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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0304100 |
| Transcript ID | LotjaGi6g1v0304100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G18840.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16; TrEMBL-Plants: tr|G7IFL9|G7IFL9_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi6g1v0304100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62155438..62159767) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGACCAATGATCGATGCAGTCCTCACCGATTAACCACCAAACAACACAATACAGGATCGATCAGGATCCACATGCT GCATGCATTTTGTTAATTATCAACATTCATTCAACAACTTGCAGGAACAACTCCAAGGGATCCAGCTTCTAATCCAGGCA CTTGCAAACGCTGCTGACAGCTTCATTCCCACGTGCCACTCCTAATTTCACACGTTTTCTTATTTTTTTTCTAACAAAAA TTTGGGGTGAGGGGATGGTGTCTCGGTCTAAAGCATGAAAAACTACCGGGTCCAAAGAACACTTACAAAAGACTTGTAGG GTTCGAAGTTCGAACTTGCAACATGTTATGTAAATGAGACTCTATCATGTTCCACTATACCAACCTTGACATTATTTGCA TGCTTCAAAATACTAATTAAATAAATATAATTCCGTATTATACTTGCTTAAGTTGATGTTTCAATACTTTTAGTCTCTTT TTATACTTTTTTAGGTCAAACTATAAATACTATAATGATATTTGATACGTAAGAAGCTCTTTTTTAGGTGAACATATAAC TATACAGTTCACATTTGTAATTATAACTATTTAAAAATGTCAAGGAACTATTGTAAATAATAAGCATGTATGTAATGTAA ACTTGTATGCAATATATAGCATGCTTTTGTGTGTTCTCTTTCACAACATTGCTAGAGAGCTAGCTATTGAAGAAAATGGC AATTGAGCAACACAATGATGTTGAGAGTGGAGAAGCCAATGGGGTTCAGCATTTGCAAGAGCCCTTCATTTCTAAAGAAG TTGAATCAGATAAAGGTGTGGAAAATGGATCCATTGGAATGGTTCTGCTCAGCACATTTGTTGCTGTTTGTGGTTCTTTT TCATTTGGAACTTGTGTAAGCATCTTTAACCTTTCTAAAATCTTTAATCTAAGGAAGAAACAATCTGAAAATACGCTTCA CAACATGTTTACTTTATTGTTCTGTTTTCTTGATTAGTTAGGAATCAAATTCACCAAAAATTCATAAACAGAAAAGGTTT CTAAGCTAAAGTCATTATTTTGGCAGGTGGGGTATTCAGCGCCAACTCAAGCGGCTATCAGGGCAGATCTTAATCTATCA CTTGCTCAGGTAGGTATTCAATTCAAGTTAGCTTTCCCTCCTCAGTGGCATTTTATACCATGGTCTCTATTTTAATTAAA AAAAAATTTTTCTTTTCAAATTTTGGGGTTTGGCAGTTTTCAATGTTTGGTTCTTTGGTGACCATTGGTGCAATGCTTGG AGCTATAACAAGTGGCAGAGTTACTGATCTACTTGGAAGAAAAGGGGTATCTGAAATCATGTTACTAATTAAAGCTTAAT CTCTAAATGCCGAATAAATATATTTTGAACCATGTTACTAATTAAGCTTTATTTTCATGGAAAACACAGGCTATGAAAAT TTCCACAGGATTTTGTATTGCAGGATGGTTATCTGTCTTCTTTTCCAAGGTATGCAACATGTGCTCATCTTAAGATAAGT TGTTGCAAAATAATAAGAAAAAGGTTGAAGAACTTTATGATGTTCTATATCTATTGCAGGGTTCTTACTCACTTGATTTG GGAAGATTTTTCACAGGATATGGAATTGGAGTTATTTCATATGTGGTAACTAATTTGACAACCTTACAACTAATTTACCT TCACTCTATGTTGTCTCTTCACTAACAAAGATCACTATATTGGACAGGTTCCAGTATATATAGCAGAAATAGCACCAAAA