Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0278000 |
| Transcript ID | LotjaGi6g1v0278000.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59478230..59492338) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGTCTCTGCTGTTGAACAGCTTCAAGTCATGGCTTCAAAACGCCAATATAAAGAGGCAGCTGCACAATTGGAGGT ATCCACTCTGTCTTTACAGTATTGTTTTTTAACTGCTGCTAACTTACTGCATTGCTATTTGCCGCCAGCAGTGGATTGGT GTTTTATGTGGGTGTTGGGGGAACGGGGTAGAAAGCAAATCTATTGTGACTCTGAAGGAGTGATGGCATAATGCTATTTC TGGTTATTGTATCCGTTTGGGTCGTCTTTGTAGTTTAGGAATTGTTTCATGTAATTGGGGTTTATCTATGAGTTATTTAG GACTACCCAGTTTATTATTGAGGACTATACTGTTTAGTTGGTTAGATCATTTTGATTCTTAGTTTGGGTTGTTTCTTTTA GCATTTTGAGACTTCCAGTTCTCTATGCACACTGGTTAATCTGACTTAAATTCTTAACTTTTAAGCTTAATAATTAAATT TGAATGATAATTTTTTGTGTACATTTTTCCTAATAATTTCTGAATTTTTATCCATGCCATGGAGAAAGTAATGCCTTTTT TTTCAAGAAACTAATGTACTCTTTGTTGTTGTGCCTATTGATTTTTTGATACTGTAATCTTGAATTTCAGGCAGTGAACC AGTTATGTAGCCATTTTGAGGCCTATCGAGATATTCCAAAGATCATAGAGCTGAGGGAGAAGTTTAAGAATATCAAGCAG ATCCTCAAGTCACATGTGTCTTCTGATTTTTCGAGGTATATTGTTACTGATCTCCATCTTCTCCTGTGTTTGAAAATCTC CATGGGCACTACAGTGTCAACTGGATATACAATGCCCACTTAAATAGCTCATCTGAGTTACGTGTTTGGAGGCTTCCACC CTCCTTTGTGATTGAGCATCTATGTGAGGTGTAAGGACTTGCTAGTGTAGGGTCTTGTTTTTTTGCTGTCATCTTCCTAT GTAACCAAAGGAAAAAACCACCTTAACTATGGAAGCAGCTTGGTTCTAAAGAGGTTATATGTAACTGGGTTTCTCAATTT TCTGTTTTTGTCTCAGCTTAGGTACTGGAAAGGAGACAGAAGAAACCAATTTGTTACAGCAGTTGTCTGATGCCTGCTTG GTTGTTGATGCATTAGAGCCTTCTGTCAGGGAAGAGTTGGTAAACAATTTTTGCAATAGGGAGCTTACTTCGTATGAGCA AATTTTTGAAGGAGCCGGTGTGTTTTACTTATCTATAATGAAAATTTTGTGTTCGGTTATTCATAAAGTTTTTTCCTAAT GTCTGTAAATTTGACTTTAATTTTCTTTTTTATCACATCTTTCAGAACTGGCAAAGCTGGATAAAACTGAACGAAGATAT GCATGGATTAAGCGCCGAATGAGATCAAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATAGGCT CTGTATACTATTTTGCAAAAAGACGAGGTATGTTATTTATCTGTTCATAGAACCTTAGTATTATAAATGGTGAGTCGGTG ATAGATCTTTGAGGCCTTCTCCAGTACAAGAAGCCATGGCCATTGTGAAACATGATTACTTCTAGTTTGTTGTAAAATGT CATTTTAATATGTTAAGTGAATATTTTTTTCTGCTGCAGTTATTTAGACTTTATTTTCCGCATCTGTCTGATATTGAATT TACGACATCAAATTTAATCAAGTATCAAAATTTTGAGATGTCTTTGTTGTAGACTTCATGCGGTAACTGGTATGTTTTAC AAAAGAAAGGCGATAGAATTAAGCATTTACCAGAATATTGTGCTTTTTCATATGTACTGGACTCAGTTCAGGGTTACTAT GTACAAAAATATTATTGTTTTTATGATACTTGTCTCTACAGGAAACAACTTGAAGACATTCTTGCTAATCTAAAGGAAAA GCCAGATGTTGGGACCTTGTTGCTGGTAAGCCATCATATAGTGAGAAGCTGACATTGTTGTTATCATAATTGCTTCACAT