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LotjaGi6g1v0277000.1

Overview

Field Value
Gene ID LotjaGi6g1v0277000
Transcript ID LotjaGi6g1v0277000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Cinnamoyl-CoA reductase; TAIR: AT2G02400.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|G7IFT8|G7IFT8_MEDTR Cinnamoyl-CoA reductase; Found in the gene: LotjaGi6g1v0277000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:59388929..59398175) extracted from Lotus japonicus Gifu genome v1.2.

AGGCTTAATACATCAGAAGACCCCTGAAATTGTAAAGGGAATCAGTTCCAGGACCTGTAAATTTTTTGCATCAAATTGGG TCCCTAAGAATTTTTTTTTAATTCAATTAAGGTCAAATGCTGTCAGACTTCAATTTTGTCCTAGTCATCAATTACACGTG GCTTTTATGATTTTTTTAATTAAAAAATGATAAAACTTTATTTTTTAATTCCAACTCATATTAAAGCATAAATAAAAATA AATAAAAAACTTAATAAAATCCCTAATTTCAATAAAATCCCTAATCTAATTCCAAAACTAACTAAATAATTACTTAAACT AAATAATAACAAATTCCAAACACAATCTATCAACCCCACCAAACCCAAACCTAGAACAGAGGAAGATGAAGGAGAAAGAC CATTGAAAACCCAATCCCATCAACACCACACCAAATCGTCTCCCCACCGGACCAAATCTGTCTCTGGAGCAGCGACCTTG CGCGCCGCCGTGCATATCCGTGTCGCCTCTTCATCATTCGCACCGTTGATCTCCTTCCCTACCGCATCATCACCATCAAC GATGCATCCTCCATCTGCCTCTCCTCTCCACCACGCTCCCTCCTCTCAACCAAATCTGACCAGATCTTCCATTTGCCTCT ATGTTGCATAGAGTATGAGCAACTTACGTTTTTGTGGTATGCTTCTGATTGAAAAGCTCGCAACTTTTATTATTAAAAGC AAAGAAGCAGCAAAGGAGAGACACTTCAAACATGATTTGAGTTATTGAATGAATGAAATTGAAATGAATTATGCCACACT TCACATTTCAATTGGTTGAATCTGCAGGTCCCATTTGAATCGTTATAGGTTGGTGTTGTTGATGTGAATACCTGCAATCG AGGTTGAAGTGAGGGTTAATTTGGGGGTTTTAATTTTTTAATGGATATGTTATTAAAATTATTGTTTTAATCTATACGAG TTTTTGCAAACTTGAGGGCAAAATTGTAATTTAATATTTTAATACACATGGGTGGAAATTTTTCCATGGTCATATACGTA AATTTGTTAGTAATTCAATATGAAATCAATCTTGACCATTCATTGGTTCTAATCCTAACCGTTGGTCTTTTTATTATGAA ACCCTTTGTATAACCTTCTCATATTCTTGGGAGTTTTATTTGTTGCATTTGTAACTCCTGATTATGGATTATGGTTACAA AATCACCAAGAGTCTCTTCCTTCTTCTCCCATATAAAAAGCATCTTTTCATTCCCCTTTCAAATTATTTTCATCTCTTTC ATTTTTTATCTTTAGCATATCCATTCATGTGCAAGTAATCTCTCCAATTTAGATCCTCCAACAGCATCATTCCATCACAA GAAGATATTCTATCAGGTTATAGAATTTTCTTTTGCATATTTTCTTCTCTATTGGTTACTTCTTTTTCATCATTTTTCAT