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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0285500 |
| Transcript ID | LotjaGi6g1v0285500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter; TAIR: AT4G16480.1 inositol transporter 4; Swiss-Prot: sp|O23492|INT4_ARATH Inositol transporter 4; TrEMBL-Plants: tr|K7LB72|K7LB72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0285500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60257737..60262930) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTGACTTATTTATAATACAGAACTTTGGCTCCATCCCATGAATTTTCCTCTGCATGCAAAAATACCATTTGGATTTG ACTTAACACAAGGTTTGATCTTTCATATATACATTTTAGGTGCTTGAAAATCATCTTCTTATAGGAGTTATCCTTATCCA CTAATGCTAAAATCACACCACAATTATATTTTCATCTTATATAACAGACATGATCTCCATATAATTGTTAGAGTTTTGTG TTTCTGACTTACACTAATTCTCATGCATTTGGAGCCTGTGTTTATTTTCAAGCTAGGTCCAAGATGGAAGAAGTGGTAGC AGCAGACAAGGCCGAGTTCACAGAATGCTGGCGCAGAACAACTGAATCACCTTATATCATGCGCCTTGCTCTTTCTGCTG GCATTGGAGGTCTCCTCTTTGGTTATGACACAGGTAATAGAACCCTTCTTCAATTTTCTCAGAAGAAGCCATAATCAATT TTAGAGAGATCGCTTCTGGTTTCAGAATTGATTCTAAGGAAAAAGAAATCGATCTAAACATGCCTACTATAGTACTATTT TGACCGTATTCCTTGCATGCAGGTGTGATTTCTGGAGCCTTGTTATACATTCGTGATGAATTTGACCAAGTTGACAAAAG AACATGGCTCCAAGTGAGTTTAAGTATACTCATTCCTACCATCTTTATATCAGCCTCTCTTCCATCATAATCAATTTTAA AATTCAGAATGTGTCACAACATTTTCTCGCCAGAATTGACTGTGGCTTGAGAACCAATTGTAGAAGAGTTTCTAAAGATG CAAAGTTATCTTCATATTGGAGCTAGTTGACATGGTTATTTTATGATCTATTGTTGTGCAGGAAACCATTGTTAGCATGG CTGTTGCTGGAGCTATAATTGGTGCTGCATTAGGAGGGTGGATAAATGACAAGCTAGGGAGAAAGAAATCTATTTTGTCT GCTGATGTTGTGTTCATTCTAGGTGCATTAGTTATGGCTATTGCTCCTGCTCCATGGGTTATCATTGTTGGAAGGGTTTT GGTTGGTTTGGGAGTTGGTGCAGCTTCCATGACTGCGCCTCTATACATCTCTGAAGCTTCCCCTGCTAAGATCAGAGGAG CTTTAGTCAGTATAAATGGACTTCTTATCACCGGCGGTCAATTTCTGTCTTACCTCATCAATTTGGCATTTACCAAGGTT TGCAAGATTGGAACATTTGTAGCTATTCAAGTTCATTAAACTTGAATGACATAACTGAAATTGATTTGTCTCAGGTGCCT GGAACCTGGCGTTGGATGCTTGGGGTGGCAGGAATTCCCGCCTTGATACAGTTAATATTGATGTTGTCCCTTCCTGAGTC ACCTAGATGGCTCTACAGACAGGTTTGTCAAATATAAATTTTGAATTTGTGTACATTCTTCTTGAGAGTTTCTTAATCTA CAGAAGAGTTTATTTTCTTAATGTTACAAGATAATTTCTTAAATATTTTTGTTGTTAAATGAACTGAGCTATGAATTGAT