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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0277000 |
| Transcript ID | LotjaGi6g1v0277000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT2G02400.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|G7IFT8|G7IFT8_MEDTR Cinnamoyl-CoA reductase; Found in the gene: LotjaGi6g1v0277000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59389040..59398175) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAATGCTGTCAGACTTCAATTTTGTCCTAGTCATCAATTACACGTGGCTTTTATGATTTTTTTAATTAAAAAATGAT AAAACTTTATTTTTTAATTCCAACTCATATTAAAGCATAAATAAAAATAAATAAAAAACTTAATAAAATCCCTAATTTCA ATAAAATCCCTAATCTAATTCCAAAACTAACTAAATAATTACTTAAACTAAATAATAACAAATTCCAAACACAATCTATC AACCCCACCAAACCCAAACCTAGAACAGAGGAAGATGAAGGAGAAAGACCATTGAAAACCCAATCCCATCAACACCACAC CAAATCGTCTCCCCACCGGACCAAATCTGTCTCTGGAGCAGCGACCTTGCGCGCCGCCGTGCATATCCGTGTCGCCTCTT CATCATTCGCACCGTTGATCTCCTTCCCTACCGCATCATCACCATCAACGATGCATCCTCCATCTGCCTCTCCTCTCCAC CACGCTCCCTCCTCTCAACCAAATCTGACCAGATCTTCCATTTGCCTCTATGTTGCATAGAGTATGAGCAACTTACGTTT TTGTGGTATGCTTCTGATTGAAAAGCTCGCAACTTTTATTATTAAAAGCAAAGAAGCAGCAAAGGAGAGACACTTCAAAC ATGATTTGAGTTATTGAATGAATGAAATTGAAATGAATTATGCCACACTTCACATTTCAATTGGTTGAATCTGCAGGTCC CATTTGAATCGTTATAGGTTGGTGTTGTTGATGTGAATACCTGCAATCGAGGTTGAAGTGAGGGTTAATTTGGGGGTTTT AATTTTTTAATGGATATGTTATTAAAATTATTGTTTTAATCTATACGAGTTTTTGCAAACTTGAGGGCAAAATTGTAATT TAATATTTTAATACACATGGGTGGAAATTTTTCCATGGTCATATACGTAAATTTGTTAGTAATTCAATATGAAATCAATC TTGACCATTCATTGGTTCTAATCCTAACCGTTGGTCTTTTTATTATGAAACCCTTTGTATAACCTTCTCATATTCTTGGG AGTTTTATTTGTTGCATTTGTAACTCCTGATTATGGATTATGGTTACAAAATCACCAAGAGTCTCTTCCTTCTTCTCCCA TATAAAAAGCATCTTTTCATTCCCCTTTCAAATTATTTTCATCTCTTTCATTTTTTATCTTTAGCATATCCATTCATGTG CAAGTAATCTCTCCAATTTAGATCCTCCAACAGCATCATTCCATCACAAGAAGATATTCTATCAGGTTATAGAATTTTCT TTTGCATATTTTCTTCTCTATTGGTTACTTCTTTTTCATCATTTTTCATTTTCAGGCATTGATGTTCTTCTCCATCATCG TCTTCAATCTGGTAAGAGCGCTTCTTTTTTCGCCTTATTTATATCTTTTAATTTATCTGTTCTGATTTTTCCATCATTTC