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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0272100 |
| Transcript ID | LotjaGi6g1v0272100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT5G06720.1 peroxidase 2; Swiss-Prot: sp|Q42578|PER53_ARATH Peroxidase 53; TrEMBL-Plants: tr|A0A072V4V7|A0A072V4V7_MEDTR Peroxidase; Found in the gene: LotjaGi6g1v0272100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58699603..58703589) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTCCTTCTGAATTTTAATTGCTGGTTAAGTCAAGATGCCACTATAATTAAGCTACTTTTGCAGCAACAAACACTACC TTCTCAACCGCCTTCAATTTTAAGTGTTCTCTTTACTTTAATTTTGAGTAGCTACGTGTTCACTAAACGCATTCAGGACT GTGATCCTTCTCCTTCTCCTTTCTGGACTGTGATTTCAAACTCGTCGTTCTTCCGAAGCCGGTACCTTCTCCGACGCCGC TTCTCGTCGTCCGTTGGTAACCGCTTCACCGGTAATCGCATCACCGTCGTTCACTGGTAACCGCTTCTCCAACCCTGCTT CTCTGTCGTCCATTGTGCAATTTTTGACGATTTTCCGAGCTTGAAATTAGATTGCTTGATTTAATTTTGTTCCAGGTTAA AAGTCTTTTTATTTATAACAATAAGCAATACAAGAAGATAACACTAATTTCACACTTAAAACCAATTCCTATCAAATAAA GTAAACTGACCAACCAGTGAATTACAAATAAAATAATTAATTAAATTCTTAATTAGTAAATAGTCTAGAAAGTTCAGTCG GTCCCAGCAATAGTGGTGTGACACACACACACACTATAGAGTATATATAGAGGATTCTCCCGCATTGTTTGTCCATTGTA TAAAAACCCGCTCGAATTCCCATTCCCAGCAATGTTTATGATTTCATCTATGATTTGAACTTCTAAGAGAAGTTGTGTTT GCTTCAGGAGAATTCTTGAATTCGTGTCATTCCTTAAGGAGAATAACGTGGATCTTACAAACGTGAAGGTACGTAAAAGA TGATTTTGCTTCAAATACAATAACATTTTGCAGACTTTCGTTCACTTTTGCATGTTTGTCTTTTGGTTGGATATTGGTTG GATATGATATATGATTTCTTCGCTCAGATATATATGCTTCTTTCCTTTGCTCTTGTGTCAGATGTATGTTGGTTAAGGGT GGGTCAAATGTCCCACCAAATTTTCATAAAATGTGCTAATAAATGTATAGTATTGAGAATAAAAGAATTTCATTGCCCCG TATATAAGAAATGCCCCCACACACAGCCACACACCTATACATTTTCAAAAAGTTTGAACTTTTTTTAATGAGTACCCAAC CAATGTTCACACAACTTGCCATGTTTATAATTTACTAAAATTAATTATCAGTGCAATTAGATCATTAGATTGTATTTGGA AGTGGTATATTGGTAGGGCCTCTAGTACTTAGATAAGAGAACAACAAAAAGTGCATCCAAAAAATTTAAATTCTAAATTT TCTGGGGCTGAAGGACTGAATGCAAAAGTTTATGGTACTCCATTGTCCAGAAGCTAAAATGGCCCACTTGGACCTGAGCT ACATTAATGCAAACAAATGCCAAATCTGATCTTGCTTTTTACCTGTCTATATGTTAACTTAATTAAGGTTTTACCAAACT CTTTCTGATGCGTTATAAGGCTATGAGCCTAAGAAAGATGAAGAGGTTAAGTAAGAAAAATGAATTAATTTTTTAGAAAG CAGAAAAATGAATTAATAGTCTCACTAATAAAGTGAATTAATAGCATGACTAATAAAGGATTTCCAACTCTTTCGTTTAT ATTAGTTCAGGCATCTCAAAAAGCCTCCCAAATTCCCCCTATGGCTGTAATAATGTGGCGGGCTATTACGGGATTGATTA TATTATGTGCTTCACTGATCCATGCAGCAGTCCCAGTCCCAAATGGGACTGTTGCTGCTGACTTGCTCAGTCCCGATTAT TATAAAGACACATGCCCCCAACTGTACCATACCCTATCCGGTGTGATCCTCACCGCCGTTAAGACTGATATACGCATCGC TGCAAGTCTCTTGAAGCTTCACTTCCTTGATTGCTTCGTTCAGGTAATCTTTCAACTATTTATTTATTTAAACTACAAGT TTATATGATATTAAAAGATAAGGCTGAAATAAAATAAGTGTTAACATTATTGCGTTTTATCTTTGTGACCGATAGGGATG