GTCAGTCTTATGCTTGTTCACAGTTAAAAAGTTTTAACTTTTCTTATATCTCTCCTGTTTAATGGATAATGTCCTGGTTA TTTCTGAGATGCCTCAAGATGCTGTGTGTTTAGTTGCAATGTGTATAAATTGCAACGAAATTGTCAGCTATTTCCAGGAG TCTTCACTTTACATTAAGCTTTACTTCATGTCTTAACTATGATAGCATGTTTGTATCAGTTTCTCTTTCCTTATAATCCT CTCTGGCACCCAGAACCTACTCACATAAGCTTCTCTCTGAATTGATTTTGGAGTTAATTGTAGAAGGTTTTCTAAACATA TTCTGAATGATGAATGTAAAACACAAACAAGTCCTTAGTTTTCTTTTTCATGAGACTTGACTCCTCAGATAGCAATTTCT TATATTTCATGTCTGCAATTTATGAATGATCAAGAGTAACTTCTCAACTTCAGTCCTTTAATTATCTTTTTGGTTATTTG ACTCATCAATCATTCTTTGGAGCCAATTTCATCTATACTGCTGAGTTTCTATTAACCAGAACAATGTCGAGGAGGCAAGG CGCATTCTGTCAAAAATCTACCGTCCTGATGAAGTTGAAGAGGAGCTGAAAGCCATGCAAGAATCCATTGAATTAGAGAA AGCAGAGGAAGGCTTAACCGGGCATAGTCTTGCACAGAAACTAAAGGGTGCCTTGTCTAACAAAGTAGTTCGAAGAGCGC TTTACGCAGGTATCACAGTCCAAGTTGCTCAGCAGATTGTTGGTATTAACACAGTCATGTATTACAGTCCAACAATCGTT CAGTTCGCCGGAATTGCCTCCAACTCCACAGCACTTGCACTTTCCCTGGTTACTTCTGGTCTGAATGCTGTTGGCACTAT CTTGAGCATGGTTTGCATTGATAGATTTGGAAGGAGAAAGTTGATGCTCATCTCCATGATAGGCATCATTGTGTGCCTTG TGACTTTAAGTGTTACATTCTACCAAGCAGCTCACCATTCTCCTGCCATTAGTAACAAGGATAGCCTTAGCTTTGGGGCA AACTCTACATGCCATGATTACACAAAGGCCCCAGATTTCTCCTCATGGAACTGTATGCATTGTTTGCAAGTAGATTGTGC CTTTTGTGCCAGAAGCGAGAGTGAAGTAAGTTCTACTAAATTCTGTGCATGCCTCTTTTATAGCATGTTTGGATCAACTT CTTTTTCCTTAGAATGAATTATGAAGCCTAAAACAATAAGCTTCTCATACTACAGATATCATATATCACAGCTATTACTT AATTCTATTCTCTTCTTTTCTTTCACTTTCTATTTGAGTGTCCACACACTCATGCATGACCACCATCCTTCCTTTTCAAG AATTTAGGTACTCATATTGTCATGTTTTGCTCAACCTTTTCAAAGAACATGTAAAAACCTGAATTTTGTCCAAATTAGAG ACAGTTTTGATTAAACTATAGAGTTAATTCTGTCTCTTTCTATCTGTTATCCAGTTTCTTCCAGGAGCATGCTTGGCAGC AGAAAAGGGTATCAGAGGCGCATGTCGAGCACAAAATCGTGTATGGTTTTCAAAGGGTTGTCCAAGCAAAATTGGGGTCC TTGCAGTTGTGATCCTTGGATTGTATATCCTAGCATATGCTCCTGGAATGGGAACAGTGCCTTGGGTTCTGAATTCTGAG ATTTATCCATTGAGGTTCAGAGGTCTAGGTGGAGGTATAGCAGCAGTTTTCAATTGGTGTGCTAATCTACTTCTCAGTGA ATCATTCTTGAGCATGGTAAAAGCTCTAGGCACTTCTGGCACATTCCTCGTCTTTGCCGGCTTCTCCTTGATTGGCCTTG TATTCATCTATGCATTGGTGCCTGAAACCAAAGGCCTTCAGTTTGAGGAGGTCGAGAAATTGCTTCAGAAAGGCTTCAAA CCTTTCCCCTTTGACAGGAAAAAGGAGGAAGATAACAAAGCGAAAAAACAAGACTTGGCTTAATGCACCTACCAATATTA AAAGTGTGTCTTGATTAACTTTAGAAAAATATTATAATAAATAAGATTTTGGTAATCAGTATAGGTAGAGATTCCTGTTA