GGTTACCATTATATCAGCCCATGAGGTTGTCAATATCAACTGTTAAGAAGTTTTTATATACTCGCAAGTTACATGATAAA TCAAGCTATGTAATGATTTAGTTCTTCATAGTTTTTCCATTTGCTCCATAACAGGTCTATCTGCATACTGCTCCATTATG CCATATTGGTGGCTTGTCATCAGCCATGGCCATGCTTATGGCTGGAGGATGCCATGTATTGATGCCCAAGTTTGATGCTA AATCAGCAGTTGGTGCCATAGAGCAATATAAAGTGACATCTTTTATCACAGTTCCTGCAATAATGGCCAGTCTGATGTCA ACATTAAGGTATATTCCAGTGTCAAATAGGAGCAAAAATTTATCCTTTTCTGTAACAAAAATGTTGTTGAGATGTCTCAC ATTGAATAGAGGAGTTTATAAATGGTTTAGCAACCCTCACTTCTAAGCTAGCTTTTAGGGTAGAGTTAGGCCTAACCTTA ATTCCAATATGGTATCAGTTTCTATCATGGATCCGTTTGTTGGAGACCACCCGTATATGGTCCAAACTTAGGCGTGAAAA GGTGTGTTGAGAAGTCTCACATTGACTAGAGAGATATGGCCAAATAAGTGTTTATAAATCTAATAAATGTCATGTTATCT TCTCACCAAAGGTGAAAAAGAAGAACCAGAGTTTTGGAAATTGGAATATATTGTTTTACCACTATTCTGAAGTCTTGATT TAATGTATGATATTTTTAGGCTCAAAGAAACATGGAAAGGGGGAGATACTGTGAAGAAAATACTTAATGGGGGTGGAAGC CTCTCACTTGAGCTAATCAAAGACAGTAGCATATTCTTCCATAAAGCTAAGCTCGTTTCAGCTTATGGTAGGTCTCTCTT AACCCAATATGGTAGCAGAAAACTTATATGCTAAAATCAAATATTAGAAGTCAACATGAAGTCCTTACTTGAATATTAAG ACAAGCCACTACTTAATGAAAACCTCAATCATTGGAATCTATTAGCCTAACAAAAGAAAAAATAAAACCTAAATAACTGT TAAGTCTACATTGAAGAATATGTGCTTCTTTCATTTTCTCTCTTTAAAATATTGATTTTTTGACCATGAATAGCTCACAA GTCTCTCACTTTTTCCTTTTTACATGAGTCCTGCTAAGGGCACTGGTTAAGGGATCAAAAAATAGTTTTTTTGTTGTTGA AAGCTATAGTACTCAATGCATTCATAACTTTGAACACTTTCCAAGAAAAAAAATTCCACTTTTGATTCTTTAACCAGTGC CCTTCTTCTACATTTTATGTTTACTCAACACATAAAGGCCACTATAGTTTGACCTTTTTAAATTTCCTTAGGTCCATAAG TTCACTATTATGATCTTATTGTCTATAATATTTTTCATTTATCAAAAGGGATGACAGAGGCATGTTCTTCATTGACATTC TTGACACTGCATGATCCAATTCACAAACCCACAAGCCAGGCCCTTCAAACATTTGGTGAGACGGGATCCGATGTCATTCA CCAGCCACAAGGGGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAACTGAAAATATGTGCAGATTCCTCTGGTCACAGTG GAAAAATTTTAACTAGAGGACCACATTTAATGCTCAGGTATTGGGAACAAATCCTCACAACCCCATTGAACCAGAGGAAT GAAGTCTGGCTTGACACAGGTGACATTGGATCAATTGATTGTTTTGGCAATTTGTGGCTCCTTGGACGAACAAATGGCCG TATCAAAAGTGGTGGGGAGAACATTTACCCTGAAGAGGTAATAAAAGTGTCAATAGAACCCGTTTGCTTAGTGGATATTT AAATCAGCGTTGTCAAAATTGATTTTGGATAGAATTGAATTGATTACAGTAAAAGTGATTTAAACTGAGTTGATAGTGAA GTGGTTTATGTTTGATGCAATTATGGGAAAAGTGATTACTATAAGGTAATGTTTACAAAATTCAGTTATCAAACCCCAAA TTGATTTTCAACTGGATAAGCTACTCTCTATGGCTTCTCCGCATAATTGATTTTTCGACTAAAATCAGTTTTCTAAGTCA CCAAATATCTGTATAACCTGCTAAAAGTGACTCTGGTCAATAAGATTTGATTATATGGCTCCCAAATGTGGAAGCAAACA