GCTATGGTGTTATGCAGCTACATTTTTTTGCCAGCTGCCACTATTTCTCATTCCTGGGCTTTTAATTACAAAATAAATGT CGATGGTTAATTTTTCTCAGTTATGGTGGTTATTATGCATAAGTTCTCACATTATCCTGGAAACACTTGGATTTTAATGT GTTATTACAGTGTTTCGTATGTTAATTTCCTGCAGGCTTTGCAGCGAACTTTAGAGTTTGAGGATGAATTGGCTGAGAAA TTTGGGGGAGGAACTCAAAACAGAGAAGTTGCGAATGCAATTGAAGAAATAGGTCGAAGTGCTAATTCTAGCAGTAGTGC TTCTGATATCAGGAAGAAATATGAAAAAAAGCTTGCTGCGCAACAAGGAAGTGAGAGTGAAGTATGTTTTGTGAAGTGCT GAACTTGACAATATTTGTTCATAAGGACTTATTCAAATTGAATTTATCAAGTGACCACTACATTTTTCTTTTGTATCAAT AGGAGAAAGATGGAAGTAAGGATCTGGCTGTGCCTGGAGCTGGGGTATGGTTTTATATATCTGTTTTCTTATACATATAA TTGATTTTAAAGGTTAAGTGCATGTATTTACATTTGTGGTGTTTGAGGTGTTGTCATATTGACATAATTGCTTTTGGGAT TAACCTTCTCGGTTTGTCTTCCTGTCTTGCATTTTTATCATGATTATTTGATGTGGCTCTTTATCCAATAGTTCTAAGTT TGTCTCACTTGCTTAATATTTTAATCAAAAACTCAAAATGTGCTACATTACATCATGATATTGCTTAATATTCAAATTTT CAAACTAGAGTTGTGGTTATTTTATCCTGTTTTCCTTCTCAAGCAGAGCCCTGAAAATTCATGGAAAAATATGTTCTTTA TTTCAACACTTCTGTTCTTTTGACCCTAAGTCTGAACTTATATACTGAGTCTTGTCATGCAGTTGCCTCTCAGTTATTTT ATAATTGTTTCATATTTATCAACAAAATGGAAATAGGGAAATGGAAAAGCTGGAAGTACAAAATTGTAGATAAAAAATAA GTCAAGTGAGGTTGATGTAAAGAAATCAGTTGTCTCTTGGTATTTATTTTCTCTGCTGTTGGTTGTAACTATGTTTTTCT CAGAGGTGTTCTCATTTTATTCCTATTGATCTGTTTCTTTAAGACTGACCTCATAGACATTTGATTGTTTGGACAGTTCA ACTTCCGTGGAATTATTTCATCTTGCTTTGAACCTCACTTACAAGTATACATAGAATTGGAAGAGAAGACGCTAATGGAA AGTCTGGAGAAACTTGTTCAGGTAATTTGTTCTTACGTTTCCGATATCTTCTCTTTGATTTCCTTCTGTTTTTTTTCCTG GATTAAACATTTCATTTCATCCACTATAGGAGGAGACATGGGATATTGAGGAGGGAGGTCAGAGTAGTGTTTTGTCCAGT AGCATGCAGGTGTGTCACTAAACCTTTTTACATGTTATGTACTTATGCTATAGAGCACGGTAATTTACCTTTCTACCCTA TTTCACGTGTTATGTCTCTAGATTTTTGTCTTAAAGATGGTATCTGATTATTAACTGTTGCAAAAGAGTAATGTGGTTCA TAGCTTAAATTGTCCCCTACCCCGCCCTCCCCTGTTTTCTTTTTCTTTTTTTTATGACTTGTTTGTTAAGCTCGTGTTTA CATGGTTGTCTTTTGTCATTCTACACAGTTATTTCTTATAATTAAGAGAAGCCTGAAGAGATGCAGTGCTTTGACAAAGA ACCAGACACTATATAATTTGTTGAAGGTAAACTCATAAATCATAGACTTTAATATTTCTGTTTGTATAAAGTGGTCATAT GTGTAAGTTTTCTAACTTCATTTTCCCCTTTATCTGTTTTCATTTTTTTGGTGGTTGTTTTGAATCATGTCCAAATCTGT GGATTTGCTTTAAATGTCCTTCAGAATCAAACTATTGTTTCTTGTTATTTTCTATGTCAAGTTATTTGCTTTTATCAATT GAACTTCTTTAATAAAGTAAAATAAAAACAAGAGAAAAAAAAATCCTAGCTTAAATAAAGTTGAAGGATTCAATAAATGA TGTTTGTGATGAAATTTACGCTAAATAGCCCACTCTTGAGGACTAAATAGTCCTCAACTTGAAACCAACACTATTAAAAG AGCCAAACTTAGTAGGGCATCATGCAAGACTCTTAGGCTTGTGATGGTTGCTTCATGCATTTTATGATTTCATTCCTTTT