TTTCAGGCATTGATGTTCTTCTCCATCATCGTCTTCAATCTGGTAAGAGCGCTTCTTTTTTCGCCTTATTTATATCTTTT AATTTATCTGTTCTGATTTTTCCATCATTTCTTCTTCAGATTTTGTTCTCATGCTACGTTCTTCTCAAACGGTTTTATTT TTTCCGATTCATTCTTCTCATTCTTCATCTCTCACTCCTGTAAGTTTCAGTCTTTATTTGCAATATGGATGTTGTTATCA CTTATTCAATATATGAAAGTTACTCACTTTATTTTACTTTTATAATTTATGCATGTTTTGTTCTTTGCTATTGATTAACT ATTATTATCAAAAATTCTTTTTCTTCATAAACTTTAAAGTCATCTCCTTGGTTATTTCTCTAATTGTGTTTCATTATTTT TCTTGCACAATTTTATGATGTTTGCTTCCATTCTTTGACAGTTTAATCTTCAACCAATGTGAGTTTCTTGCTTTTTTAAA ATTTTGATTAATTTTTTATCAATTAGTTTACCAAATGATAATCTTTTCTTCTAATCCGGTATAATGAAGCATTTTTCCTC CTTTTACATTTCATTGATTTAGTTTCAATTTGTCATCTTCATCGTCTTCATTAAGTTTAATCCAATTTATGTCATTTACA CTATGAATGTGGTCACTAATTTTACATTATTGTTTTCGGTTTTCGGTTTAATTCTACCTTCTTATTCCTTTTATCTATCA ACTCTATTTGTTGAGTTTTATTTCATTTTTATTTAAATTTAAAAAAAAATTAAAAAATTGAAGGATACATATTATTTCAT ATGTGATTTTTGAGAACCGTTCGATATTTAGCAGACTTTTAATCTTAGTCGTTCGATATTCCCCTTGAACTTCCTCCATC AATGTTAGTATATAACTTTCTACTATTAAGCTCAAAATTATTTTAAATGAATTTATTATTATTTAATTTATATGAGTTAT GGAATGTCATAGGTCAAAATTAACATTGAATATGATATTAGTTATGAATTCCATAAGACACATATTATTAGTTTAGATTT GTTGAAGTATTAATCAACTAATAATTAATATTAATAATAAACCTTAAAAGTTAAAGTCACTCAATAAAAAAAACTTCCGT CTTCCGATGTATCGAAAAAAAAAACTTCCCTATCCCTTCCTCTTGAACTTCTTTCATCAATGTAATTATATAGACTTCTA CTATTAATTGAAAATTACTTGAAATAAATTTATTATTGTTTATTTCATATGCGTTATGAAATTCAAAAATGTATGCTTAA TACTAAATAAGATCTTACCAAAAGAAAAAAGGACAATCACTAACCCTTTTCTCTACAACTATATAAATTAATAAGTGTCA ATAATCATTCAATATTTGCACTTCACATAAGTTTTATTGAGGTATTTGCTTTTATTTTTTCAATGACTCAAGCTTCAAGA CATTTTTTCAGTACTTATATCCAACGACTAGCTATTGATGTACTAGCCTAGAATGTTTACATATGTTCTAACATGCATTT TATTTTATGATGATCTTCAACTTGATTTCATCATGTAAAATTGGAACACCTAAAAAATTATTTTCTCTTTGATTTGCTAA CTTTTTGTTATGTAGGATGACGCAAACAGTTTGTGTGTGCCATATGTGGGAAACAAGGGATTTCAAAAAACCTCAAATTG TTAATAGTATTGAACTGCTCTTAATCGTTGAAAAGGTATTCAATTTCTATGTTTTCCCCACTTTCATGGTACCTAATTCA AACTATTTATTGTTACCATAACAAAGTGAATTTTTAAAATTGTAGTTTTTCAAATGCCACAGTTTAGTGACACACTATGT GTATGAGAAGTTTATGCGATTCCGAATATCATGGTTCAAGCATCTGCTAGAAAATATAGAGTTACAAAGCATAAATGCAT