AATCTTCGAGGAGGACTTGCAACAACAAATCAGGTGAGTGAATATTTTGAATTATTGTGTCTTGTTCTTTGATTCAAATT TAAGTATACTGGAATTGAATTTTGGAATTGATTTCAATTGTTTTGTAGCTTATGATTGTTATTGGATCATCAGTCTCATT CTTATTGGGAAGTCTCATAAGTTGGAGAGAATTGGCACTGGCAGGTATATCTATTAAGATTAGTTTTCAACTGTTGCTTG AGATGTAACAAGTTTTAGAGAATTTAAAAGGTTCTAACTGTTGGCTTGGCTCGAACTTGAAGGCCTAGTTCCTTGCATTT GTTTGCTGGTTGGTTTGTGCTTCATCCCTGAGTCTCCTAGATGGCTGGTATGCATTAAGCCAGAATCTAATTAAATATAA AGAGAGAGATAGACACAAAATTTTCACATGGCAGTGTCATCTGAGATTTTCATGTGAGAAGATCCTGATCAGGCATAATT TTTTTTTTTCCGGCAGGCAAAGGTTGGCCGTGAAAAAGAATTTCAAGTAGCTTTAAGGAGACTTCGGGGTAAAGATGTTG ATATTTCTCATGAAGCCACTGAAATTCTGGTACTTTACAAGCTCCTTTAACTCATTGAAAACCTTAAAAGAAAATTTCCT AATAATTTGACATGTTTGATGACACTTATTTTTGGCTAATAGGATTCCATTGAAACTCTTCAAAGCCTTCCGAAGTCTAA ATTGTTGGATTTGTTCCATACCAGATATGTGCGCTCTGTAGTTGTAAGTAACATACTTGCATCTAAATTTAATCACAGTA TAAGTAATTGCTCAAATTATTTAACTACTTTTCACAATTTCAGATCGGAGTTGGGTTAATGGTATGTCAACAATCTGTTG GAATTAATGGTATAGGATTCTATACAGCAGAGACTTTTGTAGCAGCCGGTAAGTGAAAACAAATTCATCCAAATCTTGAA AAATCAATGGAAATATTAAATAAATTTCACCTGTTACATTTATTCCTCTATAACTCGATTTGCAGGAGTTTCTTCTGGAA AAGCTGGTACCATAGCCTATGCTTGTATTCAGGTACTTGATTCCCCGTCCCTCTTCTGATGATCTCTCAGAACTAACCAT ATATATAGAACTACATTATTCTGTCTCTGAACATCATCTGTTACATTGAATTATAGGTTCCATTTACCATATTGGGAGCC ATTTTGATGGATAAATCTGGAAGAAGACCTCTTATAACGGTAAATCTATTTGAAAGAACTTATTTATCAATGCTAGTAAG AACATGTATGCTTAACATAATTTCTTGTATATATGCAGGTTTCTTCTGGTGGGACATTCTTAGGCTGCTTTATTACTGGA ATTGCTTTCTTTCTCAAGGCAAGTCATTATTTTAAATGTATTACATTTTCACCACAAATAGTGTGTTTTTGTATCGATTC TAAAATCCATCTTCATGACTTCATGAATCAGGATCAAGGCTTATTGCTTGAGTGGGTGCCGACATTAGCAATTGGTGGTG TGTTGGTGAGTTTTTGCATCAACTTCTGTTTTTCTGTCTTCTGTTTGCTTCTTTTTTAAGCTATGGCAATAGTTGATAGT GTAATCTTATAGTACTTATATTCCAGTTTAACATGAAATTCTCTCATTTCTCTTTTTTTTTCTTCTTCTTCTTCTAATCA GATCTATATAGCAGCATATTCAATTGGATTGGGGTCTGTTCCTTGGGTGATAATGTCCGAGGTATGTATCATGTAACACA AAAAATAAGCGAGCGTGTTAGAAATACAATATAAAATCATTCATGTGTCTTCATCCATCAACTTAAGCTTTTGGGATAGT TAGTTAATGATAGGCGACAACGGAAGAAATATATGTTCTTATAATACTTCTTATATTACAGGTTTTTCCCATACATATAA AGGGAACTGCTGGGAGCTTGGTGGTTTTGGTGACCTGGCTAGGAGCTTGGGTGGTTTCATACACTTTCAATTTTCTTATG AGTTGGAGTTCTCCTGGTAAACACAGTTAGTTGGCATTTTTACCTGCATCTGATTGTGACTATCATTAGTAATAACATGT GTTTATATTGGTTTTTGACAGGTACTTTGTTTTTGTATGCTGGATGTTCCCTCTTAACTATTCTATTTGTAGCAAAAGTA GTCCCAGAAACCAAAGGAAAAACATTGGAAGAAATCCAAGCTTGCATCAGTTCATAGAAAGAAAAAAAGGAGAGCAATTT CTTGTACTATTTGATGATGGAAGGTGAAGCCTAATAGCACACGGGGACCCTGTCCAATTATTGTATTTGATTTATTAGCA TCATTGATCTAATTCTTTTGGATCCATATAGGAGATCGGCAAGGAATAAAATAACAGAATTTTGATATATTCACATTTTA GGTTCTGAATAAGAATATGTTATTAGCATTAGCTTTGCTCATAAGAGAATTTTCATATTCTATTCACTGTGCCAGTGTGC CTAGGTCTCTTCTGATTTTTGCTTCTTCTTTCTTTTGGTTTTGAGGATTCTTTTTTGGTTTTCTTTCCGCTAGAAAAAAT AATAATTTTC