CAATCTTAGGTTTTCCAAAGAATTCTTAAAGCATATGCTACAAAACTCTTTGCAAGACTCCCAAAGGGGGGCACGGGAAT TGTTGCTGCAGCCACAGGCATGGATGGACAGATAAAGGTATCTTGAAAGGAATTGAGTTTTCATTATATGTGAGAATATT CATGTTATCAAAGAACTCTCTCTCTCTCTCTGTTTTTAATCTTTGGAAATGTTGAACAGACATCTGATAGGGATGAAAGA GTGATTTGCTATATTGTCAACTCAGCCGAATATTGCCACAAAACGGTTAGTTTCTTTATCATTTCTTCATGCAGTTAATA ATGAGTAAATACCGGTTTTGCAAAACTTTTGCTAACTAGCTTTGTACTTGTCAGGCTGGTGAACTAGCTGAAAGTGTTTC TAAAATTATTGATCCTCAATTTGCAGATGGGGTGGATATGTCAGAAGTACAGGTAATAATGTCTTTTGATAAATAATGTT CTTTTCAACAGCTCTCTTTCTTATGGAGCTATGCAATTATGCAGGATGAATTTTCAGCTGTTATAACTAGATCATTGGTA ACCTTAGTGCATGGCCTGGAAACCAAATTTGATATTGAAATGGCTGCGATGACACGCGTTCCATGGGGTACGCTTGAAAG TGTTGGCGATCAATCAGAGTAAGCTGAACTCCTTAATAAATCTTAACTATTATTCTTATTCTTATTCCTGACAAAGATCC AAAGTTTAATTGTACAATTTTTCTTGCAGATATGTTAATTCTATAAATTTGATTCTAACCACTAGCATTCCTACACTTGG AAGTCTTCTTTCACCTCTATACTTCCAGTTTTTTCTTGACAAGGTGATCGACTATAAAATTCATTAAATACATGAAACTG TGTTTTTTTAAATCAACCTTGGTGTTGAGGGTATTTTCTTTTCTAGCATTAGTTATAGTTCTATAATTAATGTAAGTATA CATTGATTTTTTTGTTTTAAATAACTATTTCTGATGAAAATGCCATTGTATTAGTTCATATTCATCTTCAACAGTGTTTG TGGCATGACAATTTTTGCTTATTCTGGGAGCATTTGTGAATGTTTATCTATTGCATATTAATATTTTTCTAAGTTTCAGG CTTCTGACTCAAGTCCAGTCAATTTTCACCTATACTGCGTTTTTCTGTTATGAAAATTTACTAAATTTTAGTTTTGATAA CATCTCCTATAGTTCATCAATTTAATCATCCGTAATTATTCATATGGTATTTAGTTGTCTGCTTTAAATCTGTTCTTACA TTTATTATCTGCAGCTTGCATCATCTCTCGGTCCACGCTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACT GGAGCTCAGCAGGTACTGACTGCTTTTTTGTTTATCCTTATAACATTAAGAGTAAAGTCACAGAACTTAACTTCAGTGGG AAAGAGGAAGGAGGGTTAAGTACTGTACGAGTGGAGGTTAAGATATGCTCCAAAAAACCCAAAATTCAAAATACAAAAGG AACAAAAAGAAGGAAAACGAGTGAAGCAAGTCTTTTTTTTAATCAAAAGATGAATTTTCTATCATCAAATTGGGATAAAT CTATCTCTGTCCAAAAAGCTAGCTCATAAGGTAAAGATTGCCCAAGCATTTTTATGAGCTCTACTTTGGTCATATCTCTC TAGTTGATGTGGGATCTCAAGTTCTCAACACACCGCTTTCACACTTAGAATTGGATATCTGGAGCATGGAGATTAAGACT GTTTTTTTTAGTATTTTTACTGCAATGGTTAAGTTAATTGTAGTGGGAAAGTCGGAGGGCCAGGTTGATTTTTGGACAGC TGTGGATGAACCAATATCAGATCTCGGGTGGGCTCCATATGAAGTTTGGGCGGTCTAACTTTACTTCAAAAACTAACTCG GGAAGTGAAGATTGCCCAAGCCTTTATAAACTCTACTTTGACACATCTCTAGTAGATGGAGGATCTAATCAGCCCACCAT CTGATTTAGGGGAGAGTCCTGAATAAATAAAATTTTGGATAAATCCTAACTATGAAATATTTTTGACATTGTGACAAGTG TCCTTTGCTTCCTGTCGCAAGCAAACAGGTTATTGAGGATGTGTTGAAACTAATGCAATAATATTTAGCTTGTATTTACT