GATTACTTGAATGAGCATTTAAAAAACTGAAGAGGCTACAAGTGACACTACTACTACAACAAAATATGATTTTGGTACCA TTTAATATAATTGACATCATTTTCATGTAATCGATTATCTCTGAAGAAACCAAGGTTTATAGTGCTAATTTATTTTATAA AAGAAAGCACATACAATACCGCATGGCAACTAATTTCATCTTTTAATTAACAACAATAATCCATATGGATTAACCTCTAA CATTGCTTCCTTAAATGGATGACCCTAATATTATGTTGTTTCTAACTTTTTTTTTTCATTCTTCATTGCTTTACTCTGCA TTGCATCGTTCTCCTCATTAGCCACTGAAACTCACAATCCCCAATATGCATATTGCATATATACAAAACTTTTTTCTGAT ATAACTTTCAGATGTCCATGTTCACAAATAAGTATTTGTAACTTACTACATCTCTTATTTTTTTCCTAAAAAAATGAGAA GGTCCAAGTTTTCTAAGATTGCGAAATTTTGTTTAGACGGGTTTAACTTGATTTCATCCTACTTTATATTGAGTTTAATA TGAACAAACTATGAATTATTTGTAACCAAATAAAAAAACTATGAATTATTTTTTTAACATATTTATTACTTTCAAGTTTA TTTACCAACATTAATATAATTATAATTTTTATCAATACTTAATTTTAATTTTATGATAACGAATAGCAAAATCTAATATT AACAAAGTACAAATTTTATATTTAAGCACATCTATTATTGAACTCATATGAGTTATGAAATTTATAGAAAAAAAATTACA TTAAAACTTAGAGAATTCAATAAGACACACATTATTAGTTTAAATTTTTTGAATAATCAATCAAGTAATAATTTATATTA ACAATAAAATTTAAAAGTTAAAATCCATTCAATAAACCAACCATCCCCTATCCATTTACCTTTGAAATTCCTCAATTAAT GTTAATTAGTCTATACTTTTCTACTATTAACCTCATAATTATTTTAAAATAATTTATTATTATTTAATTCATATGAGTTA TGGAATGTCATAGAGTAAACTTGATATTAAATATGATATCACAAAAAAAAATACATAGTAAATACCACAAACATGTGATG CAAAAAAAAAAAAATCTCCCTTGGACTTCCTCCATTTATTATTATTTTTTCCATATGATTTATGAAAGATCAAAGAGTAC ACCTAATATTAAATATGTATCACTCAAAACAATTATACATAAATACCAAAATAATATCACAAACATGTGATGCAAAAGAA AAAATTATTTCTATCTCTCTCCGTGAACGTCCTCCATCAATGTTAGTTTACAACTTTCAACTTATTTATTATTATTTAGT TTATATGATTTATGGAATACCATAGGGCAAATTTAATATTTAATATGATATCACTAAAAAAATTCATAACTACCAAAATA AATATTACAGACATGTGATGCAAAATAAAAAACTATCGTTATCCCTTTACATTCTTCATCAATGTCTTATAACTTTCTAC TATTAACCTCAAAATAATTTAAATGGATTTATTATTTAATTTATTTGAGTTATGGAATGTCATGAGATAAAATTAATATA AATATGATCTCACTAAAAACACATATATAGGAAATTTCATAAGACACATATTATTAGTTTATGTTTGTTAAATATTAATC AACTAATAATTATATTAATAAAAACCTTAAAATTTAGAGGTCATTCAATAAAAAAACTCCTCTAACTCTTCCTCTTGATC TTCCTTCATCAACGTCATTCTATGGACTTATACTATTAACTTCAAATTGTTTTACAAAAAATTATTATTATTTATTTCAT ATGAGTTATGAACCTCAAAAAGACAAACTTAATACTAAATAAGATCTTACAAAAAATACTACCTCTATCTGTAAAGTACA ATAAAATTGTTATATTAAAAGAATAAATCTAAAGCATCAATTAGATAAACAAGGACAAACAACACAAAAAAAAAAAAACA