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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0278000 |
| Transcript ID | LotjaGi6g1v0278000.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar protein sorting-associated protein 53 like; TAIR: AT1G50500.4 Membrane trafficking VPS53 family protein; Swiss-Prot: sp|Q0WQF4|VP53A_ARATH Vacuolar protein sorting-associated protein 53 A; TrEMBL-Plants: tr|G7IFQ6|G7IFQ6_MEDTR Vacuolar sorting-associated-like protein; Found in the gene: LotjaGi6g1v0278000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59478230..59493537) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACAAGTCAAGCGCTCTGGAGTACATCAACCAGATGTTCCCAAACGGTATACATCTCCATCGATTTCAATTCAATTG AACGCTCTGTGTAGTTAACCACTGTGTTCTATGATTTCTCACATTTTGTTACTCTGCAGAAGCATCGCTATCTGGTGTTG AGCCACTCATGCAGAAAATCCAGAACGAGATTCGGACTGTTGATGCTGGAATCTTATCTGCTGTTCGCCAACAGGTAAAA AACTGTTCACCATTCAGCATAATTTGTTTCCACAATTTTCCGCTGATGCCTCTCCTTCTCTTATTTCAGAGTAATTCAGG AACCAAGGCGAAAGAAGATCTCGCTGCCGCTACGTGTGCCGTTGAGGTATGTCTGAGACTCTGAGCTTGTGAAGTAGTTG TTTGCTTTGAAGCATGCCTTGTTTTGGGGGTGTTCAGTGTGTATTTTTAAGCATTATGGTTTTCATAATGCAGGAACTTA TGTATAAGATTCGAGAAATAAAAACTAAAGCTGTACAGAGTGAAACGATGGTTCAAGAAATATGTCGTGACATTAAGAAA TTGGACTTTGCAAAGAAGCATATAACTACCACTATCACTGCGCTCCATCGTCTTACGATGCTTGGTAAGTCTTGGTTCTT TAGGTTGCTAGATTCAGCATTTCAGGATTTGTAGCTCTAGTTCTTTAGATATGTTGATTAGCTTGAACAAGTCTAGTTCT GTAGAAACACAATTAGATGGTGTATAATTATGTTTGTTTATAATCTTGTCATTTCGTGGAATATAGTTGTCTAATTGGAA ACATGCGTAATCTATAAATTACTAAAAAAATGCTGACTTTTGAGGATTATTACTTGACTAGAGACGGGATTGGTATGATT TAACCAACTTTGCTTATACACCATTTTAATTATTTTACCATAAACATTCAGACATCATACAATTCTCCATAATCGACTAC AGAAAACAACTGCCAAGTGAGGATGCAATTGCACATGTATTTCTGTATTTGAAACATTAGCACTAGTGAGCCATTAGACC ATTTTTCTGATACAAATGTTTAAACTAAGTGGTGCAATTTTAGCTTACTATTTCTAAATGAGAAATGTACATCTATTCTA TAGGTTTGTTACATAGTTGATAATTTTTGAAATGTATAGATTTTTTAAATATTTTTACTTCAACAAGCTTACCTATCATA TGGCAGTCTCTGCTGTTGAACAGCTTCAAGTCATGGCTTCAAAACGCCAATATAAAGAGGCAGCTGCACAATTGGAGGTA TCCACTCTGTCTTTACAGTATTGTTTTTTAACTGCTGCTAACTTACTGCATTGCTATTTGCCGCCAGCAGTGGATTGGTG TTTTATGTGGGTGTTGGGGGAACGGGGTAGAAAGCAAATCTATTGTGACTCTGAAGGAGTGATGGCATAATGCTATTTCT GGTTATTGTATCCGTTTGGGTCGTCTTTGTAGTTTAGGAATTGTTTCATGTAATTGGGGTTTATCTATGAGTTATTTAGG ACTACCCAGTTTATTATTGAGGACTATACTGTTTAGTTGGTTAGATCATTTTGATTCTTAGTTTGGGTTGTTTCTTTTAG CATTTTGAGACTTCCAGTTCTCTATGCACACTGGTTAATCTGACTTAAATTCTTAACTTTTAAGCTTAATAATTAAATTT GAATGATAATTTTTTGTGTACATTTTTCCTAATAATTTCTGAATTTTTATCCATGCCATGGAGAAAGTAATGCCTTTTTT