CDS sequence (LotjaGi6g1v0304100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATTGAGCAACACAATGATGTTGAGAGTGGAGAAGCCAATGGGGTTCAGCATTTGCAAGAGCCCTTCATTTCTAA AGAAGTTGAATCAGATAAAGGTGTGGAAAATGGATCCATTGGAATGGTTCTGCTCAGCACATTTGTTGCTGTTTGTGGTT CTTTTTCATTTGGAACTTGTGTGGGGTATTCAGCGCCAACTCAAGCGGCTATCAGGGCAGATCTTAATCTATCACTTGCT CAGTTTTCAATGTTTGGTTCTTTGGTGACCATTGGTGCAATGCTTGGAGCTATAACAAGTGGCAGAGTTACTGATCTACT TGGAAGAAAAGGGGCTATGAAAATTTCCACAGGATTTTGTATTGCAGGATGGTTATCTGTCTTCTTTTCCAAGGGTTCTT ACTCACTTGATTTGGGAAGATTTTTCACAGGATATGGAATTGGAGTTATTTCATATGTGGTTCCAGTATATATAGCAGAA ATAGCACCAAAAAATCTTCGAGGAGGACTTGCAACAACAAATCAGCTTATGATTGTTATTGGATCATCAGTCTCATTCTT ATTGGGAAGTCTCATAAGTTGGAGAGAATTGGCACTGGCAGGCCTAGTTCCTTGCATTTGTTTGCTGGTTGGTTTGTGCT TCATCCCTGAGTCTCCTAGATGGCTGGCAAAGGTTGGCCGTGAAAAAGAATTTCAAGTAGCTTTAAGGAGACTTCGGGGT AAAGATGTTGATATTTCTCATGAAGCCACTGAAATTCTGGATTCCATTGAAACTCTTCAAAGCCTTCCGAAGTCTAAATT GTTGGATTTGTTCCATACCAGATATGTGCGCTCTGTAGTTATCGGAGTTGGGTTAATGGTATGTCAACAATCTGTTGGAA TTAATGGTATAGGATTCTATACAGCAGAGACTTTTGTAGCAGCCGGAGTTTCTTCTGGAAAAGCTGGTACCATAGCCTAT GCTTGTATTCAGGTTCCATTTACCATATTGGGAGCCATTTTGATGGATAAATCTGGAAGAAGACCTCTTATAACGGTTTC TTCTGGTGGGACATTCTTAGGCTGCTTTATTACTGGAATTGCTTTCTTTCTCAAGGATCAAGGCTTATTGCTTGAGTGGG TGCCGACATTAGCAATTGGTGGTGTGTTGATCTATATAGCAGCATATTCAATTGGATTGGGGTCTGTTCCTTGGGTGATA ATGTCCGAGGTTTTTCCCATACATATAAAGGGAACTGCTGGGAGCTTGGTGGTTTTGGTGACCTGGCTAGGAGCTTGGGT GGTTTCATACACTTTCAATTTTCTTATGAGTTGGAGTTCTCCTGGTACTTTGTTTTTGTATGCTGGATGTTCCCTCTTAA CTATTCTATTTGTAGCAAAAGTAGTCCCAGAAACCAAAGGAAAAACATTGGAAGAAATCCAAGCTTGCATCAGTTCATAG
Protein sequence (LotjaGi6g1v0304100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIEQHNDVESGEANGVQHLQEPFISKEVESDKGVENGSIGMVLLSTFVAVCGSFSFGTCVGYSAPTQAAIRADLNLSLA QFSMFGSLVTIGAMLGAITSGRVTDLLGRKGAMKISTGFCIAGWLSVFFSKGSYSLDLGRFFTGYGIGVISYVVPVYIAE IAPKNLRGGLATTNQLMIVIGSSVSFLLGSLISWRELALAGLVPCICLLVGLCFIPESPRWLAKVGREKEFQVALRRLRG KDVDISHEATEILDSIETLQSLPKSKLLDLFHTRYVRSVVIGVGLMVCQQSVGINGIGFYTAETFVAAGVSSGKAGTIAY ACIQVPFTILGAILMDKSGRRPLITVSSGGTFLGCFITGIAFFLKDQGLLLEWVPTLAIGGVLIYIAAYSIGLGSVPWVI MSEVFPIHIKGTAGSLVVLVTWLGAWVVSYTFNFLMSWSSPGTLFLYAGCSLLTILFVAKVVPETKGKTLEEIQACISS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | - | – | |
