Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0288900 |
| Transcript ID | LotjaGi6g1v0288900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquinol oxidase; TAIR: AT4G22260.1 Alternative oxidase family protein; Swiss-Prot: sp|Q56X52|AOX4_ARATH Ubiquinol oxidase 4, chloroplastic/chromoplastic; TrEMBL-Plants: tr|Q2HTI6|Q2HTI6_MEDTR Ubiquinol oxidase; Found in the gene: LotjaGi6g1v0288900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60590030..60595129) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTCCTATTAAAATATGAGAAATGAATGAATTTGAAAAATATAAATATCAGCATCTCCATATGCTCCAAACACAA ATATCTTGTAATAGTATATTTGTCCAATCCACCACCACCAACTCACAGCATATGCCGACGGCTGAATCCTCCAAGTCGCC GGAAAATGCCGTAAACGCCGACTACGACTTCCACCAAACGACAAACAAATCATGGAGATTCCACTAGCTTTTTCCGTCTT CGCACTTTCCATTTCTTCAATTTCTTAAACACTTTCCAGTTTCCATTCTTCATCTCCACAACCTACCACCCACCACCATG GCGGCGATTTTCTCTTCTTCAATCTTCTCAACTTCATCTCTCAACAAATCGCCATCTTCACACTACCCTCACAGACACCA CAATTTCAGCCCCCTTTCACTTCGTTCACCACTTTCCAGGTTCGTAATCTTCAACCTTCTTCTCTCCTCTGTTACTGTTT GTTATTGTTATCATTTCCGTTCTCTGAAATCTGAACTGGAGCTTCATCTTGTTCAGGGTACGTGCAACTGTTGTGAAAGA CACAGAGGGTAAAGTGGTTGTGGAGAAGACTTTTCCCTCCAAGATCCCTCTGCAAACTGGTGCTGAGGAGAACGTGAGTG ATAGTGATAGTTCACCCCCCACTGCTTTTGAGTTGGGGGTTATCAAGGTTGAACAATCAATCAATATCTTCCTCACGGTA ATGCTTTTCTTCTTTGTTTATCTCAACATGCTGGTGTTTTGGCTCAAATTTCGTTGTTATATTGTTAATTTGTTATTTAT TGTTCATATTCAGCTATTCAATTCACTTGTTATGAGAGATATACATATTTTTGGGGCAGGGGAGTATTGGTTTGAAGTTG GTCTAACATTGAGATATTGATCACTTAAAAATGTTGGAAAATATTTTTCAGTTGCCCAATTTTCAGTTAGTCGTGAGTTG AGAAAATGGCTAATAGAGAAACAATTTACATACATATGAGCCTCGTTTTGAACTTATTTGAGTTTATCTTATGGAAAAAG CACTTATGCAAGTGTTTGAGAGAGTTTATTTAAATAGCTTATGACCTACCTATAAGCTGTTTTGAGCTTAATTTCGTGAG TTGTTTAAATTAGCTTATGAATAAGAAGTTATGCTTACCTATGTCCTATTTTGATTTTCAACTTATTATGCAATATGATT GACATATCATACTATTATAGTATGGTTTCAGCTAAAAATTTGATCAAGGGGGGCTTTCTCATTTTTTATCTTATAATTGA CTGACCATTCTCTCATTTTTTAGCTGTACGTTATAGTCTTGAATTAACCATTCTGCTTTTGGGGATTGTTATTCATAAAA TAAAGGTTCTCATTTTTGTTGTTTTATTACTTATTTTCGGCTTCACTGATGATTTCAGGATTCTGTGATAAAGATACTAG ATGCTTTATACCGTGACAGAAATTATGCAAGGTTTTTTGTGCTGGAAACTATTGCGAGAGTTCCTTACTTTGGTAAGTGA TATTTTTCAAATAATATGTATGGCATTGAAATCTAATCAGTGCTATCCTTACTGCTACTTATTAAACAATTTTTGTTTTT AAAGAATAGACCGGTATATCAGCTGAGTTTTCCTATAACATTCATCATAATGGAGGGAACTACTATTCTCTAGCTGTACT TTAGTGAAAATTACTGATCTACTTTAGCATCATACTCAATTATGTATTTATGATTTGTAAATATAGGGAGTCAGTGTGCA TTGTGATTGAACTTTTCATTATTGATTTTTGTGTATATGTCAGCCTTTATGTCAGTTCTCCACATGTATGAGAGTTTTGG CTGGTGGAGACGGGCAGATTATCTGAAAGTGCACTTTGCTGAGAGCTGGAATGAAATGCATCATTTGCTCATTATGGAAG TAAGATATTTATCAACTTCTTTTCATTCAATAAAACTGCAATCTTTCTGGTTAATCCTCAATAGATGCCACTCCAAGTCT ACCCTTGAGTTCAGTTTTTGAAGGATCAGTAGTTGAATATATTAGGGTAGGACTAAAGGGTCGAATCAGAAGATCTTTAC