TTCAAGAAACTAATGTACTCTTTGTTGTTGTGCCTATTGATTTTTTGATACTGTAATCTTGAATTTCAGGCAGTGAACCA GTTATGTAGCCATTTTGAGGCCTATCGAGATATTCCAAAGATCATAGAGCTGAGGGAGAAGTTTAAGAATATCAAGCAGA TCCTCAAGTCACATGTGTCTTCTGATTTTTCGAGGTATATTGTTACTGATCTCCATCTTCTCCTGTGTTTGAAAATCTCC ATGGGCACTACAGTGTCAACTGGATATACAATGCCCACTTAAATAGCTCATCTGAGTTACGTGTTTGGAGGCTTCCACCC TCCTTTGTGATTGAGCATCTATGTGAGGTGTAAGGACTTGCTAGTGTAGGGTCTTGTTTTTTTGCTGTCATCTTCCTATG TAACCAAAGGAAAAAACCACCTTAACTATGGAAGCAGCTTGGTTCTAAAGAGGTTATATGTAACTGGGTTTCTCAATTTT CTGTTTTTGTCTCAGCTTAGGTACTGGAAAGGAGACAGAAGAAACCAATTTGTTACAGCAGTTGTCTGATGCCTGCTTGG TTGTTGATGCATTAGAGCCTTCTGTCAGGGAAGAGTTGGTAAACAATTTTTGCAATAGGGAGCTTACTTCGTATGAGCAA ATTTTTGAAGGAGCCGGTGTGTTTTACTTATCTATAATGAAAATTTTGTGTTCGGTTATTCATAAAGTTTTTTCCTAATG TCTGTAAATTTGACTTTAATTTTCTTTTTTATCACATCTTTCAGAACTGGCAAAGCTGGATAAAACTGAACGAAGATATG CATGGATTAAGCGCCGAATGAGATCAAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATAGGCTC TGTATACTATTTTGCAAAAAGACGAGGTATGTTATTTATCTGTTCATAGAACCTTAGTATTATAAATGGTGAGTCGGTGA TAGATCTTTGAGGCCTTCTCCAGTACAAGAAGCCATGGCCATTGTGAAACATGATTACTTCTAGTTTGTTGTAAAATGTC ATTTTAATATGTTAAGTGAATATTTTTTTCTGCTGCAGTTATTTAGACTTTATTTTCCGCATCTGTCTGATATTGAATTT ACGACATCAAATTTAATCAAGTATCAAAATTTTGAGATGTCTTTGTTGTAGACTTCATGCGGTAACTGGTATGTTTTACA AAAGAAAGGCGATAGAATTAAGCATTTACCAGAATATTGTGCTTTTTCATATGTACTGGACTCAGTTCAGGGTTACTATG TACAAAAATATTATTGTTTTTATGATACTTGTCTCTACAGGAAACAACTTGAAGACATTCTTGCTAATCTAAAGGAAAAG CCAGATGTTGGGACCTTGTTGCTGGTAAGCCATCATATAGTGAGAAGCTGACATTGTTGTTATCATAATTGCTTCACATG CTATGGTGTTATGCAGCTACATTTTTTTGCCAGCTGCCACTATTTCTCATTCCTGGGCTTTTAATTACAAAATAAATGTC GATGGTTAATTTTTCTCAGTTATGGTGGTTATTATGCATAAGTTCTCACATTATCCTGGAAACACTTGGATTTTAATGTG TTATTACAGTGTTTCGTATGTTAATTTCCTGCAGGCTTTGCAGCGAACTTTAGAGTTTGAGGATGAATTGGCTGAGAAAT TTGGGGGAGGAACTCAAAACAGAGAAGTTGCGAATGCAATTGAAGAAATAGGTCGAAGTGCTAATTCTAGCAGTAGTGCT TCTGATATCAGGAAGAAATATGAAAAAAAGCTTGCTGCGCAACAAGGAAGTGAGAGTGAAGTATGTTTTGTGAAGTGCTG AACTTGACAATATTTGTTCATAAGGACTTATTCAAATTGAATTTATCAAGTGACCACTACATTTTTCTTTTGTATCAATA GGAGAAAGATGGAAGTAAGGATCTGGCTGTGCCTGGAGCTGGGGTATGGTTTTATATATCTGTTTTCTTATACATATAAT TGATTTTAAAGGTTAAGTGCATGTATTTACATTTGTGGTGTTTGAGGTGTTGTCATATTGACATAATTGCTTTTGGGATT AACCTTCTCGGTTTGTCTTCCTGTCTTGCATTTTTATCATGATTATTTGATGTGGCTCTTTATCCAATAGTTCTAAGTTT GTCTCACTTGCTTAATATTTTAATCAAAAACTCAAAATGTGCTACATTACATCATGATATTGCTTAATATTCAAATTTTC AAACTAGAGTTGTGGTTATTTTATCCTGTTTTCCTTCTCAAGCAGAGCCCTGAAAATTCATGGAAAAATATGTTCTTTAT