ATTTTTGTTACTTTGAACCGCTTTCCGTACTTTGGGCTTCGAGACCAACTTGCTTTTTCATTGTTGATTTTTTTATTATA ATCTGTTTTCTGAGGAGCTCATTGGAACCTTATTAATGTAGTTGAGGAACTAATAAAGTGATTTCTGCAGATGCTTTTGG ATACACAAGCTGTTAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGGTGAACTAGCTCTTGCCTATATTAATT GATGTCACTAATAGTACTGCTTAAAATACAATAAAAATTATCGCCATCACATAACTTGTGATGGTGTGGCCTCTCTTGCT CTCTCCCTGTTGTAGTTTGTACCTAGTGAATCTAACATCTCAATTTCACATTTTTAGGGGATTTTTGTTGGGTTGTGGTG CAAATTCTTTTTTTTACCAGAAGCATTTAAATATTTTCTTACTCTAATTCCGGGATGGACAGTATTTGTTGTTAGTAAAG CTTTAAAGGAAAAATAGACATACTTATCTGGATTATGATTTGATATTTTAGAAAATCAAGCTGAATCAGAAATTAAACAA GCTTTCAGCTTTTGCTGGTTACTGTTGAAAACTCTATTCTATGAATCTCATTCTCATTGATTTTCAAAGTTACTGAATAC AAGAGTGAATACAGTTTATATAATGAACACTCTAGCTTGTCAATCAAGCTAACCAATCTTCACAAACTCTAACAAATGCA GTTATGACAACTCAGCATGACAGCTAAGCAAAACTAACTATGACAGCTAGCATAACTAACTCTAAGGCTGACTGTATACA CAGTCAGCAGCTACTTAATAGTAGCTTCTACTACACGGTATGAGATGTACTCTAATAGACCCCCTCAAACTCAAGGTGGG TGAGAAGGAACTTTCTCAATCACATTAAGTTTGGAACGAAGAAGCTCAAACCGGGTAGGAGAGAGGGCTTTAGTGAAGAG ATCTGCTAGCTGATCCTCGGAAGGAATGTGATGAACAAAGAGTGACTTGGCAAGAACTTTCTCCCGCACAAAGAAGATAT CAAGATCCATATGCTTAGTTCTGGTGTGAAGAACCGGACTATGAGTAAGAGCAACAGCCCCCATATTATCACAGAACACT CTTGGAGGAGTAAAGGGAACTTGAAGTTCCTGTAACAAGGATTGAACCCAAAGTAACTCTGCTGAGGTATTGGCCAAGCT GCGGTATTCAGCCTCTGTGCTAGACCTAGCCACCAAGGTCTGCTTCTTGGAGCTCCAAGAGACTAGATTGGGACCAAAAA AGACACAAGTCCCTGAGGTTGATCGTCTGTCATCAGGATCTGATCCCCAGTCAGCATCACAAAAGGCAACAAGGGGAACA GAAGTATGCAAGGAACAAGGTCTAAGATGAAGACCATGATGTAAAGTGCCTTTGAGATACCTAAGTATGCGGTTCACTGC CTTCCAATGATCTTCCAAGGGCTGACTGAGAAACTGACACACTTTATTTACAGCAAAACTAATTTCTGGTCTTGTCAAAG TAGCATACTGCAGTGCACCAACAATTGATCTGTATAGAGTAGGATCTGCAAAATAGTCTGAGCCATATTTGCTTAGCTTG GCACCTCCAATCATGGGAGTAGAAATGCCTCTAGCATCCCCCATTTCTGCTCTCTCAAGTAAATCAGTAATGTACTTTGT TTGAGTTAAAAGTAAAGACTGATCCTTCAAGTGATGAACCTGTACTCCCAAGAAATAATCAAGCTGCCCCAATTGCTTCA AAGAGAACTCTGAATCAAGGTTCTGAACCACTTGCTGAACCTGAGGCAGTGAATTGCCAGTGATGATAATGTCATAAACA AGAATGTAGATGCAGCACCCTTTAGTGTAAAATGTGAACAAAGAAGGATCACATTTGCTAGGAGCAAAACCATACTTTAC TAGGGCTGCTCGCAGCCTCTCAAACCAAGCTCTTGGAGCTTGTTTGAGGCCATAGAGAGCTTTGTGCAGCTTGCACACAA GAGACCTATCTGCACATTGAAAACCAGAGGGTTGAGTCATATAGACTTCCTCTTGAAGTGCCCCATTGAGAAAGGCATTA TTCACATCAAGCTGATGAATGTGCCACTTCTTAGTGATGGCCAATGTGAGGATAATGCGAATAGTTATAGGCTTCACCAC TGGAGAAAAAGTTTCAGAATAGTCAAAACCTTTCACTTGATGATAACCCTTGGCTACCAACCTTGCCTTGTATCTATTGA