TAAAAGCAGGAGAAAATGACCCCTGACAATATCTATGCTCATATGTGTAGTTTAAGGGGTATGTGCCACATTTTCTAAAT GACACATAAAAATTTTCTATTTTAGTTTAAGGGAATTTTAGTTACAGTTTAAGCATTCATAGAAATGACACAACTTCTAA AATATTTCGTGTTCTTTTATTTGCTTTGGAGAAGCATTCACAGAAATGATACAGATAACTGTTTTATGGAAGATTTTTTT TCCTGCACCAACCATGTAAAATGTTTCTCTGGAAAAGTTTTTACTCTGAACATTAGAAAATATTTTCTGGAAAAATATTC TCCATAAAATAGATGGACCCTTACATAAAAAAGAGAACATATACTTCTGGCGGGAGTTTTTGCAAGTTTTGTAGTATACT AGTATATGATCACATAGATGTTGACTCTGTTATTGAACACTTTCGTTTATGCAATAAGCGTGGACCTCTGATTGCAGGAA CTTGGGGGGAATGCTTGGTGGTTTGACCGCTTTCTCGCTCAACATATTGCAATATTTTATTATTTTATGACAGCTCTAAT GTATACGATAAGCCCAAGAATGGCATGTAAGTATTAAGTGCTTTCACTTTTGTTTCATTACAATTCCCACTACATCTGTC AGTTTATTTTTTGGATTATTATGGAATTTTAGTGAAGTGATTGTATACATATGATGATGGAGTTTGAAGACACCAAACGA AAAATTGGCACTTGTTTGATTGAAAAGATAGAAGTTGACTGCACTTATTTGCGTAGTTATATCTGTGGTGCTGGTAAACC AGAAGTATCCAAGATGTCCACATGGTGTTCTTCTTAGCCTAATTGATAAAATGAAAATGAAGAAACAATGAATATTAAAC TGCATATCTGAACTTAAAACAACTAAAATGATGCAGCCGATTAGCACGAGTTAACAAGAATGAACAAACTGACTAGTTTG CTTTTAGTAAAATTATCTACATTAAACAACCATGTTTGACTGAATCACACATTGCTACATTCTATACCTGTCTGCTTGGT TATTCAATTGCTGATTTTATGTGTATGGTTTGTTGCTAGTGCAGATCACTTTTCTGAATGTGTAGAGAATCATGCATTTG AAACTTATGACAAGTTTATCAAGGACCAAGGAGGTATTTTGGAGGTTTCTTCTCTTTTTTGTGTTATCTACATTTTAATT GCATTTGTTAATAGTTTATGCTGTTAGTTGTACTTGTATGCTTTCATAACTGGGGCAGAAACCACTGGATTATAATTATC TTGCTCATGCGTCATGATTTGTTTGATGCGAAAGTTAATTAAGATAAAATGAACTATTATTAGGATGTAATATGGTTTTA AATGAGAAAGCTGACGTATGTTATCTTATCTGTCTTGAATTAACTTGTTCAGGAAATGAATGACCTTAGTTTTTTCATAT AAACTGAAAAGAAAAGAATGGTCCTGCGTTGGTTATTTAATGAATAATATATTTATTTCATTTGATAAAGGTTCCAAATT CCTCTTTGTGAATCTTTTGTTATGCTGTTTGTTTCATGTGATTCAATAACTCTTAGTCTCTTACATAGTTTGATAAATTT TTTGCAGAGGAATTGAAAAAGTTGCCGGCACCTGAGGTTGCTGTGAATTATTATACAGGAGGTGACTTGTATTTATTTGG TAAGCTTTTCATTCTTATGAATATGACCTAAGGTTGTTTACTGGTGAAAAAAACTGGAATTTTACACTTGTGTGATTTTC CTCAGATGAGTTTCAAACTTCCAGAGTTCCAAATACTAGAAGGCCTAAGATAGGTATGTCTCGAAACCTGGTCCACCATT CATTGCTACGCTGAATCTGTTGTGTAGTTTCTCATTTCAAAAATTGATTCTGATGAAAGAAAAATTGATCCAAACATGCT ATTATTTATCATTATGCACATTGTTTATCAATTGCGTGGTAAATTGGTCATGTCCTAAAGTGGAAATATTGTACTCAAAA CTCCTTTACCCTTATAATTTTATTATGATTTCAGGTTAGGTGATTGTCTAAGGAACAAACTAAATACTGCAATTGATTGC CTTGTACTTATTCATGCAGTGAAATTTCTCATATTGATGATTAACGACATTTTTATCTCCCCTGTAGAGAATCTGTACGA CGTATTTGTAAATGTCCGAGATGACGAAGCTGAACATTGTAAGACAATGAAGGCTTGTCAAACCCATGGGAACCTCCGGT CACCTCATTCATATGCAGAGGATGATGAAGACACAGTGTGTCCTCTTGAAGCAGATTGTGAAGGAATAGTAGACTGTATA AAGAAATCTGTCACTTCTAGTCCAGCTAAGGTGAAGTAAGATACGGTTTAATACAGAATGCATTCATTTAAAAGAATAAG GTTCGAGGCATGAACAATGATTATAGTTAGTGAATAGATGAAAATTGTATAAGCTTCTTCTATAGTGATTCTTTCTTTGA AATGAGCGAGCAACCGCGACTTCTAAATTTCAATTGATCAAGGTCATATATGTACTTCATATTAAATCATAGTGATACAC ATTTATTTACAAATATGTAATGGGTCCTTTGCTAAAGAGCATCGAAAGTAATATTGTATTTTAAGTTAAGAGACAGGCTG