TTCAACACTTCTGTTCTTTTGACCCTAAGTCTGAACTTATATACTGAGTCTTGTCATGCAGTTGCCTCTCAGTTATTTTA TAATTGTTTCATATTTATCAACAAAATGGAAATAGGGAAATGGAAAAGCTGGAAGTACAAAATTGTAGATAAAAAATAAG TCAAGTGAGGTTGATGTAAAGAAATCAGTTGTCTCTTGGTATTTATTTTCTCTGCTGTTGGTTGTAACTATGTTTTTCTC AGAGGTGTTCTCATTTTATTCCTATTGATCTGTTTCTTTAAGACTGACCTCATAGACATTTGATTGTTTGGACAGTTCAA CTTCCGTGGAATTATTTCATCTTGCTTTGAACCTCACTTACAAGTATACATAGAATTGGAAGAGAAGACGCTAATGGAAA GTCTGGAGAAACTTGTTCAGGTAATTTGTTCTTACGTTTCCGATATCTTCTCTTTGATTTCCTTCTGTTTTTTTTCCTGG ATTAAACATTTCATTTCATCCACTATAGGAGGAGACATGGGATATTGAGGAGGGAGGTCAGAGTAGTGTTTTGTCCAGTA GCATGCAGGTGTGTCACTAAACCTTTTTACATGTTATGTACTTATGCTATAGAGCACGGTAATTTACCTTTCTACCCTAT TTCACGTGTTATGTCTCTAGATTTTTGTCTTAAAGATGGTATCTGATTATTAACTGTTGCAAAAGAGTAATGTGGTTCAT AGCTTAAATTGTCCCCTACCCCGCCCTCCCCTGTTTTCTTTTTCTTTTTTTTATGACTTGTTTGTTAAGCTCGTGTTTAC ATGGTTGTCTTTTGTCATTCTACACAGTTATTTCTTATAATTAAGAGAAGCCTGAAGAGATGCAGTGCTTTGACAAAGAA CCAGACACTATATAATTTGTTGAAGGTAAACTCATAAATCATAGACTTTAATATTTCTGTTTGTATAAAGTGGTCATATG TGTAAGTTTTCTAACTTCATTTTCCCCTTTATCTGTTTTCATTTTTTTGGTGGTTGTTTTGAATCATGTCCAAATCTGTG GATTTGCTTTAAATGTCCTTCAGAATCAAACTATTGTTTCTTGTTATTTTCTATGTCAAGTTATTTGCTTTTATCAATTG AACTTCTTTAATAAAGTAAAATAAAAACAAGAGAAAAAAAAATCCTAGCTTAAATAAAGTTGAAGGATTCAATAAATGAT GTTTGTGATGAAATTTACGCTAAATAGCCCACTCTTGAGGACTAAATAGTCCTCAACTTGAAACCAACACTATTAAAAGA GCCAAACTTAGTAGGGCATCATGCAAGACTCTTAGGCTTGTGATGGTTGCTTCATGCATTTTATGATTTCATTCCTTTTC AATCTTAGGTTTTCCAAAGAATTCTTAAAGCATATGCTACAAAACTCTTTGCAAGACTCCCAAAGGGGGGCACGGGAATT GTTGCTGCAGCCACAGGCATGGATGGACAGATAAAGGTATCTTGAAAGGAATTGAGTTTTCATTATATGTGAGAATATTC ATGTTATCAAAGAACTCTCTCTCTCTCTCTGTTTTTAATCTTTGGAAATGTTGAACAGACATCTGATAGGGATGAAAGAG TGATTTGCTATATTGTCAACTCAGCCGAATATTGCCACAAAACGGTTAGTTTCTTTATCATTTCTTCATGCAGTTAATAA TGAGTAAATACCGGTTTTGCAAAACTTTTGCTAACTAGCTTTGTACTTGTCAGGCTGGTGAACTAGCTGAAAGTGTTTCT AAAATTATTGATCCTCAATTTGCAGATGGGGTGGATATGTCAGAAGTACAGGTAATAATGTCTTTTGATAAATAATGTTC TTTTCAACAGCTCTCTTTCTTATGGAGCTATGCAATTATGCAGGATGAATTTTCAGCTGTTATAACTAGATCATTGGTAA CCTTAGTGCATGGCCTGGAAACCAAATTTGATATTGAAATGGCTGCGATGACACGCGTTCCATGGGGTACGCTTGAAAGT GTTGGCGATCAATCAGAGTAAGCTGAACTCCTTAATAAATCTTAACTATTATTCTTATTCTTATTCCTGACAAAGATCCA AAGTTTAATTGTACAATTTTTCTTGCAGATATGTTAATTCTATAAATTTGATTCTAACCACTAGCATTCCTACACTTGGA AGTCTTCTTTCACCTCTATACTTCCAGTTTTTTCTTGACAAGGTGATCGACTATAAAATTCATTAAATACATGAAACTGT GTTTTTTTAAATCAACCTTGGTGTTGAGGGTATTTTCTTTTCTAGCATTAGTTATAGTTCTATAATTAATGTAAGTATAC ATTGATTTTTTTGTTTTAAATAACTATTTCTGATGAAAATGCCATTGTATTAGTTCATATTCATCTTCAACAGTGTTTGT