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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0306700 |
Transcript ID | LotjaGi6g1v0306700.3 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G18610.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q1PDV6|PBL27_ARATH Serine/threonine-protein kinase PBL27; TrEMBL-Plants: tr|I1MF55|I1MF55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62386834..62390647) extracted from Lotus japonicus Gifu genome v1.2.
CACACTCTTACTGATTTTGGGATGTAATATTTGATTTAACAATGAAAACCACATCATTGAGTAATTTTTTATACAAAGGT AGTTTCTTGTATACTTTGCAATTTACCTGATTATAGTCCTTATGCTGTTTTTAAGTATTATGTGATGTTGCACATTACGC GACTGCTTAGTAATTAGCAGCATGAGACTGTGGAATCAGCCTATGTACATGATTTTATGTCTAATTAAACTGATGTGTTT TTCTATTCTTTTCACTCCTGCTTATTCATGCAGACAAATCAAAATCACGAAGTGCCTCAGATCCTAAGAAGGAAACACCT GTTGCAAAGGATGGGCCAACTGCCCATATTGCTGCTCAAACATTTACGTTCCGAGAGCTTGCAGCTGCTACAAAGAATTT TAGGCCAGAATGTTTATTAGGGGAAGGAGGCTTTGGACGTGTTTACAAAGGTCGTCTTGAGAGCACAGGACAAGTAAGTT GTGGTTGCTCCTACAATTTTATTTTACCGTACACATAAGCTCAACCATTACCTCTGATATTAGAAGGATTCACCATTTTT CGCTTTATATTTAATGTTTGTCTGTTACTATGTTGCCTCTCCCTCTTAGTCCCTGTGGTTGAAATCATTTCCTTTGCAGG TAGTTGCAGTAAAACAGCTTGACCGAAATGGTCTTCAAGGCAATCGAGAGTTTTTGGTTGAAGTTCTCATGCTCAGCCTC TTACATCATCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGTGATCAGCGTCTGCTTGTTTATGAATTTATGCC TTTGGGATCTTTGGAGGATCATTTACATGGTCAGATCACGTTCCTTTTAACTGAAACCTTTCCTTCCTTAATTGTTGCGT TCATTTACATTGGAAAATAACAAATGAAGTCCTTCACAAGTCTTAAACAAGAACCTTCTAATTCCAAAACACTGTTAACA AGATGTCTCTATAGTTTACACATAATGTAATGACTCCAATCTCCAAAAACTTTAGCTTGATGTTTTGACAACCATCTTTA CCTCTGTTATTGCTTCTGTCATTGTTAAGGTTCCACATTGACCTGAGTTATGGCCAAATAAGTATTTATAAAGGATAGTG CAATATCCTCGCCACTGGCTTTTGGGGTAGATTTAGGCCTAACCTAAATTCTTAAGATGATATCAAAGTCTATCTTAGAT CCGATAATTGACTCACTCGCATATGTTCAGTCCTTCAAACTTTTCTCTCCTAATGTCCAGACAGGTTGCACATTAACTAG AGATATGACCAAAGAAATCTTTATAAAGGGTAGAGTAATCTCACCTCTGAGCTAGCTTGTGGGGTGGAGTTAGGTCTATC CGAATTTTATGAGCATAGGGGTGAGTATTTCCATACCTTTTGTTAGGATTTCTTTGGTCATATTTCTAATCAATGTGAGA CCTTAGTCGTCATTGCCTTTCCATGACCACCACTATCATCACTCTCTGCTGTCACCATTCCCTTTGTTCCCTCTCCCTCC GCCTCCACCACTGTTACCTATACCACCCTTCATCTCGACCACCATTGCCACTACTATCACATGGTTACCACCAATGCTAG CCTACCATCACCACTACATTCTCTTGCTGTTTCACGACACCGTTAATTGGTACCATCTATGTTTCCACTATTATCTTTCT