ATGGTTCCTAATGTCAACTCTAAATAGTAAATACTGATAGTCTGATTGGCTTCTAAGTTTTAACTACTAATGTTTCAACT TTTTCCCCCTGCTTTCTCCTTGTGATGACTATAGGTAGAAGTTAAAATGACTCTAGAAAGCAATTTTGAATAGAAGTTCA CCACAGTACTTGAGAGGCAGAAGCATAGTGAAGAAGACGTGGGAATTCAACATCCTTTTTCAGCTATTGAATGTCCCAAG AAGCTTCACACTTTAGATTAAAGAGAACCCCACTGCTATCTCACCAAACAGATTCGCCTTTTTATGATGCAAGCAATGAA CCTAATCCTAATCCACACATAAAAAAACCATGCTTTTGAATTAGTGAAAGGCAAGACCACCGACACCAGGTAATTCAAAA CTTAGGATTTGAAGGTGCAACCATCCAAACAAACGGCAGGACAAAACATACCTGCCCCTGCCAGCTAATTGGTGATGATT ATTATAAGCGACAAAAAGATTTGAAAGGGGGAGGAAAATAATGATCAAGATTTAAGATACTCGATGAGGAAATTTTGTAC TGCAAATGCAACCTGTGGTGGAATGAAGCTGCAAGGGGTGGTGGGGCTTTGATTTGCCATACAAATGTAACTTGGAACCT CATTTAGTAGCATGTAGCGGGTGAACCGCTTCAAAACAAGGACAAGCAGCCCAAGGGACCTACAATACCATCATCATCAC ATTTATTCATATAAACACCCTCCTAAATATGTCCCAATCTCACCCCTATAACAATTTTACATCAACCAATTAAGATCTTC CAGCACAACCAGTCCTTCATCAGCTGGAGAAAGATAATGATGAACACTAATCATACATGGCCCATCTGAACTGAATTTAC AGACTCGTTCTTTACTCTTTCCAGAACATTGATATTAAAAGACCTTTTCAAGATTTCTTTTTTGGAATTCTAATCTCAAG TTGTGTGCTGGAAAATTGTTTGAACATCACAATCAATAAATTTGGTCCTTACAGAGAATTCTCGACCTCATACAATACAT GACTACAAGTTGCTTGGTTTAGCCACAAATGTCAACATTAGCAAGCACGTATTCAATATCTTCTCTTAACTTTCCACCTA TTCAATATTCCAAAATTTCGTCTCAAAGAATCATAAGAGTTGAGTCGACGACAACAACATCACACTTCAGCTCAGTTTTA CATTCCAAGCGGTAATTAAGACAAAGTGGAACTCAATGGGAAGTAGAAACAGATGGAGTTGATAACTAGCCTATGCAATA CATTCAGCATAATAATATACACGAACTCAAGTTCCGTTTTAATCAAAGGAAATTATGGATACAAATTCCAAGTATCCAAG TAGTAGTGCAGTACAAGCTCTGTACTTTCACTACCAGCAGGAAAATTAACATACATTATACAATCAGAAACCCTTTTCAC AAAACTAGGGTCATCTACTAAACCAAAGAAATTTAAAAAACCTAATCAACCAAAGACTCAAAACGCAACCATGGAACTCC AGGACACAGAACAAATTGAAACAAGGGAAACCAAAATGCCAAACCTAGCTATATTCATACACCTAAGGGTCAGT
CDS sequence (LotjaGi6g1v0285500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGTGGTAGCAGCAGACAAGGCCGAGTTCACAGAATGCTGGCGCAGAACAACTGAATCACCTTATATCATGCG CCTTGCTCTTTCTGCTGGCATTGGAGGTCTCCTCTTTGGTTATGACACAGGTGTGATTTCTGGAGCCTTGTTATACATTC GTGATGAATTTGACCAAGTTGACAAAAGAACATGGCTCCAAGAAACCATTGTTAGCATGGCTGTTGCTGGAGCTATAATT GGTGCTGCATTAGGAGGGTGGATAAATGACAAGCTAGGGAGAAAGAAATCTATTTTGTCTGCTGATGTTGTGTTCATTCT AGGTGCATTAGTTATGGCTATTGCTCCTGCTCCATGGGTTATCATTGTTGGAAGGGTTTTGGTTGGTTTGGGAGTTGGTG