GGCATGACAATTTTTGCTTATTCTGGGAGCATTTGTGAATGTTTATCTATTGCATATTAATATTTTTCTAAGTTTCAGGC TTCTGACTCAAGTCCAGTCAATTTTCACCTATACTGCGTTTTTCTGTTATGAAAATTTACTAAATTTTAGTTTTGATAAC ATCTCCTATAGTTCATCAATTTAATCATCCGTAATTATTCATATGGTATTTAGTTGTCTGCTTTAAATCTGTTCTTACAT TTATTATCTGCAGCTTGCATCATCTCTCGGTCCACGCTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACTG GAGCTCAGCAGGTACTGACTGCTTTTTTGTTTATCCTTATAACATTAAGAGTAAAGTCACAGAACTTAACTTCAGTGGGA AAGAGGAAGGAGGGTTAAGTACTGTACGAGTGGAGGTTAAGATATGCTCCAAAAAACCCAAAATTCAAAATACAAAAGGA ACAAAAAGAAGGAAAACGAGTGAAGCAAGTCTTTTTTTTAATCAAAAGATGAATTTTCTATCATCAAATTGGGATAAATC TATCTCTGTCCAAAAAGCTAGCTCATAAGGTAAAGATTGCCCAAGCATTTTTATGAGCTCTACTTTGGTCATATCTCTCT AGTTGATGTGGGATCTCAAGTTCTCAACACACCGCTTTCACACTTAGAATTGGATATCTGGAGCATGGAGATTAAGACTG TTTTTTTTAGTATTTTTACTGCAATGGTTAAGTTAATTGTAGTGGGAAAGTCGGAGGGCCAGGTTGATTTTTGGACAGCT GTGGATGAACCAATATCAGATCTCGGGTGGGCTCCATATGAAGTTTGGGCGGTCTAACTTTACTTCAAAAACTAACTCGG GAAGTGAAGATTGCCCAAGCCTTTATAAACTCTACTTTGACACATCTCTAGTAGATGGAGGATCTAATCAGCCCACCATC TGATTTAGGGGAGAGTCCTGAATAAATAAAATTTTGGATAAATCCTAACTATGAAATATTTTTGACATTGTGACAAGTGT CCTTTGCTTCCTGTCGCAAGCAAACAGGTTATTGAGGATGTGTTGAAACTAATGCAATAATATTTAGCTTGTATTTACTA TTTTTGTTACTTTGAACCGCTTTCCGTACTTTGGGCTTCGAGACCAACTTGCTTTTTCATTGTTGATTTTTTTATTATAA TCTGTTTTCTGAGGAGCTCATTGGAACCTTATTAATGTAGTTGAGGAACTAATAAAGTGATTTCTGCAGATGCTTTTGGA TACACAAGCTGTTAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGGTGAACTAGCTCTTGCCTATATTAATTG ATGTCACTAATAGTACTGCTTAAAATACAATAAAAATTATCGCCATCACATAACTTGTGATGGTGTGGCCTCTCTTGCTC TCTCCCTGTTGTAGTTTGTACCTAGTGAATCTAACATCTCAATTTCACATTTTTAGGGGATTTTTGTTGGGTTGTGGTGC AAATTCTTTTTTTTACCAGAAGCATTTAAATATTTTCTTACTCTAATTCCGGGATGGACAGTATTTGTTGTTAGTAAAGC TTTAAAGGAAAAATAGACATACTTATCTGGATTATGATTTGATATTTTAGAAAATCAAGCTGAATCAGAAATTAAACAAG CTTTCAGCTTTTGCTGGTTACTGTTGAAAACTCTATTCTATGAATCTCATTCTCATTGATTTTCAAAGTTACTGAATACA AGAGTGAATACAGTTTATATAATGAACACTCTAGCTTGTCAATCAAGCTAACCAATCTTCACAAACTCTAACAAATGCAG TTATGACAACTCAGCATGACAGCTAAGCAAAACTAACTATGACAGCTAGCATAACTAACTCTAAGGCTGACTGTATACAC AGTCAGCAGCTACTTAATAGTAGCTTCTACTACACGGTATGAGATGTACTCTAATAGACCCCCTCAAACTCAAGGTGGGT GAGAAGGAACTTTCTCAATCACATTAAGTTTGGAACGAAGAAGCTCAAACCGGGTAGGAGAGAGGGCTTTAGTGAAGAGA TCTGCTAGCTGATCCTCGGAAGGAATGTGATGAACAAAGAGTGACTTGGCAAGAACTTTCTCCCGCACAAAGAAGATATC AAGATCCATATGCTTAGTTCTGGTGTGAAGAACCGGACTATGAGTAAGAGCAACAGCCCCCATATTATCACAGAACACTC TTGGAGGAGTAAAGGGAACTTGAAGTTCCTGTAACAAGGATTGAACCCAAAGTAACTCTGCTGAGGTATTGGCCAAGCTG