TGCTCTTAATCATGAAGAAGGAATTGAGACCAAGAGAATATGCTGCTTTATTAGAATGTTTTGTCCTTCAAAAGGAACCC AAAAGTAAAACAAAATAATCATGTTAATGTAGCACTAGACATTTCTACTTAGGGTGTACATTTCTAATTATGTCAAGTTC TTGTCTTTACTTAGTTTATGATATTTAATAATCCAAGGAAGTGTGATTATGCTATTTGTCTGAAGTAGGTTGAGGCCATT CTACTAGAACATCCAGGCATTGCTAGTGTTGTTATTGTCGGAATCCCAGATGCTTATCTGACAGAAATGGTAGCAGCTTG TATACAACTGAGAGAAAATTGGCAATGGATCGAGCACTCTAATTCAATTGAAGAGTTTCATCTAACTAGCTTGAATCTCC AGCAACACTGTATGGAAAATAATTTAAGCAGGTATGTCTCCAAAGTTCACGTTTGTTAAGCATGTAGGCATGTTGCAGTC GTCTAGGTTATGTTTGGATTTTGCTGACACCATTGCAAAGAGATGTTGACACATAGTTCAAGAGCAAAAGATGAACAAAA TTTTCTTACTAGTTGAGATGAAAATTCGTTCGCATTGCACTCAGGTATCATGCTTATAGTGATTATGTGTTTTGAATCTC CTTTCAGGTTCAAGATACCGAGGATGTTTATTGAATGGACGAAGCCTTTTCCACTTACTACCACGGGAAAAATAAGAAGA GACCAATTACAAAAGGAAGTTTTGTCTCAGCTACAATCTTTGCACAGTAACCTTTGAATATATCAAGGCCACAGTGCACA ACATTGCCCTCATCCTCCAAGCTTCCAAGAACAGGCTGCTGTGGAATTCAGACACGGTAGAGTCAAAAATTTTTGTTGGT ATTCAACCACACAATATTCAACCACACAATATTAAACAACATGTTTGCTATCAGAATGTAGGCCAACAAGTAATTCATCA CTTATGTGCCAAGATACAAGCACATCCAAACAATGAAAATCTGTTTGTTGATCCGAGTATTCCCAATAAATATGTCTATA ATGTGAAGAATTCTGCCAAAATGGGTTATTTGGCACACTTGAAAAAAATAATAATTTAAATTAGCCATATCTTATTCGTC AATGTAGCATGTTAACAAATAAGTTGATTGTACATACCATGTGGTTCAAAATGAACATTAAGCGCTGTTGGTGATGGAAT TGGAGTTGTAGGAGAAGTAAGTATGAGCGGCGTCAAATTCACTCTCTACGTTTGTTAGAAATCCCCG
CDS sequence (LotjaGi6g1v0270700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGCTACTCCCGCCCTCACATTTGCCAATGTCTGAGTCAACTACTAACTTTCCGGCGACATTTTCCGGTGACAAT CGCCGGTCACCGCCGCAAGACCGGGCAACAATTGGTGGAGGAAGTTTCATCCCTTGCACAAGGCCTTCTCCAGCTAGGAG TCACACCTGGTGATGTAGTCGCCATCTCTGCTTTCAACAATGATTGGTATGTGGAGTGGTTATTAGCCATTGCATTTGTT GGAGGAATAGCTGCTCCTCTCAACTATCGCTGGAGTTTTGAGGAGGCAAGATTTGCAATGACTGCAGTGAAGCCAGTGCT GTTAGTCATTGATGAGAGTTCCTACTCATGGTACTTAAAACTCCACCAAAATGATATCCCATCTCTGAGGTGGCATGTTT TGTTGGATTCCCCTTCACCGGATTTTACAAACAAGTGGAATGGGTTAACTCCAGAAATGATTAAGAAGCATCATGTAAAG CCTCTAGAATTTGATTACTCCTGGGCACCTGAAGGCGCTGTTATAATATGCTTCACCTCAGGAACCACAGGAAAGCCCAA GGGAGTGACCATAAGCCATGGAGCTTTGATCATACAATCTCTAGCCAAGATTGCCATTGTTGGGTATAGTGAGGATGATG TCTATCTGCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCATGGCCATGCTTATGGCTGGAGGATGCCAT GTATTGATGCCCAAGTTTGATGCTAAATCAGCAGTTGGTGCCATAGAGCAATATAAAGTGACATCTTTTATCACAGTTCC