TTCTTCAGATTTTGTTCTCATGCTACGTTCTTCTCAAACGGTTTTATTTTTTCCGATTCATTCTTCTCATTCTTCATCTC TCACTCCTGTAAGTTTCAGTCTTTATTTGCAATATGGATGTTGTTATCACTTATTCAATATATGAAAGTTACTCACTTTA TTTTACTTTTATAATTTATGCATGTTTTGTTCTTTGCTATTGATTAACTATTATTATCAAAAATTCTTTTTCTTCATAAA CTTTAAAGTCATCTCCTTGGTTATTTCTCTAATTGTGTTTCATTATTTTTCTTGCACAATTTTATGATGTTTGCTTCCAT TCTTTGACAGTTTAATCTTCAACCAATGTGAGTTTCTTGCTTTTTTAAAATTTTGATTAATTTTTTATCAATTAGTTTAC CAAATGATAATCTTTTCTTCTAATCCGGTATAATGAAGCATTTTTCCTCCTTTTACATTTCATTGATTTAGTTTCAATTT GTCATCTTCATCGTCTTCATTAAGTTTAATCCAATTTATGTCATTTACACTATGAATGTGGTCACTAATTTTACATTATT GTTTTCGGTTTTCGGTTTAATTCTACCTTCTTATTCCTTTTATCTATCAACTCTATTTGTTGAGTTTTATTTCATTTTTA TTTAAATTTAAAAAAAAATTAAAAAATTGAAGGATACATATTATTTCATATGTGATTTTTGAGAACCGTTCGATATTTAG CAGACTTTTAATCTTAGTCGTTCGATATTCCCCTTGAACTTCCTCCATCAATGTTAGTATATAACTTTCTACTATTAAGC TCAAAATTATTTTAAATGAATTTATTATTATTTAATTTATATGAGTTATGGAATGTCATAGGTCAAAATTAACATTGAAT ATGATATTAGTTATGAATTCCATAAGACACATATTATTAGTTTAGATTTGTTGAAGTATTAATCAACTAATAATTAATAT TAATAATAAACCTTAAAAGTTAAAGTCACTCAATAAAAAAAACTTCCGTCTTCCGATGTATCGAAAAAAAAAACTTCCCT ATCCCTTCCTCTTGAACTTCTTTCATCAATGTAATTATATAGACTTCTACTATTAATTGAAAATTACTTGAAATAAATTT ATTATTGTTTATTTCATATGCGTTATGAAATTCAAAAATGTATGCTTAATACTAAATAAGATCTTACCAAAAGAAAAAAG GACAATCACTAACCCTTTTCTCTACAACTATATAAATTAATAAGTGTCAATAATCATTCAATATTTGCACTTCACATAAG TTTTATTGAGGTATTTGCTTTTATTTTTTCAATGACTCAAGCTTCAAGACATTTTTTCAGTACTTATATCCAACGACTAG CTATTGATGTACTAGCCTAGAATGTTTACATATGTTCTAACATGCATTTTATTTTATGATGATCTTCAACTTGATTTCAT CATGTAAAATTGGAACACCTAAAAAATTATTTTCTCTTTGATTTGCTAACTTTTTGTTATGTAGGATGACGCAAACAGTT TGTGTGTGCCATATGTGGGAAACAAGGGATTTCAAAAAACCTCAAATTGTTAATAGTATTGAACTGCTCTTAATCGTTGA AAAGGTATTCAATTTCTATGTTTTCCCCACTTTCATGGTACCTAATTCAAACTATTTATTGTTACCATAACAAAGTGAAT TTTTAAAATTGTAGTTTTTCAAATGCCACAGTTTAGTGACACACTATGTGTATGAGAAGTTTATGCGATTCCGAATATCA TGGTTCAAGCATCTGCTAGAAAATATAGAGTTACAAAGCATAAATGCATGATTACTTGAATGAGCATTTAAAAAACTGAA GAGGCTACAAGTGACACTACTACTACAACAAAATATGATTTTGGTACCATTTAATATAATTGACATCATTTTCATGTAAT CGATTATCTCTGAAGAAACCAAGGTTTATAGTGCTAATTTATTTTATAAAAGAAAGCACATACAATACCGCATGGCAACT