CGGTATTCAGCCTCTGTGCTAGACCTAGCCACCAAGGTCTGCTTCTTGGAGCTCCAAGAGACTAGATTGGGACCAAAAAA GACACAAGTCCCTGAGGTTGATCGTCTGTCATCAGGATCTGATCCCCAGTCAGCATCACAAAAGGCAACAAGGGGAACAG AAGTATGCAAGGAACAAGGTCTAAGATGAAGACCATGATGTAAAGTGCCTTTGAGATACCTAAGTATGCGGTTCACTGCC TTCCAATGATCTTCCAAGGGCTGACTGAGAAACTGACACACTTTATTTACAGCAAAACTAATTTCTGGTCTTGTCAAAGT AGCATACTGCAGTGCACCAACAATTGATCTGTATAGAGTAGGATCTGCAAAATAGTCTGAGCCATATTTGCTTAGCTTGG CACCTCCAATCATGGGAGTAGAAATGCCTCTAGCATCCCCCATTTCTGCTCTCTCAAGTAAATCAGTAATGTACTTTGTT TGAGTTAAAAGTAAAGACTGATCCTTCAAGTGATGAACCTGTACTCCCAAGAAATAATCAAGCTGCCCCAATTGCTTCAA AGAGAACTCTGAATCAAGGTTCTGAACCACTTGCTGAACCTGAGGCAGTGAATTGCCAGTGATGATAATGTCATAAACAA GAATGTAGATGCAGCACCCTTTAGTGTAAAATGTGAACAAAGAAGGATCACATTTGCTAGGAGCAAAACCATACTTTACT AGGGCTGCTCGCAGCCTCTCAAACCAAGCTCTTGGAGCTTGTTTGAGGCCATAGAGAGCTTTGTGCAGCTTGCACACAAG AGACCTATCTGCACATTGAAAACCAGAGGGTTGAGTCATATAGACTTCCTCTTGAAGTGCCCCATTGAGAAAGGCATTAT TCACATCAAGCTGATGAATGTGCCACTTCTTAGTGATGGCCAATGTGAGGATAATGCGAATAGTTATAGGCTTCACCACT GGAGAAAAAGTTTCAGAATAGTCAAAACCTTTCACTTGATGATAACCCTTGGCTACCAACCTTGCCTTGTATCTATTGAT GGTCCCATCTGGATTCTCTTTAATCCTGAATACCCATTTACAGCCAATAGGCTTCCTATCCTTAGGAAGAGGGACCAAAG TCCAGGTATCATTAGCCATTAAAGCATCATATTCTGCCTGCATAGCAGCTTTCCACTTAGGATCCTTAAGAGCTTGAGTA GAGGTTGTAGGTTCTGCCTGTGTGAGAAGTAAAGTAGGAAACAACCTTTGCATAACAATGCCAGACTTTGCCCTTGTTTG CATGGGATGAACATTCCCAATAGGCTGAGGAATAGCTCCAGTAGAAGACTCTGAGTGATTGTCCACTTGGTTGGCTGAAC CAAAAGATGAGGCAGGCATAGAGGAGGGACTAAGCTGCTGTTGTACTGAAAAGTCACTATGATGACTAGCCTCTGAAGGT GAGGCAGAAGCTGCAGGAGGGTGTGAAACAGTAGCAGCAGGTTGCTCAGCAGTCACAATAGTAGGAACAATAGAAATAAC TGAAGAAACACATTGGTCAGAACCAACAGCCTCAGAAGAGGGAAACAGAAGAGGGAAACATATGAGAGTATGGGAAGTTG AACTCATCAAAGACCACATCTTTTGAGACATAGATCTTACCCTCATTGTCCATACACTTGTAACCTTGATGTTGTGAAGA ATATCCCAAGAACACACATAGCTTAGATCTGAGAGACAGCTTAGAGTGTGTATAAGGCCTTAAATGTGGATAACAAGCAC AACCAAAAACCTTAAGCAGGTTGTAGTCAGGTTGTGTGTTAAAAAGCTTGAAATGTGGACTCATGTTGCCTAAAACTGAG GTAGGTAATCTGTTAATAAGAAAAACAGCTGCTAGAAAGGCATGATCCCAAAACTGATATGGCAAATGAGCATGTGCTAG CAAGGAAAGACCAGTCTCAATAATATGGCGATGCTTTCGTTCTACACTACCATTTTGATGATGTGTATAGGGACAAGTTA GTCTATGAACAATCCCTAATTTTGAAAAATAGGGTGTGAGTGGTTTGAACTCTGTACCATTATCAGTTTGTACAGACTTA AGTTTCATGTTAAATTTCAACTCAACCATAGCTTGAAACTGGAGAAAAACAGAACATGTATCAGACTTCTTTCTCATTGG AAAAATCCAAGTGAAACGAGAGAAGGCATCCACACAAGTGAGAAAGTAAGAGAAACCACAAGAAGATTCAATAGAAGCAG GCCCCCATAGGTCAGCAAAAACTAGTTCCAAAGGTAAAGTATAGACAGTATTAGAAGAATGAGAAGGCAATCTATGTGAT TTGGAAAGACAACATGCTGAACAAACAGTGAACTTTGTTTTATTAGGTACTAGAATATTACAAGAAATTAAAGCTGAATG