AATACACTCATAAAAAAACGTACAAAAAAGAAACAAATACAATCAAAAACATAAATTAACACTTCGACAAAATACACTTA ACTATCACAGTTTTTTTCTTTCTTTTTCATACGAATAAATAATTTAAGAAAGTCATAAAAAAACACAATACAAAATAAAA AAGTATACCCCCGTGCGTTGCACGGGTAAAAAGTACTAGTAATTACCTATAAAAAAGTTAACCTATAAGATTAGGGATTA GTTTAGGTTTTGTATTAAGATTTTATTAATATTAGATTAGGATTTTTTTTTTATTTTTTTTTCTGATTAAATAAATGAGT TGGAATAAAAAATTAATTTTTAATAATTTTTTTAATTAAAAAATAAATAAAAAAGCCATGTGGAATTGCTGACTAGGACA AAATTGAAGTATGACATCATTTGTCCTTAATTTAATTAAAAAAAATTTCTTAGGAACCCAATTTAATGCAAAAATTTTAC AGGTCCTGGAACTGATTCGCTTTATAATTTCAGGGAGCCTTTGATGTATTAAGCCTTAAATGTAAGTAGAGATTTTCCAT TTCCGACAAGAGATTGTGTGTGTGTGAGAGAGAAGCATGTCTAACCCGAAAACAGAGGAGGTTGTATGCGTCACCGGAGC CAACGGGTTCATCGGCTCATGGCTGGTCCGAACCCTGCTGGAGAAACACAACCCACGCTACACCATCCATGCCACCACCT TCCCCTCCTCCGACCCCACCCACCTCTTCACCGTCCACCCGGAAGCCCATTCCCGCATCACCATCTTCCCCGCCGACATC CTCGACTCCGCCGCCGTCTCCCGCGCCATCCACAACTGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACGCTCGACGA CCCGGAAGATCCTCACAAGGACCTGATCCAGCCCGCTGTACAGGGAACACTCAACGTCCTCGAAGCTGCCAAGCGCGCCG GCGTGAGGCGCGTGGTGCTCACCTCCTCGATTTCGGCATTGGTCCCGAATCCCAACTGGCCGGAGGGAAGGGCCGTTGAT GAGTCGTCGTGGACGGATGTGGAGTTCTGCGAGTCGAGGCGGAAGTGGTACCCGGTGTCGAAGACCGCGGCGGAGAGGGC GGCGTGGGAGTTTAAGGAGAAGCAGGGTGGTGCTGAGGTGGTGGCGATTCATCCTGCCACGTGTTTGGGCCCGCTGCTGC AGCCGGAGTTGAATGCTAGCTCCGCCGTGCTGCAGCGGCTGATGACGGGGTATAGGGACACGCAGGAGCATTACTGGTTG GGTGCGGTGCATGTTAAGGATGTTGCTAGAGCTCAGGTCTTGCTTTTTGAGACCCCCACTGCTGCGGGTAGATATCTATG CACCAATGGTATCTACCAGTTTTCTAGTTTTGCCAGCATTGTGTCTGAATTGTACCCTGATTTCCCTGTTCACAGGTTGG TTAATCTCTTGTTTTCTTATTCTTTTGGTTGAGCAAATGTTGAGTTTGAGGGTGGATGATTGGTTATTCTTTTATGATTC CTTCAAATGTGACATGATAACTTGTATAGATAAGAAGTATCACTAGCAAGATGCTTTATGATTTTTCCAACATAGATATG TGAAATTCATGTGGCTCTTTTGAATAATGCGGGTTGTGACTTGTTAGACTCATTTCCTCTTTGTTGGAGGGACTTGCATG GATTTTGCTTAGTGGGGAAGTGTGTATTGAGAAGAGTGTCCTGGAGAATGGGTCTTGTGTCTTGTTTACCTTTCTCATGT AAGGAGAGTTTTAAATCCTGTCTAGTCTGTGTTTTTCATTCTTCTACCTTCAGAACTGTGCAATTCCTTTCTGTTTCTTT CACAATGATTTCGCTCATTGATTTTGTCATCCCCCAGCTGCTTTTCCTTTTGATACAGCTCTAGTTTTATTGTTTTAAGC