Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0306700 |
| Transcript ID | LotjaGi6g1v0306700.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G18610.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q1PDV6|PBL27_ARATH Serine/threonine-protein kinase PBL27; TrEMBL-Plants: tr|I1MF55|I1MF55_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62386834..62390675) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGTATTATGAAAACTTCTTTTGAATCACACTCTTACTGATTTTGGGATGTAATATTTGATTTAACAATGAAAACCAC ATCATTGAGTAATTTTTTATACAAAGGTAGTTTCTTGTATACTTTGCAATTTACCTGATTATAGTCCTTATGCTGTTTTT AAGTATTATGTGATGTTGCACATTACGCGACTGCTTAGTAATTAGCAGCATGAGACTGTGGAATCAGCCTATGTACATGA TTTTATGTCTAATTAAACTGATGTGTTTTTCTATTCTTTTCACTCCTGCTTATTCATGCAGACAAATCAAAATCACGAAG TGCCTCAGATCCTAAGAAGGAAACACCTGTTGCAAAGGATGGGCCAACTGCCCATATTGCTGCTCAAACATTTACGTTCC GAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGTTTATTAGGGGAAGGAGGCTTTGGACGTGTTTACAAAGGT CGTCTTGAGAGCACAGGACAAGTAAGTTGTGGTTGCTCCTACAATTTTATTTTACCGTACACATAAGCTCAACCATTACC TCTGATATTAGAAGGATTCACCATTTTTCGCTTTATATTTAATGTTTGTCTGTTACTATGTTGCCTCTCCCTCTTAGTCC CTGTGGTTGAAATCATTTCCTTTGCAGGTAGTTGCAGTAAAACAGCTTGACCGAAATGGTCTTCAAGGCAATCGAGAGTT TTTGGTTGAAGTTCTCATGCTCAGCCTCTTACATCATCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGTGATC AGCGTCTGCTTGTTTATGAATTTATGCCTTTGGGATCTTTGGAGGATCATTTACATGGTCAGATCACGTTCCTTTTAACT GAAACCTTTCCTTCCTTAATTGTTGCGTTCATTTACATTGGAAAATAACAAATGAAGTCCTTCACAAGTCTTAAACAAGA ACCTTCTAATTCCAAAACACTGTTAACAAGATGTCTCTATAGTTTACACATAATGTAATGACTCCAATCTCCAAAAACTT TAGCTTGATGTTTTGACAACCATCTTTACCTCTGTTATTGCTTCTGTCATTGTTAAGGTTCCACATTGACCTGAGTTATG GCCAAATAAGTATTTATAAAGGATAGTGCAATATCCTCGCCACTGGCTTTTGGGGTAGATTTAGGCCTAACCTAAATTCT TAAGATGATATCAAAGTCTATCTTAGATCCGATAATTGACTCACTCGCATATGTTCAGTCCTTCAAACTTTTCTCTCCTA ATGTCCAGACAGGTTGCACATTAACTAGAGATATGACCAAAGAAATCTTTATAAAGGGTAGAGTAATCTCACCTCTGAGC TAGCTTGTGGGGTGGAGTTAGGTCTATCCGAATTTTATGAGCATAGGGGTGAGTATTTCCATACCTTTTGTTAGGATTTC TTTGGTCATATTTCTAATCAATGTGAGACCTTAGTCGTCATTGCCTTTCCATGACCACCACTATCATCACTCTCTGCTGT CACCATTCCCTTTGTTCCCTCTCCCTCCGCCTCCACCACTGTTACCTATACCACCCTTCATCTCGACCACCATTGCCACT ACTATCACATGGTTACCACCAATGCTAGCCTACCATCACCACTACATTCTCTTGCTGTTTCACGACACCGTTAATTGGTA CCATCTATGTTTCCACTATTATCTTTCTTTTGAAAAACATAGACCATTTCTAGTTAGTATCAACTCTGGGACTTCAGAAA ATTAAATGAATATTTTGGATGGAAGGGATGTTTAAAACTTCATCACCTGAAGTTTTATAATTGTTAATAAGATGTTCAAA TTAGCTGTAGGTTCTAAAAGTTACAAAATGAGGAAAAACGGCCCTGGGATGCCCATTCTTTCTTTCTCAGTGTCAGTAAG ACGTTCATTTACTTTAAACGACTGAAGTATATTACGTTTCATCTTTCAAGGGAAGGGAGTACTTTTTAAAATAGAGGGTG GGTCAGGATTTGAGGGTCTCTTCGGGAAAAGCAGTGTTATTTACCTTTTCACCTCTTAATTTCTCGTGCAATCCAAACTT TAAGATTCTGACTAATTGACCTGAACTAAAGCCAGCATTGATTGATTCTAAACCTTATGTGTGTGTGTTTGCGTGTGTGG GTCGTATGGTAATCCTCAATGACACTGCTGAGGAAAACTCAAAACAAATGAACAATCATGTAAATGGCAGCTGGGGATCA ACAAAGTTAATAGCTAATTATTGAAGATAAGGCTTTCTTTCAATACATTTATCTTCAATGATCTTGTTATGGACATGAGC