TAAAGCCTCATGATGAGGATGACCTAGTCTAGAGTGCCATAAACCATAAGAGGTTGGGCTTACAATAGTAGATGACTTGT TACTAGAACTAGGAACAGTAGAACTAGGTAAAACAGCTGACAAGGCAGAAACTGAGTCTGAAACAGCAACTGGAGGCAAG GAATTTGGAACGTGAACAGAAGATCTCTTGGAAAGAGAAGGAGTGTGCATGCCTTCAAAGACATACAAGCCATCTGGACC AACATGACCTTTAAGAAGAACCCTAGAGGTGACCTGACATTTCACAACACAAAAAGAGGAGTGAAACTCAAAGTAAACAT TATTATCTCTTGCAAATTTACTCACACTAACCAGATTTTTGGTTATATCAGGAACTAAAAGCAGATTTTTGAGAGTGAGT GTGGTGTTAGTATGATAGGGAGAGGGAAAGGAAGCAGATCCTATACAGAGGATTGGCAAACCTTGTCCATTCCCCATGAA GATGTGATCATTACCAGCAAGAGAAACACTATCTGAGACAACTGATGCATCATTAGTCACATGGTGAGTTGCACCAGAAT CAGGGAACCAAGTGCTCAGATTTGCTGAAGCAGAAGAGCCTCCTGCTTGTGATGGACCTGTGATCATAGCTTGAGGTGGT CTTGCATTGTAATTCCCAGGTCTGTGCCCTCCACTTGTGAACTGAGAAGAGGATGAATTATTCCAAGGTGTACCAGCAAA AGGATGAAAACCAAACTGCGGAGGACCAAAAGGAAATCCTGGAAAAGAAGAACCAGGTCCAGAGTATTGCTGTTGTCCAA ACTGAGTTGGATTTCCAAACTGAGGAGAACCACAGTAAGGAGAGAAACCAAACTGAGGCATAGGAACCATAGGGAAATTA GGAAATTGCACTCCATAACCTGAGTTCATGCCAAACATGCCAGTAGAAGGAGTGGAAGATGCACGATGATAGCAGATACT GGCATCATGACCATACTTCTTGCAGATCTGACATTGCACACTGCGATTGTTGCCTCTGCCTCCGCCACGTCCATTGTAGC CACCGCGAGAGTTGTTGCCTCCACCACGTCCATTGTAACCACCACGACCACGCGAATAAGAGAAACCACTGCGCTCATCA CCGCGCTCATCAAAGGAGCGCTCCTCATAGGAAGAATCGACGGAGCTGGAAGCATAATTTGCCTCAGAAGGCACCGGCGA AGGCGCCGACGGTGGAGGTTGCGTCGCTGGCGGCGGCGAAGCCTGCGTCAGTAGCGCCAATGGAGGATTCGCAGTAATCT GACGAGATCGAGCTCGATCTAGCCGCGCTTCATGAGCGATAATCATCGCTTCGATCTGCGAGATTGAACTCGGTGTTTCA CGATTATAGACAATCGTTTGGAGATGACTGTAATCCTCTGGCAAACCATCAAAAATTGCTTCCAATTGTTCACGATAGGA GATTGGATCTCCAATAGTGATCAACGCATTAACAATCGACTTGATACGTTTGAGATACTCGGAACACGACTTCGATCCCT TGGAGATGGATCGAATTTCAGATCGCAATTGCGTTGACTGTGCGAGAGAGTGTGCTTGGAAGAAATCGAGCACTGCCTCC CACACTTGCCACGACTGAGAACAGTTCACCACCGTAGGAAGCACCGATGGCGAAAGAGACGAGAGTAACCACGTGAACAG AGCAGAGTCTTGCTGCTCCCAGATTTGATATGCAGGATTCTCCACTGCATTCACACGATCTTCTTCACTGAGAAATCGTG GTGGAATCTCAGGACAAGCAAGATAACTCTGCAATCGATGCGTACGAACGATCCCTTCCACATGCTGCTTCCATGAAAGG AAATTCGTATCATCAAGCTTCAGTGAAAGCTTGTGAACAAGAGTTGAGGAACTCAACTGTGGTTGAGCCACTGCAACTGG AACCGGAATCGGAATCTCAGGAACTTCTTCAGCCATGGTGAAGAAGATGAAGAAGAAAAATTTGAGAAGAGAGACCTCAA GGATCGTACCCTGCTCTTGATACCATGTTGAAAACTCTATTCTATGAATCTCATTCTCATTGATTTTCAAAGTTACTGAA TACAAGAGTGAATACAGTTTATATAATGAACACTCTAGCTTGTCAATCAAGCTAACCAATCTTAACAAACTCTAACAAAT GCAGTTATGACAACTCAGCATGACAGCTAAGCAAAACTAACTTTGACAGCTAGCATAACTAACTCTAAGGCTGACTGTAT ACACAGTCAGCAGCTACTTAATAGTAGCTTCTACTACACGGTATGAGATGTACTCTAATAGTTACCCTTTCCCACTTGTA