AATTTCATCTTTTAATTAACAACAATAATCCATATGGATTAACCTCTAACATTGCTTCCTTAAATGGATGACCCTAATAT TATGTTGTTTCTAACTTTTTTTTTTCATTCTTCATTGCTTTACTCTGCATTGCATCGTTCTCCTCATTAGCCACTGAAAC TCACAATCCCCAATATGCATATTGCATATATACAAAACTTTTTTCTGATATAACTTTCAGATGTCCATGTTCACAAATAA GTATTTGTAACTTACTACATCTCTTATTTTTTTCCTAAAAAAATGAGAAGGTCCAAGTTTTCTAAGATTGCGAAATTTTG TTTAGACGGGTTTAACTTGATTTCATCCTACTTTATATTGAGTTTAATATGAACAAACTATGAATTATTTGTAACCAAAT AAAAAAACTATGAATTATTTTTTTAACATATTTATTACTTTCAAGTTTATTTACCAACATTAATATAATTATAATTTTTA TCAATACTTAATTTTAATTTTATGATAACGAATAGCAAAATCTAATATTAACAAAGTACAAATTTTATATTTAAGCACAT CTATTATTGAACTCATATGAGTTATGAAATTTATAGAAAAAAAATTACATTAAAACTTAGAGAATTCAATAAGACACACA TTATTAGTTTAAATTTTTTGAATAATCAATCAAGTAATAATTTATATTAACAATAAAATTTAAAAGTTAAAATCCATTCA ATAAACCAACCATCCCCTATCCATTTACCTTTGAAATTCCTCAATTAATGTTAATTAGTCTATACTTTTCTACTATTAAC CTCATAATTATTTTAAAATAATTTATTATTATTTAATTCATATGAGTTATGGAATGTCATAGAGTAAACTTGATATTAAA TATGATATCACAAAAAAAAATACATAGTAAATACCACAAACATGTGATGCAAAAAAAAAAAAATCTCCCTTGGACTTCCT CCATTTATTATTATTTTTTCCATATGATTTATGAAAGATCAAAGAGTACACCTAATATTAAATATGTATCACTCAAAACA ATTATACATAAATACCAAAATAATATCACAAACATGTGATGCAAAAGAAAAAATTATTTCTATCTCTCTCCGTGAACGTC CTCCATCAATGTTAGTTTACAACTTTCAACTTATTTATTATTATTTAGTTTATATGATTTATGGAATACCATAGGGCAAA TTTAATATTTAATATGATATCACTAAAAAAATTCATAACTACCAAAATAAATATTACAGACATGTGATGCAAAATAAAAA ACTATCGTTATCCCTTTACATTCTTCATCAATGTCTTATAACTTTCTACTATTAACCTCAAAATAATTTAAATGGATTTA TTATTTAATTTATTTGAGTTATGGAATGTCATGAGATAAAATTAATATAAATATGATCTCACTAAAAACACATATATAGG AAATTTCATAAGACACATATTATTAGTTTATGTTTGTTAAATATTAATCAACTAATAATTATATTAATAAAAACCTTAAA ATTTAGAGGTCATTCAATAAAAAAACTCCTCTAACTCTTCCTCTTGATCTTCCTTCATCAACGTCATTCTATGGACTTAT ACTATTAACTTCAAATTGTTTTACAAAAAATTATTATTATTTATTTCATATGAGTTATGAACCTCAAAAAGACAAACTTA ATACTAAATAAGATCTTACAAAAAATACTACCTCTATCTGTAAAGTACAATAAAATTGTTATATTAAAAGAATAAATCTA AAGCATCAATTAGATAAACAAGGACAAACAACACAAAAAAAAAAAAACAAATACACTCATAAAAAAACGTACAAAAAAGA AACAAATACAATCAAAAACATAAATTAACACTTCGACAAAATACACTTAACTATCACAGTTTTTTTCTTTCTTTTTCATA