CAGCTTCCATGACTGCGCCTCTATACATCTCTGAAGCTTCCCCTGCTAAGATCAGAGGAGCTTTAGTCAGTATAAATGGA CTTCTTATCACCGGCGGTCAATTTCTGTCTTACCTCATCAATTTGGCATTTACCAAGGTGCCTGGAACCTGGCGTTGGAT GCTTGGGGTGGCAGGAATTCCCGCCTTGATACAGTTAATATTGATGTTGTCCCTTCCTGAGTCACCTAGATGGCTCTACA GACAGAACAATGTCGAGGAGGCAAGGCGCATTCTGTCAAAAATCTACCGTCCTGATGAAGTTGAAGAGGAGCTGAAAGCC ATGCAAGAATCCATTGAATTAGAGAAAGCAGAGGAAGGCTTAACCGGGCATAGTCTTGCACAGAAACTAAAGGGTGCCTT GTCTAACAAAGTAGTTCGAAGAGCGCTTTACGCAGGTATCACAGTCCAAGTTGCTCAGCAGATTGTTGGTATTAACACAG TCATGTATTACAGTCCAACAATCGTTCAGTTCGCCGGAATTGCCTCCAACTCCACAGCACTTGCACTTTCCCTGGTTACT TCTGGTCTGAATGCTGTTGGCACTATCTTGAGCATGGTTTGCATTGATAGATTTGGAAGGAGAAAGTTGATGCTCATCTC CATGATAGGCATCATTGTGTGCCTTGTGACTTTAAGTGTTACATTCTACCAAGCAGCTCACCATTCTCCTGCCATTAGTA ACAAGGATAGCCTTAGCTTTGGGGCAAACTCTACATGCCATGATTACACAAAGGCCCCAGATTTCTCCTCATGGAACTGT ATGCATTGTTTGCAAGTAGATTGTGCCTTTTGTGCCAGAAGCGAGAGTGAATTTCTTCCAGGAGCATGCTTGGCAGCAGA AAAGGGTATCAGAGGCGCATGTCGAGCACAAAATCGTGTATGGTTTTCAAAGGGTTGTCCAAGCAAAATTGGGGTCCTTG CAGTTGTGATCCTTGGATTGTATATCCTAGCATATGCTCCTGGAATGGGAACAGTGCCTTGGGTTCTGAATTCTGAGATT TATCCATTGAGGTTCAGAGGTCTAGGTGGAGGTATAGCAGCAGTTTTCAATTGGTGTGCTAATCTACTTCTCAGTGAATC ATTCTTGAGCATGGTAAAAGCTCTAGGCACTTCTGGCACATTCCTCGTCTTTGCCGGCTTCTCCTTGATTGGCCTTGTAT TCATCTATGCATTGGTGCCTGAAACCAAAGGCCTTCAGTTTGAGGAGGTCGAGAAATTGCTTCAGAAAGGCTTCAAACCT TTCCCCTTTGACAGGAAAAAGGAGGAAGATAACAAAGCGAAAAAACAAGACTTGGCTTAA
Protein sequence (LotjaGi6g1v0285500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEVVAADKAEFTECWRRTTESPYIMRLALSAGIGGLLFGYDTGVISGALLYIRDEFDQVDKRTWLQETIVSMAVAGAII GAALGGWINDKLGRKKSILSADVVFILGALVMAIAPAPWVIIVGRVLVGLGVGAASMTAPLYISEASPAKIRGALVSING LLITGGQFLSYLINLAFTKVPGTWRWMLGVAGIPALIQLILMLSLPESPRWLYRQNNVEEARRILSKIYRPDEVEEELKA MQESIELEKAEEGLTGHSLAQKLKGALSNKVVRRALYAGITVQVAQQIVGINTVMYYSPTIVQFAGIASNSTALALSLVT SGLNAVGTILSMVCIDRFGRRKLMLISMIGIIVCLVTLSVTFYQAAHHSPAISNKDSLSFGANSTCHDYTKAPDFSSWNC MHCLQVDCAFCARSESEFLPGACLAAEKGIRGACRAQNRVWFSKGCPSKIGVLAVVILGLYILAYAPGMGTVPWVLNSEI YPLRFRGLGGGIAAVFNWCANLLLSESFLSMVKALGTSGTFLVFAGFSLIGLVFIYALVPETKGLQFEEVEKLLQKGFKP FPFDRKKEEDNKAKKQDLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 5 | 562 | 558 | 1.2E-262 | – | |