TTTGAAAAACATAGACCATTTCTAGTTAGTATCAACTCTGGGACTTCAGAAAATTAAATGAATATTTTGGATGGAAGGGA TGTTTAAAACTTCATCACCTGAAGTTTTATAATTGTTAATAAGATGTTCAAATTAGCTGTAGGTTCTAAAAGTTACAAAA TGAGGAAAAACGGCCCTGGGATGCCCATTCTTTCTTTCTCAGTGTCAGTAAGACGTTCATTTACTTTAAACGACTGAAGT ATATTACGTTTCATCTTTCAAGGGAAGGGAGTACTTTTTAAAATAGAGGGTGGGTCAGGATTTGAGGGTCTCTTCGGGAA AAGCAGTGTTATTTACCTTTTCACCTCTTAATTTCTCGTGCAATCCAAACTTTAAGATTCTGACTAATTGACCTGAACTA AAGCCAGCATTGATTGATTCTAAACCTTATGTGTGTGTGTTTGCGTGTGTGGGTCGTATGGTAATCCTCAATGACACTGC TGAGGAAAACTCAAAACAAATGAACAATCATGTAAATGGCAGCTGGGGATCAACAAAGTTAATAGCTAATTATTGAAGAT AAGGCTTTCTTTCAATACATTTATCTTCAATGATCTTGTTATGGACATGAGCTGTCTTAAGTAAAGTTTGATTCAGATCT GAAATTCTGAATTGATGTCACCTAGGAGGCTTGGTATTGTCATCTATCTAGTTACAGTCTAAAATCTGAGCTTTGTTTTC ACAAATAAAAGAAAATAAATATCTTCCTGTATTGCAGTTTAGACCTTTTGTGTTGCTTGATCTAGTGCTTGCTGGTTTAT GTTGCATCTGTAAATATGATGAATTACATGTGAACTGGCAGGGCTCCATGATGAACAGACCCTTGGATAAGTTATTTAGA AGTACATTATAGTGTCGGTTTACATTACTGATAGTCATTGCTTTTACAATTGTATGTTATTATTAGAATCTCCCAAGAAA GGTTTCAGCTTATCCACTGTAGAACTTCCTGACTCTGAATCTCTTTCCAGGAGACAAGGAGCCTCTGGACTGGAACACTA GGATGAAAATAGCTGCTGGTGCGGCAAAGGGATTGGAATATTTACATGACAAAGCAAACCCCCCTGTGATATATAGAGAC TTAAAATCATCCAACATCCTCCTAGATGAGGGTTTTCATCCCAAGCTATCAGATTTTGGGCTGGCAAAACTTGGGCCAGT TGGCGACAAGACTCATGTATCTACACGAGTAATGGGAACATATGGCTATTGTGCCCCAGAATATGCTATGACTGGTCAAC TAACTCTGAAATCTGACGTCTACAGTTTTGGAGTTGTCTTCCTTGAACTTATCACTGGGCGCAAAGCCATTGATAACGCG CGTTCACATGGAGAGCACAATCTTGTTGCTTGGGTAAGTACATCACCTGCTCATCATTTTGTTAGTTTGTAGGCTGTGTA CATTACGTGAATTTGTTTGTACTTAACTGTTCTGATCAGCTTCTGGATTAACATAAAACAAATTCACTGCCATTTGTCTT CATATTCGACTTTGCAGGCACGTCCTCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCCGACCCTCTACTTCAAGGC CGTTATCCTATGCGAGGGCTGTACCAAGCACTTGCAGTCGCAGCAATGTGTTTGCAGGAACAAGCTGCTACTAGGCCGCT TATTGGGGATGTTGTGACTGCTCTCACGTATCTGGCTTCCCAGACATATGATCCAAATGCACCCAATCAGTCTACCAGGG TTGGTCCATCAACCCCCAGGAGCAGGGATGACAGGAGGAGCATGGCAGAAAGTGTAGATAGCCCAGACCGTGGCCGACTC GGCTCCCCTTCCACCCACAGAAACTCACCTGACTTCAGAAGGAGAGATGGCAGGGATCCAAGTGCTGGGAGCGACAATGG TGGCGGGTCAGGGAGAAAATGGGGATTGGATGAGTTAGAAAGACAGGATTCTCAGAGAGACAGCCCTGTGAGTGCTGGAA GAGCTAGAGAGACTCCAAGGAACCGCGACCTCGACCGAGAACGCGCAGTTGCTGAAGCAAAGGTTTGGGGTGAGAATTGG AGAGAGAAGAAGAGAGCAAATGCAATGGGGAGCTTTGATGCTACAAATGAGTGA