CGAATAAATAATTTAAGAAAGTCATAAAAAAACACAATACAAAATAAAAAAGTATACCCCCGTGCGTTGCACGGGTAAAA AGTACTAGTAATTACCTATAAAAAAGTTAACCTATAAGATTAGGGATTAGTTTAGGTTTTGTATTAAGATTTTATTAATA TTAGATTAGGATTTTTTTTTTATTTTTTTTTCTGATTAAATAAATGAGTTGGAATAAAAAATTAATTTTTAATAATTTTT TTAATTAAAAAATAAATAAAAAAGCCATGTGGAATTGCTGACTAGGACAAAATTGAAGTATGACATCATTTGTCCTTAAT TTAATTAAAAAAAATTTCTTAGGAACCCAATTTAATGCAAAAATTTTACAGGTCCTGGAACTGATTCGCTTTATAATTTC AGGGAGCCTTTGATGTATTAAGCCTTAAATGTAAGTAGAGATTTTCCATTTCCGACAAGAGATTGTGTGTGTGTGAGAGA GAAGCATGTCTAACCCGAAAACAGAGGAGGTTGTATGCGTCACCGGAGCCAACGGGTTCATCGGCTCATGGCTGGTCCGA ACCCTGCTGGAGAAACACAACCCACGCTACACCATCCATGCCACCACCTTCCCCTCCTCCGACCCCACCCACCTCTTCAC CGTCCACCCGGAAGCCCATTCCCGCATCACCATCTTCCCCGCCGACATCCTCGACTCCGCCGCCGTCTCCCGCGCCATCC ACAACTGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACGCTCGACGACCCGGAAGATCCTCACAAGGACCTGATCCAG CCCGCTGTACAGGGAACACTCAACGTCCTCGAAGCTGCCAAGCGCGCCGGCGTGAGGCGCGTGGTGCTCACCTCCTCGAT TTCGGCATTGGTCCCGAATCCCAACTGGCCGGAGGGAAGGGCCGTTGATGAGTCGTCGTGGACGGATGTGGAGTTCTGCG AGTCGAGGCGGAAGTGGTACCCGGTGTCGAAGACCGCGGCGGAGAGGGCGGCGTGGGAGTTTAAGGAGAAGCAGGGTGGT GCTGAGGTGGTGGCGATTCATCCTGCCACGTGTTTGGGCCCGCTGCTGCAGCCGGAGTTGAATGCTAGCTCCGCCGTGCT GCAGCGGCTGATGACGGGGTATAGGGACACGCAGGAGCATTACTGGTTGGGTGCGGTGCATGTTAAGGATGTTGCTAGAG CTCAGGTCTTGCTTTTTGAGACCCCCACTGCTGCGGGTAGATATCTATGCACCAATGGTATCTACCAGTTTTCTAGTTTT GCCAGCATTGTGTCTGAATTGTACCCTGATTTCCCTGTTCACAGGTTGGTTAATCTCTTGTTTTCTTATTCTTTTGGTTG AGCAAATGTTGAGTTTGAGGGTGGATGATTGGTTATTCTTTTATGATTCCTTCAAATGTGACATGATAACTTGTATAGAT AAGAAGTATCACTAGCAAGATGCTTTATGATTTTTCCAACATAGATATGTGAAATTCATGTGGCTCTTTTGAATAATGCG GGTTGTGACTTGTTAGACTCATTTCCTCTTTGTTGGAGGGACTTGCATGGATTTTGCTTAGTGGGGAAGTGTGTATTGAG AAGAGTGTCCTGGAGAATGGGTCTTGTGTCTTGTTTACCTTTCTCATGTAAGGAGAGTTTTAAATCCTGTCTAGTCTGTG TTTTTCATTCTTCTACCTTCAGAACTGTGCAATTCCTTTCTGTTTCTTTCACAATGATTTCGCTCATTGATTTTGTCATC CCCCAGCTGCTTTTCCTTTTGATACAGCTCTAGTTTTATTGTTTTAAGCCCCTCATTGTGCTTATTCAAAGTTTTTGCAA TTCTATAGTGCTGCTCTGTTGGTGCTATGTTCCGTGAACTATAAGCTTCTTATGTATCATATAGCATGTGGAGAAATATA