TGCAATAATGGCCAGTCTGATGTCAACATTAAGGCTCAAAGAAACATGGAAAGGGGGAGATACTGTGAAGAAAATACTTA ATGGGGGTGGAAGCCTCTCACTTGAGCTAATCAAAGACAGTAGCATATTCTTCCATAAAGCTAAGCTCGTTTCAGCTTAT GGGATGACAGAGGCATGTTCTTCATTGACATTCTTGACACTGCATGATCCAATTCACAAACCCACAAGCCAGGCCCTTCA AACATTTGGTGAGACGGGATCCGATGTCATTCACCAGCCACAAGGGGTTTGTGTTGGCAAGGCTGCACCCCATGTAGAAC TGAAAATATGTGCAGATTCCTCTGGTCACAGTGGAAAAATTTTAACTAGAGGACCACATTTAATGCTCAGGTATTGGGAA CAAATCCTCACAACCCCATTGAACCAGAGGAATGAAGTCTGGCTTGACACAGGTGACATTGGATCAATTGATTGTTTTGG CAATTTGTGGCTCCTTGGACGAACAAATGGCCGTATCAAAAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCCA TTCTACTAGAACATCCAGGCATTGCTAGTGTTGTTATTGTCGGAATCCCAGATGCTTATCTGACAGAAATGGTAGCAGCT TGTATACAACTGAGAGAAAATTGGCAATGGATCGAGCACTCTAATTCAATTGAAGAGTTTCATCTAACTAGCTTGAATCT CCAGCAACACTGTATGGAAAATAATTTAAGCAGGTTCAAGATACCGAGGATGTTTATTGAATGGACGAAGCCTTTTCCAC TTACTACCACGGGAAAAATAAGAAGAGACCAATTACAAAAGGAAGTTTTGTCTCAGCTACAATCTTTGCACAGTAACCTT TGA
Protein sequence (LotjaGi6g1v0270700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASYSRPHICQCLSQLLTFRRHFPVTIAGHRRKTGQQLVEEVSSLAQGLLQLGVTPGDVVAISAFNNDWYVEWLLAIAFV GGIAAPLNYRWSFEEARFAMTAVKPVLLVIDESSYSWYLKLHQNDIPSLRWHVLLDSPSPDFTNKWNGLTPEMIKKHHVK PLEFDYSWAPEGAVIICFTSGTTGKPKGVTISHGALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMAGGCH VLMPKFDAKSAVGAIEQYKVTSFITVPAIMASLMSTLRLKETWKGGDTVKKILNGGGSLSLELIKDSSIFFHKAKLVSAY GMTEACSSLTFLTLHDPIHKPTSQALQTFGETGSDVIHQPQGVCVGKAAPHVELKICADSSGHSGKILTRGPHLMLRYWE QILTTPLNQRNEVWLDTGDIGSIDCFGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASVVIVGIPDAYLTEMVAA CIQLRENWQWIEHSNSIEEFHLTSLNLQQHCMENNLSRFKIPRMFIEWTKPFPLTTTGKIRRDQLQKEVLSQLQSLHSNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 559 | 559 | 2.4E-260 | – | |
| PANTHER | 1 | 559 | 559 | 2.4E-260 | – | |
| SUPERFAMILY | 8 | 554 | 547 | 2.09E-110 | – | |
| Gene3D | 11 | 435 | 425 | 9.3E-79 | ||
| Pfam | 27 | 441 | 415 | 7.7E-77 | ||
| CDD | 31 | 201 | 171 | 6.50845E-13 | – | |
| ProSitePatterns | 176 | 187 | 12 | - | ||
| CDD | 176 | 541 | 366 | 4.48254E-107 | – | |
| Gene3D | 438 | 554 | 117 | 4.9E-23 | – | |
| Pfam | 450 | 539 | 90 | 6.0E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi6g1v0270700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…