GTTTAATATGCAAAAAAACCAATTTTTTGTAAGGCTTCTTCTGTCTACCCTGTTTGAGTTTAGGTTTCCCTGTTTGATTT ATGATTTTGTTCTTCATTTAATGGAAACGTGTAAAAAGAGTAGAGTCAATTAATTTGTTGAAATCCATATGACCAATGTA CAAAACCAACAAAGAAATCAAAGGGACCATAATGTAAGAGAGAGATCATTGAAGGCAAGAGCTCAGAAAATTAAGTGAAT ATATCATATATGCATACCCTGCATCTGAATCAGACAGCTATGAAGTAGATACATCTCTTCCTATGCCTAAATCCAAATGT AACAATTAACCCTGTCAAAAAAAATGTATAACAATTAACAACATTTGCTGGTGTTCTCAA
CDS sequence (LotjaGi6g1v0288900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGATTTTCTCTTCTTCAATCTTCTCAACTTCATCTCTCAACAAATCGCCATCTTCACACTACCCTCACAGACA CCACAATTTCAGCCCCCTTTCACTTCGTTCACCACTTTCCAGGGTACGTGCAACTGTTGTGAAAGACACAGAGGGTAAAG TGGTTGTGGAGAAGACTTTTCCCTCCAAGATCCCTCTGCAAACTGGTGCTGAGGAGAACGTGAGTGATAGTGATAGTTCA CCCCCCACTGCTTTTGAGTTGGGGGTTATCAAGGTTGAACAATCAATCAATATCTTCCTCACGGATTCTGTGATAAAGAT ACTAGATGCTTTATACCGTGACAGAAATTATGCAAGGTTTTTTGTGCTGGAAACTATTGCGAGAGTTCCTTACTTTGCCT TTATGTCAGTTCTCCACATGTATGAGAGTTTTGGCTGGTGGAGACGGGCAGATTATCTGAAAGTGCACTTTGCTGAGAGC TGGAATGAAATGCATCATTTGCTCATTATGGAAGAACTTGGGGGGAATGCTTGGTGGTTTGACCGCTTTCTCGCTCAACA TATTGCAATATTTTATTATTTTATGACAGCTCTAATGTATACGATAAGCCCAAGAATGGCATATCACTTTTCTGAATGTG TAGAGAATCATGCATTTGAAACTTATGACAAGTTTATCAAGGACCAAGGAGAGGAATTGAAAAAGTTGCCGGCACCTGAG GTTGCTGTGAATTATTATACAGGAGGTGACTTGTATTTATTTGATGAGTTTCAAACTTCCAGAGTTCCAAATACTAGAAG GCCTAAGATAGAGAATCTGTACGACGTATTTGTAAATGTCCGAGATGACGAAGCTGAACATTGTAAGACAATGAAGGCTT GTCAAACCCATGGGAACCTCCGGTCACCTCATTCATATGCAGAGGATGATGAAGACACAGTGTGTCCTCTTGAAGCAGAT TGTGAAGGAATAGTAGACTGTATAAAGAAATCTGTCACTTCTAGTCCAGCTAAGGTGAAGTAA
Protein sequence (LotjaGi6g1v0288900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAIFSSSIFSTSSLNKSPSSHYPHRHHNFSPLSLRSPLSRVRATVVKDTEGKVVVEKTFPSKIPLQTGAEENVSDSDSS PPTAFELGVIKVEQSINIFLTDSVIKILDALYRDRNYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAES WNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTALMYTISPRMAYHFSECVENHAFETYDKFIKDQGEELKKLPAPE VAVNYYTGGDLYLFDEFQTSRVPNTRRPKIENLYDVFVNVRDDEAEHCKTMKACQTHGNLRSPHSYAEDDEDTVCPLEAD CEGIVDCIKKSVTSSPAKVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 119 | 119 | - | – | |
| PANTHER | 17 | 322 | 306 | 5.7E-155 | – | |
| PANTHER | 17 | 322 | 306 | 5.7E-155 | ||
| Gene3D | 85 | 250 | 166 | 6.9E-25 | ||
| Pfam | 109 | 294 | 186 | 3.0E-37 | ||
| CDD | 112 | 298 | 187 | 2.90596E-98 | ||
| Phobius | 120 | 141 | 22 | - | – | |
| Phobius | 142 | 182 | 41 | - | – | |
| Phobius | 183 | 202 | 20 | - | – | |
| Phobius | 203 | 340 | 138 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Alternative oxidase activity | Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0288900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…