CCCTCATTGTGCTTATTCAAAGTTTTTGCAATTCTATAGTGCTGCTCTGTTGGTGCTATGTTCCGTGAACTATAAGCTTC TTATGTATCATATAGCATGTGGAGAAATATAGATGTATGGGTTTAAGGAAAGTGATTTAGCTACAGGTATACAACAAGAA GATAGCATGTGAATATGCTGATAGTATACTAGTATCACAAATTTAGATTCAACTTGTAGTAGGTTGCTGAATATATTAAG AGAAGCTAAGGTTGGATAGGGTGAAGACCATCCATCCTCTTGTGCTTCCCTAATAGTGTTTGGTATAGCTTTTTGCAGTT TGCACTAATGGCAATACACTTCACTCCAAAGCTACACACGGGAGCTTGATTTGGTTTTGGGACTTACCATGGGTGGCTAT TGGTTTCCAAACACCCTCTAAACATCTTGAAGAAAAAGAGGGGGAAAGAGTTGAGATACATTTCTTTATGGTGGAGTTTG AAAAACATAATCTGTCTGTTATTCACAGACTGCCGATTCTCCTCTTCCATCCCCATCTTGGTGCTAGACTGTTAGTCAAT AGTTCTTTGTGGAATACCTTAAGTAAAACTTAGGTAAAGTAAAGGTAGTCTTTTACTAGAAAAGGAATGTTTTTGGTAAC TCAAATATCAAAAGTATAAGAATTTGGGTTACACCTTATCTGAGAGATGCCATTACTCACTAGACATGTGATGCAAAGGG AAGAGAGATAGAGGGGTGAAATGTGTGTAAAAAGAGGAGTGAAAAAATCAAAACTCATAATGAAACTCACCAACATAACA ACTTGTGGCAATTTAAATTTGCAAGATGGAGTAGTGAGGAACCAAGTGATATCACACATTTATATGCTTACCTTTATAGT CTATGTGAGCAAAATGTGGTTACTGTAACCACTTTGGAAACGGGCATCAGTTGCCATTGCTTTTTGGAGCATATATTGTA TCCTAGACGTCTCTTTATAGCTTTTTCATTTTTTTCCCTTGGGCTGAATGACATCATTCAGTCATTATTCATGGAATATG AGTTTTTCCCGTTCTTGTAGTTATTGAAAATTGTGCTACAAAATTTGATTTGAAAGCATGGTTTGGATCAGAAAAAATGA TCCCAATTATATTGTTTCCCACTAGCTGCCAAATGAAAGAAATTATAAGACGTATCTTGTTAGCAACTTTTATTAGGAAA TTGTGTTCAAAATCCTATGGCATACTTTATCATAGACCTTCCACCTTTTAGGAAATTCAATTCTGTTGGCTATGCATGTT ATGTAGAAATAATACATCCTTTTTATGATTTTATCAAGATTCATATTAATTAAGCTAATTGAAAACATATTTAAACTCTG TTTTTCTACTCTCGGTCTGCTAAATTATCTTACATAGTTTGCAAGTTTTCTGACTCTGAACAAGAACTACATGCAGGTTC CCAGAGGAAACTCAACCTGGCCTTACTCCATGTAAAGATGCAGCAAAGAGGCTAATAGACTTGGGCCTCGTCTTCACACC AATTCAAGATGCTGTGAGAGATGCAGTTGAGAGCCTCATAGCTAAAGGGTTCCTGGAGCTACCACCCACACAGAAATAGA TGTTAGATTTCATTTAGGGTATGTTTAGTTTCCATTTCTAGTTTCTGTTATCAGTTTTAACTATAAAAAATGCTACCTTG TTTTCGCTTTATTTTATGTTTTCATAATTTTGTATAGGAAAAAATGACAATAATAATGGAATTAGGCAAAAATAATCTTT GCCTTATAGTTATTTCTTTAATATAAGGTGGAAGAAATAAGAATTAATAAGTTAATTGTATTAAGTTTAGCAACTAAGTG GCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCTCGAATCCCAGCAGCCACAATTTTGGTTAT TTTTTATTTTTATTTTATTTATAAGTGCGATCTAGTATCTAGAAAAT 

