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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | GARP complex | A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles. | ||
| Biological process | Retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: vacuolar protein sorting-associated protein 53 homolog [Cicer arietinum] gi|502079927|ref|XP_004486410.1| | 3 | ||
| – | PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 1 [Glycine max] gi|356532932|ref|XP_003535023.1| | 3 | ||
| – | PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 2 [Glycine max] gi|356532934|ref|XP_003535024.1| | 5 | ||
| – | PREDICTED: vacuolar protein sorting-associated protein 53 homolog isoform 1 [Glycine max] gi|356532932|ref|XP_003535023.1| | 5 | ||
| – | PREDICTED: vacuolar protein sorting-associated protein 53 homolog [Cicer arietinum] gi|502079927|ref|XP_004486410.1| | 4 | ||
| – | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 | 5 | ||
| – | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 | 5 | ||
| – | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 | 5 | ||
| – | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|A0A0R0I8J4|A0A0R0I8J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0278000 | 5 | ||
| – | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 | 5 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR12820 | PANTHER | 1 | 10.00 |