TGGTCCCATCTGGATTCTCTTTAATCCTGAATACCCATTTACAGCCAATAGGCTTCCTATCCTTAGGAAGAGGGACCAAA GTCCAGGTATCATTAGCCATTAAAGCATCATATTCTGCCTGCATAGCAGCTTTCCACTTAGGATCCTTAAGAGCTTGAGT AGAGGTTGTAGGTTCTGCCTGTGTGAGAAGTAAAGTAGGAAACAACCTTTGCATAACAATGCCAGACTTTGCCCTTGTTT GCATGGGATGAACATTCCCAATAGGCTGAGGAATAGCTCCAGTAGAAGACTCTGAGTGATTGTCCACTTGGTTGGCTGAA CCAAAAGATGAGGCAGGCATAGAGGAGGGACTAAGCTGCTGTTGTACTGAAAAGTCACTATGATGACTAGCCTCTGAAGG TGAGGCAGAAGCTGCAGGAGGGTGTGAAACAGTAGCAGCAGGTTGCTCAGCAGTCACAATAGTAGGAACAATAGAAATAA CTGAAGAAACACATTGGTCAGAACCAACAGCCTCAGAAGAGGGAAACAGAAGAGGGAAACATATGAGAGTATGGGAAGTT GAACTCATCAAAGACCACATCTTTTGAGACATAGATCTTACCCTCATTGTCCATACACTTGTAACCTTGATGTTGTGAAG AATATCCCAAGAACACACATAGCTTAGATCTGAGAGACAGCTTAGAGTGTGTATAAGGCCTTAAATGTGGATAACAAGCA CAACCAAAAACCTTAAGCAGGTTGTAGTCAGGTTGTGTGTTAAAAAGCTTGAAATGTGGACTCATGTTGCCTAAAACTGA GGTAGGTAATCTGTTAATAAGAAAAACAGCTGCTAGAAAGGCATGATCCCAAAACTGATATGGCAAATGAGCATGTGCTA GCAAGGAAAGACCAGTCTCAATAATATGGCGATGCTTTCGTTCTACACTACCATTTTGATGATGTGTATAGGGACAAGTT AGTCTATGAACAATCCCTAATTTTGAAAAATAGGGTGTGAGTGGTTTGAACTCTGTACCATTATCAGTTTGTACAGACTT AAGTTTCATGTTAAATTTCAACTCAACCATAGCTTGAAACTGGAGAAAAACAGAACATGTATCAGACTTCTTTCTCATTG GAAAAATCCAAGTGAAACGAGAGAAGGCATCCACACAAGTGAGAAAGTAAGAGAAACCACAAGAAGATTCAATAGAAGCA GGCCCCCATAGGTCAGCAAAAACTAGTTCCAAAGGTAAAGTATAGACAGTATTAGAAGAATGAGAAGGCAATCTATGTGA TTTGGAAAGACAACATGCTGAACAAACAGTGAACTTTGTTTTATTAGGTACTAGAATATTACAAGAAATTAAAGCTGAAT GTAAAGCCTCATGATGAGGATGACCTAGTCTAGAGTGCCATAAACCATAAGAGGTTGGGCTTACAATAGTAGATGACTTG TTACTAGAACTAGGAACAGTAGAACTAGGTAAAACAGCTGACAAGGCAGAAACTGAGTCTGAAACAGCAACTGGAGGCAA GGAATTTGGAACGTGAACAGAAGATCTCTTGGAAAGAGAAGGAGTGTGCATGCCTTCAAAGACATACAAGCCATCTGGAC CAACATGACCTTTAAGAAGAACCCTAGAGGTGACCTGACATTTCACAACACAAAAAGAGGAGTGAAACTCAAAGTAAACA TTATTATCTCTTGCAAATTTACTCACACTAACCAGATTTTTGGTTATATCAGGAACTAAAAGCAGATTTTTGAGAGTGAG TGTGGTGTTAGTATGATAGGGAGAGGGAAAGGAAGCAGATCCTATACAGAGGATTGGCAAACCTTGTCCATTCCCCATGA AGATGTGATCATTACCAGCAAGAGAAACACTATCTGAGACAACTGATGCATCATTAGTCACATGGTGAGTTGCACCAGAA TCAGGGAACCAAGTGCTCAGATTTGCTGAAGCAGAAGAGCCTCCTGCTTGTGATGGACCTGTGATCATAGCTTGAGGTGG TCTTGCATTGTAATTCCCAGGTCTGTGCCCTCCACTTGTGAACTGAGAAGAGGATGAATTATTCCAAGGTGTACCAGCAA AAGGATGAAAACCAAACTGCGGAGGACCAAAAGGAAATCCTGGAAAAGAAGAACCAGGTCCAGAGTATTGCTGTTGTCCA AACTGAGTTGGATTTCCAAACTGAGGAGAACCACAGTAAGGAGAGAAACCAAACTGAGGCATAGGAACCATAGGGAAATT