| PANTHER | 18 | 479 | 462 | 6.6E-279 | – | |
| PANTHER | 18 | 479 | 462 | 6.6E-279 | – | |
| Gene3D | 39 | 478 | 440 | 1.5E-116 | – | |
| TIGRFAM | 39 | 473 | 435 | 1.7E-85 | ||
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 43 | 65 | 23 | - | – | |
| SUPERFAMILY | 44 | 474 | 431 | 8.5E-57 | ||
| CDD | 44 | 472 | 429 | 6.65655E-180 | – | |
| ProSiteProfiles | 46 | 466 | 421 | 40.132 | ||
| Phobius | 66 | 76 | 11 | - | – | |
| Pfam | 70 | 475 | 406 | 4.1E-86 | ||
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 77 | 99 | 23 | - | – | |
| Phobius | 100 | 110 | 11 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – | |
| Phobius | 111 | 129 | 19 | - | – | |
| Phobius | 130 | 140 | 11 | - | – | |
| PRINTS | 137 | 156 | 20 | 2.2E-15 | ||
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 141 | 159 | 19 | - | – | |
| Phobius | 160 | 170 | 11 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 171 | 191 | 21 | - | – | |
| Phobius | 192 | 196 | 5 | - | – | |
| TMHMM | 197 | 216 | 20 | - | – | |
| Phobius | 197 | 215 | 19 | - | – | |
| Phobius | 216 | 274 | 59 | - | – | |
| Phobius | 275 | 297 | 23 | - | – | |
| TMHMM | 279 | 301 | 23 | - | – | |
| PRINTS | 289 | 299 | 11 | 2.2E-15 | ||
| Phobius | 298 | 316 | 19 | - | – | |
| TMHMM | 316 | 335 | 20 | - | – | |
| Phobius | 317 | 335 | 19 | - | – | |
| Phobius | 336 | 341 | 6 | - | – | |
| Phobius | 342 | 364 | 23 | - | – | |
| TMHMM | 342 | 364 | 23 | - | – | |
| Phobius | 365 | 375 | 11 | - | – | |
| Phobius | 376 | 400 | 25 | - | – | |
| TMHMM | 379 | 401 | 23 | - | – | |
| PRINTS | 379 | 400 | 22 | 2.2E-15 | ||
| Phobius | 401 | 411 | 11 | - | – | |
| PRINTS | 402 | 414 | 13 | 2.2E-15 | ||
| Phobius | 412 | 432 | 21 | - | – | |
| TMHMM | 414 | 436 | 23 | - | – | |
| Phobius | 433 | 443 | 11 | - | – | |
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 444 | 462 | 19 | - | – | |
| Phobius | 463 | 479 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0304100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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