GATGTATGGGTTTAAGGAAAGTGATTTAGCTACAGGTATACAACAAGAAGATAGCATGTGAATATGCTGATAGTATACTA GTATCACAAATTTAGATTCAACTTGTAGTAGGTTGCTGAATATATTAAGAGAAGCTAAGGTTGGATAGGGTGAAGACCAT CCATCCTCTTGTGCTTCCCTAATAGTGTTTGGTATAGCTTTTTGCAGTTTGCACTAATGGCAATACACTTCACTCCAAAG CTACACACGGGAGCTTGATTTGGTTTTGGGACTTACCATGGGTGGCTATTGGTTTCCAAACACCCTCTAAACATCTTGAA GAAAAAGAGGGGGAAAGAGTTGAGATACATTTCTTTATGGTGGAGTTTGAAAAACATAATCTGTCTGTTATTCACAGACT GCCGATTCTCCTCTTCCATCCCCATCTTGGTGCTAGACTGTTAGTCAATAGTTCTTTGTGGAATACCTTAAGTAAAACTT AGGTAAAGTAAAGGTAGTCTTTTACTAGAAAAGGAATGTTTTTGGTAACTCAAATATCAAAAGTATAAGAATTTGGGTTA CACCTTATCTGAGAGATGCCATTACTCACTAGACATGTGATGCAAAGGGAAGAGAGATAGAGGGGTGAAATGTGTGTAAA AAGAGGAGTGAAAAAATCAAAACTCATAATGAAACTCACCAACATAACAACTTGTGGCAATTTAAATTTGCAAGATGGAG TAGTGAGGAACCAAGTGATATCACACATTTATATGCTTACCTTTATAGTCTATGTGAGCAAAATGTGGTTACTGTAACCA CTTTGGAAACGGGCATCAGTTGCCATTGCTTTTTGGAGCATATATTGTATCCTAGACGTCTCTTTATAGCTTTTTCATTT TTTTCCCTTGGGCTGAATGACATCATTCAGTCATTATTCATGGAATATGAGTTTTTCCCGTTCTTGTAGTTATTGAAAAT TGTGCTACAAAATTTGATTTGAAAGCATGGTTTGGATCAGAAAAAATGATCCCAATTATATTGTTTCCCACTAGCTGCCA AATGAAAGAAATTATAAGACGTATCTTGTTAGCAACTTTTATTAGGAAATTGTGTTCAAAATCCTATGGCATACTTTATC ATAGACCTTCCACCTTTTAGGAAATTCAATTCTGTTGGCTATGCATGTTATGTAGAAATAATACATCCTTTTTATGATTT TATCAAGATTCATATTAATTAAGCTAATTGAAAACATATTTAAACTCTGTTTTTCTACTCTCGGTCTGCTAAATTATCTT ACATAGTTTGCAAGTTTTCTGACTCTGAACAAGAACTACATGCAGGTTCCCAGAGGAAACTCAACCTGGCCTTACTCCAT GTAAAGATGCAGCAAAGAGGCTAATAGACTTGGGCCTCGTCTTCACACCAATTCAAGATGCTGTGAGAGATGCAGTTGAG AGCCTCATAGCTAAAGGGTTCCTGGAGCTACCACCCACACAGAAATAGATGTTAGATTTCATTTAGGGTATGTTTAGTTT CCATTTCTAGTTTCTGTTATCAGTTTTAACTATAAAAAATGCTACCTTGTTTTCGCTTTATTTTATGTTTTCATAATTTT GTATAGGAAAAAATGACAATAATAATGGAATTAGGCAAAAATAATCTTTGCCTTATAGTTATTTCTTTAATATAAGGTGG AAGAAATAAGAATTAATAAGTTAATTGTATTAAGTTTAGCAACTAAGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTG TGGCCGTGGAGACCTGGGCTCGAATCCCAGCAGCCACAATTTTGGTTATTTTTTATTTTTATTTTATTTATAAGTGCGAT CTAGTATCTAGAAAAT