CGATGGATCAATATTGCTGGTCGAAACTGCCAAGATACGAAGTGAGCAAAGAGCATCTCACAACATGCACACAGTGAGGG GGTTGAATGTGGTGTATGATATTAAGCGTGCGGTGGAAGCAGTATGTCCGGCTACAGTATCATGTGCTGATATTCTTGCG TTATCTGCGCAAGTCGCTTCTGTTGTGGTAAGGGGTAGCTATAGATTATTTCCCAAGCTTTTTATTCCTAAATCATTTTT GTTCTAATTTTGGTGACTTTAATTTATTGTTTAAAATAAATGGTGACTTGTATATATGTTTACAGGGAGGAGGTCCCACG TGGCAGGTTCCACTGGGAAGAAGAGACAGTTTGACGGCAAATAAGTTTCTCGCCAATCAAAATATTCCAGGAGTAGCCTT CACAGTGGATTATCTCAAGAATTCTTTTGCGGCCCAAGGTCTCACCACCACGGATCTAGTTGCCCTCTCAGGTAAACTCA TTATCTTTTTGCCACAATTTGTTTTCATATAAGTAGTAAAATTTGATGAGCCAACTACTTAAGGATTTATTTGCTTAGAG CAAAAGTCTTAGAATTTAACATGCCCTTCCTAGTAAAAATTGTGGCTTCACGAGAATCTTCAATATATTTGCTGCCCACG TCCTAGTTGTGTATGCATGACTTATGTTCACAATTCAACTAAACCTACAATTATATGAAAATTATTCCCAGAATAATATG TTTGCTTTATTTTTTATTTTTCTTTAAATGTCTAAATTTAACCAACTGACATTTATAAATCATTGAATATTCATAAATAT TTTATTTTTTGCAATTTTTTTCTGAAGAATTTATATTTTTCATTTTAACTTTTATCATCTAATTCTTAAATTTCATATCC AAATCAAGATAAAATATTTTCTCTTTAAATTCTAACTTGTAGTTTGTTTGGATGTGAAACAAAGAATAGTTTTCTTTTTT GAAACACCAAAGAATACTTATTACGTTTAAAAAAAAAAATACTTATTAGAGAGAATCTGGTGTTTTCCATTAGTAGATAA ATCTAAAAAGACAAGTCCGTCGGTTTCTTCCTCAAAATATATAATATATTACAAATGTTTTAAAAATATAAATAATTAAG AACAACTACGTAATGAGTAACGAACATATTACATTTTGAGTTCAAAAAACTAACATATTACATTTTTAATGACTCACTAT TATTGGGTTTATCGAACAACCACAAAATTTGCGGGAAAGGCCGGAGGGATATTAAATGTGGGCGAGGATCTAATTCTAAG AGAAAAATAAGATAAAAAAATGTGTGCATATATTAAAAGTCTTCAGCAAATGAATTTAGTTTTGTATAGATGACCTATAT CTCATTTGTGTATTTAATTAGGTGCCCATACGATTGGAAGAGCTCACTGCAGAACTTTCATGGACCGTTTGTACGATTTC TCTGGGAACCCTGACCCCAGTATGGACAGCACATACTCAGATTCATTGCGTGCTTTATGTCCTCGAGATGGATCTGGGGC CAATTACGAGACCTATTTGGACTTCTCTTCCCCAGATATTTTTGATAACGGTTATTACATGGGCCTCCAAGTAAACCAGG GTTTACTACATACGGATCAAGAGTTGTATTCATCCACTAATGCAGACACTGCCATGCTTGTCTCCAACTTCAGTAGCGAT CAAAAACTATTCTTTGATCAATTTGTTGAATCAATGATCAAGATGAGTAGGATCGGTGTGCTAACGGGAAGTGATGGGGA GATCAGGCATCAGTGTGATTTTGTCAATGTTGGCATTCGCTTCCCCTTCTCCTACTTTTGGTTGTTTTGGACTGTATTAG TTACTTATATATGTATTACTTTATGTTAGTATTATTTTAGACCTTATTATTTACTCGTATATGTATGACTTTATGCTAGT ATTTTATAAATCTTTGATGATGCATTCAGTTCTGTATAAGCAATTCATTGTGTTAAGTAAACTTTCC
CDS sequence (LotjaGi6g1v0272100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTAATAATGTGGCGGGCTATTACGGGATTGATTATATTATGTGCTTCACTGATCCATGCAGCAGTCCCAGTCCC AAATGGGACTGTTGCTGCTGACTTGCTCAGTCCCGATTATTATAAAGACACATGCCCCCAACTGTACCATACCCTATCCG GTGTGATCCTCACCGCCGTTAAGACTGATATACGCATCGCTGCAAGTCTCTTGAAGCTTCACTTCCTTGATTGCTTCGTT CAGGGATGCGATGGATCAATATTGCTGGTCGAAACTGCCAAGATACGAAGTGAGCAAAGAGCATCTCACAACATGCACAC AGTGAGGGGGTTGAATGTGGTGTATGATATTAAGCGTGCGGTGGAAGCAGTATGTCCGGCTACAGTATCATGTGCTGATA