CDS sequence (LotjaGi6g1v0306700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAGCCTCTTACATCATCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGTGATCAGCGTCTGCTTGTTTA TGAATTTATGCCTTTGGGATCTTTGGAGGATCATTTACATGGGCTCCATGGAGACAAGGAGCCTCTGGACTGGAACACTA GGATGAAAATAGCTGCTGGTGCGGCAAAGGGATTGGAATATTTACATGACAAAGCAAACCCCCCTGTGATATATAGAGAC TTAAAATCATCCAACATCCTCCTAGATGAGGGTTTTCATCCCAAGCTATCAGATTTTGGGCTGGCAAAACTTGGGCCAGT TGGCGACAAGACTCATGTATCTACACGAGTAATGGGAACATATGGCTATTGTGCCCCAGAATATGCTATGACTGGTCAAC TAACTCTGAAATCTGACGTCTACAGTTTTGGAGTTGTCTTCCTTGAACTTATCACTGGGCGCAAAGCCATTGATAACGCG CGTTCACATGGAGAGCACAATCTTGTTGCTTGGGCACGTCCTCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCCGA CCCTCTACTTCAAGGCCGTTATCCTATGCGAGGGCTGTACCAAGCACTTGCAGTCGCAGCAATGTGTTTGCAGGAACAAG CTGCTACTAGGCCGCTTATTGGGGATGTTGTGACTGCTCTCACGTATCTGGCTTCCCAGACATATGATCCAAATGCACCC AATCAGTCTACCAGGGTTGGTCCATCAACCCCCAGGAGCAGGGATGACAGGAGGAGCATGGCAGAAAGTGTAGATAGCCC AGACCGTGGCCGACTCGGCTCCCCTTCCACCCACAGAAACTCACCTGACTTCAGAAGGAGAGATGGCAGGGATCCAAGTG CTGGGAGCGACAATGGTGGCGGGTCAGGGAGAAAATGGGGATTGGATGAGTTAGAAAGACAGGATTCTCAGAGAGACAGC CCTGTGAGTGCTGGAAGAGCTAGAGAGACTCCAAGGAACCGCGACCTCGACCGAGAACGCGCAGTTGCTGAAGCAAAGGT TTGGGGTGAGAATTGGAGAGAGAAGAAGAGAGCAAATGCAATGGGGAGCTTTGATGCTACAAATGAGTGA
Protein sequence (LotjaGi6g1v0306700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHGLHGDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD LKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNA RSHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAP NQSTRVGPSTPRSRDDRRSMAESVDSPDRGRLGSPSTHRNSPDFRRRDGRDPSAGSDNGGGSGRKWGLDELERQDSQRDS PVSAGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 30 | 30 | 5.7E-10 | – | |
PANTHER | 1 | 274 | 274 | 9.5E-155 | – | |
SMART | 1 | 230 | 230 | 9.2E-13 | ||
PANTHER | 1 | 274 | 274 | 9.5E-155 | – | |
ProSiteProfiles | 1 | 230 | 230 | 30.605 | ||
Pfam | 2 | 168 | 167 | 9.7E-35 | ||
SUPERFAMILY | 2 | 227 | 226 | 6.2E-65 | ||
Gene3D | 31 | 246 | 216 | 9.3E-60 | – | |
ProSitePatterns | 76 | 88 | 13 | - | ||
MobiDBLite | 234 | 249 | 16 | - | – | |
MobiDBLite | 234 | 340 | 107 | - | – | |
MobiDBLite | 250 | 265 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0306700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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