CDS sequence (LotjaGi6g1v0277000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTAACCCGAAAACAGAGGAGGTTGTATGCGTCACCGGAGCCAACGGGTTCATCGGCTCATGGCTGGTCCGAACCCT GCTGGAGAAACACAACCCACGCTACACCATCCATGCCACCACCTTCCCCTCCTCCGACCCCACCCACCTCTTCACCGTCC ACCCGGAAGCCCATTCCCGCATCACCATCTTCCCCGCCGACATCCTCGACTCCGCCGCCGTCTCCCGCGCCATCCACAAC TGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACGCTCGACGACCCGGAAGATCCTCACAAGGACCTGATCCAGCCCGC TGTACAGGGAACACTCAACGTCCTCGAAGCTGCCAAGCGCGCCGGCGTGAGGCGCGTGGTGCTCACCTCCTCGATTTCGG CATTGGTCCCGAATCCCAACTGGCCGGAGGGAAGGGCCGTTGATGAGTCGTCGTGGACGGATGTGGAGTTCTGCGAGTCG AGGCGGAAGTGGTACCCGGTGTCGAAGACCGCGGCGGAGAGGGCGGCGTGGGAGTTTAAGGAGAAGCAGGGTGGTGCTGA GGTGGTGGCGATTCATCCTGCCACGTGTTTGGGCCCGCTGCTGCAGCCGGAGTTGAATGCTAGCTCCGCCGTGCTGCAGC GGCTGATGACGGGGTATAGGGACACGCAGGAGCATTACTGGTTGGGTGCGGTGCATGTTAAGGATGTTGCTAGAGCTCAG GTCTTGCTTTTTGAGACCCCCACTGCTGCGGGTAGATATCTATGCACCAATGGTATCTACCAGTTTTCTAGTTTTGCCAG CATTGTGTCTGAATTGTACCCTGATTTCCCTGTTCACAGGTTCCCAGAGGAAACTCAACCTGGCCTTACTCCATGTAAAG ATGCAGCAAAGAGGCTAATAGACTTGGGCCTCGTCTTCACACCAATTCAAGATGCTGTGAGAGATGCAGTTGAGAGCCTC ATAGCTAAAGGGTTCCTGGAGCTACCACCCACACAGAAATAG 

Protein sequence (LotjaGi6g1v0277000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSNPKTEEVVCVTGANGFIGSWLVRTLLEKHNPRYTIHATTFPSSDPTHLFTVHPEAHSRITIFPADILDSAAVSRAIHN CSGVFHVASPCTLDDPEDPHKDLIQPAVQGTLNVLEAAKRAGVRRVVLTSSISALVPNPNWPEGRAVDESSWTDVEFCES RRKWYPVSKTAAERAAWEFKEKQGGAEVVAIHPATCLGPLLQPELNASSAVLQRLMTGYRDTQEHYWLGAVHVKDVARAQ VLLFETPTAAGRYLCTNGIYQFSSFASIVSELYPDFPVHRFPEETQPGLTPCKDAAKRLIDLGLVFTPIQDAVRDAVESL IAKGFLELPPTQK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 2 333 332 6.2E-101
PANTHER 6 324 319 5.3E-156
PANTHER 6 324 319 5.3E-156
SUPERFAMILY 6 320 315 1.62E-58
CDD 10 304 295 2.94778E-131
Pfam 10 249 240 1.7E-27

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0277000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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