TTATATTTTATCGCACTGAAAGAATCTACTTTACAAGCGGTACTGATGCACAATATCTATCAGTATAAACTATTTCTACT TTATTGCTGAAATCTTGAGCTAGAATGGTGAGAAAATAACTGGTTGCTTGATATTCTAAATTACTTGTACACTAACAAGG AAACAATAATGGACTGACTATCTGGACCAAACAGCTATGTTGTCTCACGTAAAGTTATAAACTATATTCCACCGCCTAGA CTAAAGATCTCCTTCCAGGAATCTAAAATCTTTACAACTCACCTTTGTCAATTAAATACTGAAAACAATATAATTCTGTT TCCATTTCTAATTGTTGTTGTGTTCTTTTCACCGGTTTATTTCATTACACTAACTGATTGCTTATTTTTGCGACAGACAT CAGGTGCTGCTAGTTATTCCAAGTTCGTAAGCCGTGAGATGAGCAAAGCTGAGGCTCTTTTGAAGGTTTGTTGTCTATTT ATTACCAAAAAATTTGTGTAATAATAATTTAGTTTGTTTTGATTAGGTTATTTTGTTTTCAAAACATTTTAGAATCAAAA TCTGATAGAAGGAATTTTGAAAAAAAAAGATTATTCCCTAAGGCTGCATTTGATGCATGCTGAGAGACAGGATAAGTAGA AGAACACATTACAAATAGTTTAATTACATCATCACAATTTTTTTTTCTGTTTGGTCTTTGATGATTGAAGCACAGCACAA GTAATTTTAAGGGAGATAAGGAGAAAAACCGAAAAAATAATGGAGGAGAGTTGAAGGAGAGAAGGGTTATTGAGAATAGG AAAACAAGTTGGGTATTTTTCACTTTTAGATGTTCAAAAAGTTGTCTCGGTTCATTAACGAGTTTTTGAAACTTTTGGCT TATGCTTCATCTTTTGTTTTATTCTGTCTCCTACTGTTTAAAAATCAAATATAGAACAGGTAATTTTTGTAGCAAATAAC CAAACATGCACTTGGTTCCTTCTGATTCAAGTTTGTGCGGTTATCTCTATGTATTAGGTTATACTTTCTCCAGTTGATTC TGTAGCAGATACCTACCGTGCATTGCTACCTGAGGGTACACCCATGGAATTTCAGCGAATATTGGAGCTTAAGGTTATAA TTAATATTTCTTGCTAGTTCTTCTATCAATTTCTCTAGTTGGTTGATTAATTGTTCATGCATTATTTCTTTGTTCTGGAC CTCTGATCATTGAGATAAAGTACACTGGGCTATATAATGTTCTCTATTGCTGATGTTACAAACCTTGCCGTAATTCTCAT TGCTAAAGTATTGGATTATAAGAAGATACAGATTTGATTGCTGAAGAGATGAGATTGATGAGCACCATCTAATGTCTAAA TCAGACAGATGATGTAAAACAAAAAAAAAAATTATGATCCATTTCTTAATAAGCAATTGATATTCATTTAAGTTAAAATT TATGGTCATGATTTGTAAGTTATGCTTCCTATTGGAATGACTTATGCCTTGTGTTTTCAGGGTCTCAAAAAAGCTGATCA ACAAAGCATACTAGATGACTTCAACAAACATGGACCTGGCATTAAGCAAACTCAGGTTTCGCCTGCAATTGTACCTGCTC CACCTGTAGCTCCTGTGGTACCTAGCCCCGCAGCTGTCGGACTCGTCGCTTCCCGGGAAGATGTTCTAACTAGGGCGGCT GCTCTTGGACGTGGAGCTGCCACCACAGGGTTCAAGCGGTTCCTAGCTCTAACCGAAGCTGCCAAAGACAGGAAGGATGG GCCTTTCCGAAAGCTTTTTAATCCGTAA
CDS sequence (LotjaGi6g1v0278000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATCAAATGAAGAAATTTGGAAAATCTTTCCATCTTCATGGCATGTTTCTTATAGGCTCTGTATACTATTTTGCAA AAAGACGAGGAAACAACTTGAAGACATTCTTGCTAATCTAAAGGAAAAGCCAGATGTTGGGACCTTGTTGCTGGCTTTGC AGCGAACTTTAGAGTTTGAGGATGAATTGGCTGAGAAATTTGGGGGAGGAACTCAAAACAGAGAAGTTGCGAATGCAATT GAAGAAATAGGTCGAAGTGCTAATTCTAGCAGTAGTGCTTCTGATATCAGGAAGAAATATGAAAAAAAGCTTGCTGCGCA ACAAGGAAGTGAGAGTGAAGAGAAAGATGGAAGTAAGGATCTGGCTGTGCCTGGAGCTGGGTTCAACTTCCGTGGAATTA TTTCATCTTGCTTTGAACCTCACTTACAAGTATACATAGAATTGGAAGAGAAGACGCTAATGGAAAGTCTGGAGAAACTT GTTCAGGAGGAGACATGGGATATTGAGGAGGGAGGTCAGAGTAGTGTTTTGTCCAGTAGCATGCAGTTATTTCTTATAAT