AGGAAATTGCACTCCATAACCTGAGTTCATGCCAAACATGCCAGTAGAAGGAGTGGAAGATGCACGATGATAGCAGATAC TGGCATCATGACCATACTTCTTGCAGATCTGACATTGCACACTGCGATTGTTGCCTCTGCCTCCGCCACGTCCATTGTAG CCACCGCGAGAGTTGTTGCCTCCACCACGTCCATTGTAACCACCACGACCACGCGAATAAGAGAAACCACTGCGCTCATC ACCGCGCTCATCAAAGGAGCGCTCCTCATAGGAAGAATCGACGGAGCTGGAAGCATAATTTGCCTCAGAAGGCACCGGCG AAGGCGCCGACGGTGGAGGTTGCGTCGCTGGCGGCGGCGAAGCCTGCGTCAGTAGCGCCAATGGAGGATTCGCAGTAATC TGACGAGATCGAGCTCGATCTAGCCGCGCTTCATGAGCGATAATCATCGCTTCGATCTGCGAGATTGAACTCGGTGTTTC ACGATTATAGACAATCGTTTGGAGATGACTGTAATCCTCTGGCAAACCATCAAAAATTGCTTCCAATTGTTCACGATAGG AGATTGGATCTCCAATAGTGATCAACGCATTAACAATCGACTTGATACGTTTGAGATACTCGGAACACGACTTCGATCCC TTGGAGATGGATCGAATTTCAGATCGCAATTGCGTTGACTGTGCGAGAGAGTGTGCTTGGAAGAAATCGAGCACTGCCTC CCACACTTGCCACGACTGAGAACAGTTCACCACCGTAGGAAGCACCGATGGCGAAAGAGACGAGAGTAACCACGTGAACA GAGCAGAGTCTTGCTGCTCCCAGATTTGATATGCAGGATTCTCCACTGCATTCACACGATCTTCTTCACTGAGAAATCGT GGTGGAATCTCAGGACAAGCAAGATAACTCTGCAATCGATGCGTACGAACGATCCCTTCCACATGCTGCTTCCATGAAAG GAAATTCGTATCATCAAGCTTCAGTGAAAGCTTGTGAACAAGAGTTGAGGAACTCAACTGTGGTTGAGCCACTGCAACTG GAACCGGAATCGGAATCTCAGGAACTTCTTCAGCCATGGTGAAGAAGATGAAGAAGAAAAATTTGAGAAGAGAGACCTCA AGGATCGTACCCTGCTCTTGATACCATGTTGAAAACTCTATTCTATGAATCTCATTCTCATTGATTTTCAAAGTTACTGA ATACAAGAGTGAATACAGTTTATATAATGAACACTCTAGCTTGTCAATCAAGCTAACCAATCTTAACAAACTCTAACAAA TGCAGTTATGACAACTCAGCATGACAGCTAAGCAAAACTAACTTTGACAGCTAGCATAACTAACTCTAAGGCTGACTGTA TACACAGTCAGCAGCTACTTAATAGTAGCTTCTACTACACGGTATGAGATGTACTCTAATAGTTACCCTTTCCCACTTGT ATTATATTTTATCGCACTGAAAGAATCTACTTTACAAGCGGTACTGATGCACAATATCTATCAGTATAAACTATTTCTAC TTTATTGCTGAAATCTTGAGCTAGAATGGTGAGAAAATAACTGGTTGCTTGATATTCTAAATTACTTGTACACTAACAAG GAAACAATAATGGACTGACTATCTGGACCAAACAGCTATGTTGTCTCACGTAAAGTTATAAACTATATTCCACCGCCTAG ACTAAAGATCTCCTTCCAGGAATCTAAAATCTTTACAACTCACCTTTGTCAATTAAATACTGAAAACAATATAATTCTGT TTCCATTTCTAATTGTTGTTGTGTTCTTTTCACCGGTTTATTTCATTACACTAACTGATTGCTTATTTTTGCGACAGACA TCAGGTGCTGCTAGTTATTCCAAGTTCGTAAGCCGTGAGATGAGCAAAGCTGAGGCTCTTTTGAAGGTTTGTTGTCTATT TATTACCAAAAAATTTGTGTAATAATAATTTAGTTTGTTTTGATTAGGTTATTTTGTTTTCAAAACATTTTAGAATCAAA ATCTGATAGAAGGAATTTTGAAAAAAAAAGATTATTCCCTAAGGCTGCATTTGATGCATGCTGAGAGACAGGATAAGTAG AAGAACACATTACAAATAGTTTAATTACATCATCACAATTTTTTTTTCTGTTTGGTCTTTGATGATTGAAGCACAGCACA