CDS sequence (LotjaGi6g1v0277000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTAACCCGAAAACAGAGGAGGTTGTATGCGTCACCGGAGCCAACGGGTTCATCGGCTCATGGCTGGTCCGAACCCT GCTGGAGAAACACAACCCACGCTACACCATCCATGCCACCACCTTCCCCTCCTCCGACCCCACCCACCTCTTCACCGTCC ACCCGGAAGCCCATTCCCGCATCACCATCTTCCCCGCCGACATCCTCGACTCCGCCGCCGTCTCCCGCGCCATCCACAAC TGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACGCTCGACGACCCGGAAGATCCTCACAAGGACCTGATCCAGCCCGC TGTACAGGGAACACTCAACGTCCTCGAAGCTGCCAAGCGCGCCGGCGTGAGGCGCGTGGTGCTCACCTCCTCGATTTCGG CATTGGTCCCGAATCCCAACTGGCCGGAGGGAAGGGCCGTTGATGAGTCGTCGTGGACGGATGTGGAGTTCTGCGAGTCG AGGCGGAAGTGGTACCCGGTGTCGAAGACCGCGGCGGAGAGGGCGGCGTGGGAGTTTAAGGAGAAGCAGGGTGGTGCTGA GGTGGTGGCGATTCATCCTGCCACGTGTTTGGGCCCGCTGCTGCAGCCGGAGTTGAATGCTAGCTCCGCCGTGCTGCAGC GGCTGATGACGGGGTATAGGGACACGCAGGAGCATTACTGGTTGGGTGCGGTGCATGTTAAGGATGTTGCTAGAGCTCAG GTCTTGCTTTTTGAGACCCCCACTGCTGCGGGTAGATATCTATGCACCAATGGTATCTACCAGTTTTCTAGTTTTGCCAG CATTGTGTCTGAATTGTACCCTGATTTCCCTGTTCACAGGTTCCCAGAGGAAACTCAACCTGGCCTTACTCCATGTAAAG ATGCAGCAAAGAGGCTAATAGACTTGGGCCTCGTCTTCACACCAATTCAAGATGCTGTGAGAGATGCAGTTGAGAGCCTC ATAGCTAAAGGGTTCCTGGAGCTACCACCCACACAGAAATAG
Protein sequence (LotjaGi6g1v0277000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNPKTEEVVCVTGANGFIGSWLVRTLLEKHNPRYTIHATTFPSSDPTHLFTVHPEAHSRITIFPADILDSAAVSRAIHN CSGVFHVASPCTLDDPEDPHKDLIQPAVQGTLNVLEAAKRAGVRRVVLTSSISALVPNPNWPEGRAVDESSWTDVEFCES RRKWYPVSKTAAERAAWEFKEKQGGAEVVAIHPATCLGPLLQPELNASSAVLQRLMTGYRDTQEHYWLGAVHVKDVARAQ VLLFETPTAAGRYLCTNGIYQFSSFASIVSELYPDFPVHRFPEETQPGLTPCKDAAKRLIDLGLVFTPIQDAVRDAVESL IAKGFLELPPTQK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 333 | 332 | 6.2E-101 | – | |
| PANTHER | 6 | 324 | 319 | 5.3E-156 | – | |
| PANTHER | 6 | 324 | 319 | 5.3E-156 | – | |
| SUPERFAMILY | 6 | 320 | 315 | 1.62E-58 | ||
| CDD | 10 | 304 | 295 | 2.94778E-131 | – | |
| Pfam | 10 | 249 | 240 | 1.7E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi6g1v0277000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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