TAAGAGAAGCCTGAAGAGATGCAGTGCTTTGACAAAGAACCAGACACTATATAATTTGTTGAAGGTTTTCCAAAGAATTC TTAAAGCATATGCTACAAAACTCTTTGCAAGACTCCCAAAGGGGGGCACGGGAATTGTTGCTGCAGCCACAGGCATGGAT GGACAGATAAAGACATCTGATAGGGATGAAAGAGTGATTTGCTATATTGTCAACTCAGCCGAATATTGCCACAAAACGGC TGGTGAACTAGCTGAAAGTGTTTCTAAAATTATTGATCCTCAATTTGCAGATGGGGTGGATATGTCAGAAGTACAGGATG AATTTTCAGCTGTTATAACTAGATCATTGGTAACCTTAGTGCATGGCCTGGAAACCAAATTTGATATTGAAATGGCTGCG ATGACACGCGTTCCATGGGGTACGCTTGAAAGTGTTGGCGATCAATCAGAATATGTTAATTCTATAAATTTGATTCTAAC CACTAGCATTCCTACACTTGGAAGTCTTCTTTCACCTCTATACTTCCAGTTTTTTCTTGACAAGCTTGCATCATCTCTCG GTCCACGCTTTTATTCTAACATTTTCAAATGCAAGCAAATATCAGAAACTGGAGCTCAGCAGATGCTTTTGGATACACAA GCTGTTAAGACAATCCTTCTTGAAATTCCTTCCCTTGGTAGACAGACATCAGGTGCTGCTAGTTATTCCAAGTTCGTAAG CCGTGAGATGAGCAAAGCTGAGGCTCTTTTGAAGGTTATACTTTCTCCAGTTGATTCTGTAGCAGATACCTACCGTGCAT TGCTACCTGAGGGTACACCCATGGAATTTCAGCGAATATTGGAGCTTAAGGGTCTCAAAAAAGCTGATCAACAAAGCATA CTAGATGACTTCAACAAACATGGACCTGGCATTAAGCAAACTCAGGTTTCGCCTGCAATTGTACCTGCTCCACCTGTAGC TCCTGTGGTACCTAGCCCCGCAGCTGTCGGACTCGTCGCTTCCCGGGAAGATGTTCTAACTAGGGCGGCTGCTCTTGGAC GTGGAGCTGCCACCACAGGGTTCAAGCGGTTCCTAGCTCTAACCGAAGCTGCCAAAGACAGGAAGGATGGGCCTTTCCGA AAGCTTTTTAATCCGTAA
Protein sequence (LotjaGi6g1v0278000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSNEEIWKIFPSSWHVSYRLCILFCKKTRKQLEDILANLKEKPDVGTLLLALQRTLEFEDELAEKFGGGTQNREVANAI EEIGRSANSSSSASDIRKKYEKKLAAQQGSESEEKDGSKDLAVPGAGFNFRGIISSCFEPHLQVYIELEEKTLMESLEKL VQEETWDIEEGGQSSVLSSSMQLFLIIKRSLKRCSALTKNQTLYNLLKVFQRILKAYATKLFARLPKGGTGIVAAATGMD GQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQFADGVDMSEVQDEFSAVITRSLVTLVHGLETKFDIEMAA MTRVPWGTLESVGDQSEYVNSINLILTTSIPTLGSLLSPLYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQ AVKTILLEIPSLGRQTSGAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRILELKGLKKADQQSI LDDFNKHGPGIKQTQVSPAIVPAPPVAPVVPSPAAVGLVASREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFR KLFNP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 3 | 165 | 163 | 1.6E-37 | ||
| PANTHER | 4 | 549 | 546 | 3.7E-193 | ||
| Coils | 23 | 43 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | GARP complex | A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles. | ||
| Biological process | Retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
Expression pattern of LotjaGi6g1v0278000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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