AGTAATTTTAAGGGAGATAAGGAGAAAAACCGAAAAAATAATGGAGGAGAGTTGAAGGAGAGAAGGGTTATTGAGAATAG GAAAACAAGTTGGGTATTTTTCACTTTTAGATGTTCAAAAAGTTGTCTCGGTTCATTAACGAGTTTTTGAAACTTTTGGC TTATGCTTCATCTTTTGTTTTATTCTGTCTCCTACTGTTTAAAAATCAAATATAGAACAGGTAATTTTTGTAGCAAATAA CCAAACATGCACTTGGTTCCTTCTGATTCAAGTTTGTGCGGTTATCTCTATGTATTAGGTTATACTTTCTCCAGTTGATT CTGTAGCAGATACCTACCGTGCATTGCTACCTGAGGGTACACCCATGGAATTTCAGCGAATATTGGAGCTTAAGGTTATA ATTAATATTTCTTGCTAGTTCTTCTATCAATTTCTCTAGTTGGTTGATTAATTGTTCATGCATTATTTCTTTGTTCTGGA CCTCTGATCATTGAGATAAAGTACACTGGGCTATATAATGTTCTCTATTGCTGATGTTACAAACCTTGCCGTAATTCTCA TTGCTAAAGTATTGGATTATAAGAAGATACAGATTTGATTGCTGAAGAGATGAGATTGATGAGCACCATCTAATGTCTAA ATCAGACAGATGATGTAAAACAAAAAAAAAAATTATGATCCATTTCTTAATAAGCAATTGATATTCATTTAAGTTAAAAT TTATGGTCATGATTTGTAAGTTATGCTTCCTATTGGAATGACTTATGCCTTGTGTTTTCAGGGTCTCAAAAAAGCTGATC AACAAAGCATACTAGATGACTTCAACAAACATGGACCTGGCATTAAGCAAACTCAGGTTTCGCCTGCAATTGTACCTGCT CCACCTGTAGCTCCTGTGGTACCTAGCCCCGCAGCTGTCGGACTCGTCGCTTCCCGGGAAGATGTTCTAACTAGGGCGGC TGCTCTTGGACGTGGAGCTGCCACCACAGGGTTCAAGCGGTTCCTAGCTCTAACCGAAGCTGCCAAAGACAGGAAGGATG GGCCTTTCCGAAAGCTTTTTAATCCGTAA
CDS sequence (LotjaGi6g1v0278000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGTCTCTGCTGTTGAACAGCTTCAAGTCATGGCTTCAAAACGCCAATATAAAGAGGCAGCTGCACAATTGGAGGC AGTGAACCAGTTATGTAGCCATTTTGAGGCCTATCGAGATATTCCAAAGATCATAGAGCTGAGGGAGAAGTTTAAGAATA TCAAGCAGATCCTCAAGTCACATGTGTCTTCTGATTTTTCGAGCTTAGGTACTGGAAAGGAGACAGAAGAAACCAATTTG TTACAGCAGTTGTCTGATGCCTGCTTGGTTGTTGATGCATTAGAGCCTTCTGTCAGGGAAGAGTTGGTAAACAATTTTTG CAATAGGGAGCTTACTTCGTATGAGCAAATTTTTGAAGGAGCCGAACTGGCAAAGCTGGATAAAACTGAACGAAGATATG CATGGATTAAGCGCCGAATGAGATCAAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATAGGCTC TGTATACTATTTTGCAAAAAGACGAGGAAACAACTTGAAGACATTCTTGCTAATCTAAAGGAAAAGCCAGATGTTGGGAC CTTGTTGCTGGCTTTGCAGCGAACTTTAGAGTTTGAGGATGAATTGGCTGAGAAATTTGGGGGAGGAACTCAAAACAGAG AAGTTGCGAATGCAATTGAAGAAATAGGTCGAAGTGCTAATTCTAGCAGTAGTGCTTCTGATATCAGGAAGAAATATGAA AAAAAGCTTGCTGCGCAACAAGGAAGTGAGAGTGAAGAGAAAGATGGAAGTAAGGATCTGGCTGTGCCTGGAGCTGGGTT CAACTTCCGTGGAATTATTTCATCTTGCTTTGAACCTCACTTACAAGTATACATAGAATTGGAAGAGAAGACGCTAATGG AAAGTCTGGAGAAACTTGTTCAGGAGGAGACATGGGATATTGAGGAGGGAGGTCAGAGTAGTGTTTTGTCCAGTAGCATG CAGTTATTTCTTATAATTAAGAGAAGCCTGAAGAGATGCAGTGCTTTGACAAAGAACCAGACACTATATAATTTGTTGAA GGTTTTCCAAAGAATTCTTAAAGCATATGCTACAAAACTCTTTGCAAGACTCCCAAAGGGGGGCACGGGAATTGTTGCTG