TTCTTGCGTTATCTGCGCAAGTCGCTTCTGTTGTGGGAGGAGGTCCCACGTGGCAGGTTCCACTGGGAAGAAGAGACAGT TTGACGGCAAATAAGTTTCTCGCCAATCAAAATATTCCAGGAGTAGCCTTCACAGTGGATTATCTCAAGAATTCTTTTGC GGCCCAAGGTCTCACCACCACGGATCTAGTTGCCCTCTCAGGTGCCCATACGATTGGAAGAGCTCACTGCAGAACTTTCA TGGACCGTTTGTACGATTTCTCTGGGAACCCTGACCCCAGTATGGACAGCACATACTCAGATTCATTGCGTGCTTTATGT CCTCGAGATGGATCTGGGGCCAATTACGAGACCTATTTGGACTTCTCTTCCCCAGATATTTTTGATAACGGTTATTACAT GGGCCTCCAAGTAAACCAGGGTTTACTACATACGGATCAAGAGTTGTATTCATCCACTAATGCAGACACTGCCATGCTTG TCTCCAACTTCAGTAGCGATCAAAAACTATTCTTTGATCAATTTGTTGAATCAATGATCAAGATGAGTAGGATCGGTGTG CTAACGGGAAGTGATGGGGAGATCAGGCATCAGTGTGATTTTGTCAATGTTGGCATTCGCTTCCCCTTCTCCTACTTTTG GTTGTTTTGGACTGTATTAGTTACTTATATATGTATTACTTTATGTTAG
Protein sequence (LotjaGi6g1v0272100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVIMWRAITGLIILCASLIHAAVPVPNGTVAADLLSPDYYKDTCPQLYHTLSGVILTAVKTDIRIAASLLKLHFLDCFV QGCDGSILLVETAKIRSEQRASHNMHTVRGLNVVYDIKRAVEAVCPATVSCADILALSAQVASVVGGGPTWQVPLGRRDS LTANKFLANQNIPGVAFTVDYLKNSFAAQGLTTTDLVALSGAHTIGRAHCRTFMDRLYDFSGNPDPSMDSTYSDSLRALC PRDGSGANYETYLDFSSPDIFDNGYYMGLQVNQGLLHTDQELYSSTNADTAMLVSNFSSDQKLFFDQFVESMIKMSRIGV LTGSDGEIRHQCDFVNVGIRFPFSYFWLFWTVLVTYICITLC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| PANTHER | 14 | 343 | 330 | 5.6E-131 | – | |
| PANTHER | 14 | 343 | 330 | 5.6E-131 | – | |
| Phobius | 21 | 32 | 12 | - | – | |
| Phobius | 33 | 342 | 310 | - | – | |
| ProSiteProfiles | 35 | 336 | 302 | 71.515 | ||
| SUPERFAMILY | 36 | 336 | 301 | 3.09E-100 | ||
| CDD | 36 | 335 | 300 | 1.23689E-154 | ||
| Gene3D | 40 | 336 | 297 | 1.7E-109 | – | |
| PRINTS | 45 | 64 | 20 | 1.4E-57 | ||
| Pfam | 57 | 299 | 243 | 5.9E-67 | ||
| PRINTS | 67 | 81 | 15 | 1.0E-29 | ||
| PRINTS | 69 | 89 | 21 | 1.4E-57 | ||
| PRINTS | 109 | 122 | 14 | 1.4E-57 | ||
| PRINTS | 128 | 138 | 11 | 1.4E-57 | ||
| PRINTS | 129 | 146 | 18 | 1.0E-29 | ||
| PRINTS | 147 | 159 | 13 | 1.0E-29 | ||
| PRINTS | 147 | 162 | 16 | 1.4E-57 | ||
| Gene3D | 173 | 315 | 143 | 1.7E-109 | – | |
| PRINTS | 194 | 206 | 13 | 1.4E-57 | ||
| ProSitePatterns | 195 | 205 | 11 | - | ||
| PRINTS | 195 | 210 | 16 | 1.0E-29 | ||
| PRINTS | 252 | 267 | 16 | 1.4E-57 | ||
| PRINTS | 254 | 269 | 16 | 1.0E-29 | ||
| PRINTS | 268 | 285 | 18 | 1.4E-57 | ||
| PRINTS | 310 | 323 | 14 | 1.4E-57 | ||
| TMHMM | 343 | 361 | 19 | - | – | |
| Phobius | 343 | 361 | 19 | - | – | |
| Phobius | 362 | 362 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0272100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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