| PANTHER | 5 | 562 | 558 | 1.2E-262 | – | |
| SUPERFAMILY | 17 | 552 | 536 | 1.44E-68 | ||
| TIGRFAM | 21 | 373 | 353 | 3.6E-97 | ||
| ProSiteProfiles | 28 | 543 | 516 | 56.934 | ||
| TMHMM | 28 | 50 | 23 | - | – | |
| Phobius | 28 | 53 | 26 | - | – | |
| Pfam | 29 | 366 | 338 | 2.1E-94 | ||
| CDD | 31 | 541 | 511 | 1.48592E-171 | – | |
| PRINTS | 36 | 46 | 11 | 1.5E-27 | ||
| Phobius | 54 | 64 | 11 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 65 | 85 | 21 | - | – | |
| Phobius | 86 | 96 | 11 | - | – | |
| Phobius | 97 | 115 | 19 | - | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 116 | 120 | 5 | - | – | |
| Phobius | 121 | 143 | 23 | - | – | |
| PRINTS | 122 | 141 | 20 | 1.5E-27 | ||
| TMHMM | 126 | 144 | 19 | - | – | |
| ProSitePatterns | 127 | 152 | 26 | - | ||
| Phobius | 144 | 154 | 11 | - | – | |
| TMHMM | 151 | 173 | 23 | - | – | |
| Phobius | 155 | 177 | 23 | - | – | |
| Phobius | 178 | 182 | 5 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 183 | 205 | 23 | - | – | |
| Phobius | 206 | 274 | 69 | - | – | |
| Phobius | 275 | 298 | 24 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| PRINTS | 286 | 296 | 11 | 1.5E-27 | ||
| Phobius | 299 | 312 | 14 | - | – | |
| TMHMM | 312 | 334 | 23 | - | – | |
| Phobius | 313 | 333 | 21 | - | – | |
| ProSitePatterns | 331 | 347 | 17 | - | ||
| Phobius | 334 | 344 | 11 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 345 | 366 | 22 | - | – | |
| Phobius | 367 | 449 | 83 | - | – | |
| Pfam | 448 | 553 | 106 | 6.3E-26 | ||
| TMHMM | 450 | 472 | 23 | - | – | |
| Phobius | 450 | 476 | 27 | - | – | |
| PRINTS | 455 | 476 | 22 | 1.5E-27 | ||
| Phobius | 477 | 487 | 11 | - | – | |
| PRINTS | 478 | 490 | 13 | 1.5E-27 | ||
| TMHMM | 485 | 504 | 20 | - | – | |
| Phobius | 488 | 509 | 22 | - | – | |
| Phobius | 510 | 520 | 11 | - | – | |
| TMHMM | 514 | 536 | 23 | - | – | |
| Phobius | 521 | 539 | 19 | - | – | |
| Phobius | 540 | 579 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0285500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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