CAGCCACAGGCATGGATGGACAGATAAAGACATCTGATAGGGATGAAAGAGTGATTTGCTATATTGTCAACTCAGCCGAA TATTGCCACAAAACGGCTGGTGAACTAGCTGAAAGTGTTTCTAAAATTATTGATCCTCAATTTGCAGATGGGGTGGATAT GTCAGAAGTACAGGATGAATTTTCAGCTGTTATAACTAGATCATTGGTAACCTTAGTGCATGGCCTGGAAACCAAATTTG ATATTGAAATGGCTGCGATGACACGCGTTCCATGGGGTACGCTTGAAAGTGTTGGCGATCAATCAGAATATGTTAATTCT ATAAATTTGATTCTAACCACTAGCATTCCTACACTTGGAAGTCTTCTTTCACCTCTATACTTCCAGTTTTTTCTTGACAA GCTTGCATCATCTCTCGGTCCACGCTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACTGGAGCTCAGCAGA TGCTTTTGGATACACAAGCTGTTAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGACATCAGGTGCTGCTAGT TATTCCAAGTTCGTAAGCCGTGAGATGAGCAAAGCTGAGGCTCTTTTGAAGGTTATACTTTCTCCAGTTGATTCTGTAGC AGATACCTACCGTGCATTGCTACCTGAGGGTACACCCATGGAATTTCAGCGAATATTGGAGCTTAAGGGTCTCAAAAAAG CTGATCAACAAAGCATACTAGATGACTTCAACAAACATGGACCTGGCATTAAGCAAACTCAGGTTTCGCCTGCAATTGTA CCTGCTCCACCTGTAGCTCCTGTGGTACCTAGCCCCGCAGCTGTCGGACTCGTCGCTTCCCGGGAAGATGTTCTAACTAG GGCGGCTGCTCTTGGACGTGGAGCTGCCACCACAGGGTTCAAGCGGTTCCTAGCTCTAACCGAAGCTGCCAAAGACAGGA AGGATGGGCCTTTCCGAAAGCTTTTTAATCCGTAA
Protein sequence (LotjaGi6g1v0278000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVSSDFSSLGTGKETEETNL LQQLSDACLVVDALEPSVREELVNNFCNRELTSYEQIFEGAELAKLDKTERRYAWIKRRMRSNEEIWKIFPSSWHVSYRL CILFCKKTRKQLEDILANLKEKPDVGTLLLALQRTLEFEDELAEKFGGGTQNREVANAIEEIGRSANSSSSASDIRKKYE KKLAAQQGSESEEKDGSKDLAVPGAGFNFRGIISSCFEPHLQVYIELEEKTLMESLEKLVQEETWDIEEGGQSSVLSSSM QLFLIIKRSLKRCSALTKNQTLYNLLKVFQRILKAYATKLFARLPKGGTGIVAAATGMDGQIKTSDRDERVICYIVNSAE YCHKTAGELAESVSKIIDPQFADGVDMSEVQDEFSAVITRSLVTLVHGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNS INLILTTSIPTLGSLLSPLYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTILLEIPSLGRQTSGAAS YSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQSILDDFNKHGPGIKQTQVSPAIV PAPPVAPVVPSPAAVGLVASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 304 | 304 | 3.3E-97 | ||
| PANTHER | 1 | 688 | 688 | 1.8E-261 | ||
| Coils | 162 | 182 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | GARP complex | A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles. | ||
| Biological process | Retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
Expression pattern of LotjaGi6g1v0278000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…