TGTCTTAAGTAAAGTTTGATTCAGATCTGAAATTCTGAATTGATGTCACCTAGGAGGCTTGGTATTGTCATCTATCTAGT TACAGTCTAAAATCTGAGCTTTGTTTTCACAAATAAAAGAAAATAAATATCTTCCTGTATTGCAGTTTAGACCTTTTGTG TTGCTTGATCTAGTGCTTGCTGGTTTATGTTGCATCTGTAAATATGATGAATTACATGTGAACTGGCAGGGCTCCATGAT GAACAGACCCTTGGATAAGTTATTTAGAAGTACATTATAGTGTCGGTTTACATTACTGATAGTCATTGCTTTTACAATTG TATGTTATTATTAGAATCTCCCAAGAAAGGTTTCAGCTTATCCACTGTAGAACTTCCTGACTCTGAATCTCTTTCCAGGA GACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCTGCTGGTGCGGCAAAGGGATTGGAATATTTACATGACAA AGCAAACCCCCCTGTGATATATAGAGACTTAAAATCATCCAACATCCTCCTAGATGAGGGTTTTCATCCCAAGCTATCAG ATTTTGGGCTGGCAAAACTTGGGCCAGTTGGCGACAAGACTCATGTATCTACACGAGTAATGGGAACATATGGCTATTGT GCCCCAGAATATGCTATGACTGGTCAACTAACTCTGAAATCTGACGTCTACAGTTTTGGAGTTGTCTTCCTTGAACTTAT CACTGGGCGCAAAGCCATTGATAACGCGCGTTCACATGGAGAGCACAATCTTGTTGCTTGGGTAAGTACATCACCTGCTC ATCATTTTGTTAGTTTGTAGGCTGTGTACATTACGTGAATTTGTTTGTACTTAACTGTTCTGATCAGCTTCTGGATTAAC ATAAAACAAATTCACTGCCATTTGTCTTCATATTCGACTTTGCAGGCACGTCCTCTTTTCAAAGACCGTAGGAAGTTCCC CAAAATGGCCGACCCTCTACTTCAAGGCCGTTATCCTATGCGAGGGCTGTACCAAGCACTTGCAGTCGCAGCAATGTGTT TGCAGGAACAAGCTGCTACTAGGCCGCTTATTGGGGATGTTGTGACTGCTCTCACGTATCTGGCTTCCCAGACATATGAT CCAAATGCACCCAATCAGTCTACCAGGGTTGGTCCATCAACCCCCAGGAGCAGGGATGACAGGAGGAGCATGGCAGAAAG TGTAGATAGCCCAGACCGTGGCCGACTCGGCTCCCCTTCCACCCACAGAAACTCACCTGACTTCAGAAGGAGAGATGGCA GGGATCCAAGTGCTGGGAGCGACAATGGTGGCGGGTCAGGGAGAAAATGGGGATTGGATGAGTTAGAAAGACAGGATTCT CAGAGAGACAGCCCTGTGAGTGCTGGAAGAGCTAGAGAGACTCCAAGGAACCGCGACCTCGACCGAGAACGCGCAGTTGC TGAAGCAAAGGTTTGGGGTGAGAATTGGAGAGAGAAGAAGAGAGCAAATGCAATGGGGAGCTTTGATGCTACAAATGAGT GA
CDS sequence (LotjaGi6g1v0306700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAGCCTCTTACATCATCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGTGATCAGCGTCTGCTTGTTTA TGAATTTATGCCTTTGGGATCTTTGGAGGATCATTTACATGGGCTCCATGGAGACAAGGAGCCTCTGGACTGGAACACTA GGATGAAAATAGCTGCTGGTGCGGCAAAGGGATTGGAATATTTACATGACAAAGCAAACCCCCCTGTGATATATAGAGAC TTAAAATCATCCAACATCCTCCTAGATGAGGGTTTTCATCCCAAGCTATCAGATTTTGGGCTGGCAAAACTTGGGCCAGT TGGCGACAAGACTCATGTATCTACACGAGTAATGGGAACATATGGCTATTGTGCCCCAGAATATGCTATGACTGGTCAAC TAACTCTGAAATCTGACGTCTACAGTTTTGGAGTTGTCTTCCTTGAACTTATCACTGGGCGCAAAGCCATTGATAACGCG CGTTCACATGGAGAGCACAATCTTGTTGCTTGGGCACGTCCTCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCCGA CCCTCTACTTCAAGGCCGTTATCCTATGCGAGGGCTGTACCAAGCACTTGCAGTCGCAGCAATGTGTTTGCAGGAACAAG CTGCTACTAGGCCGCTTATTGGGGATGTTGTGACTGCTCTCACGTATCTGGCTTCCCAGACATATGATCCAAATGCACCC AATCAGTCTACCAGGGTTGGTCCATCAACCCCCAGGAGCAGGGATGACAGGAGGAGCATGGCAGAAAGTGTAGATAGCCC AGACCGTGGCCGACTCGGCTCCCCTTCCACCCACAGAAACTCACCTGACTTCAGAAGGAGAGATGGCAGGGATCCAAGTG CTGGGAGCGACAATGGTGGCGGGTCAGGGAGAAAATGGGGATTGGATGAGTTAGAAAGACAGGATTCTCAGAGAGACAGC CCTGTGAGTGCTGGAAGAGCTAGAGAGACTCCAAGGAACCGCGACCTCGACCGAGAACGCGCAGTTGCTGAAGCAAAGGT TTGGGGTGAGAATTGGAGAGAGAAGAAGAGAGCAAATGCAATGGGGAGCTTTGATGCTACAAATGAGTGA
Protein sequence (LotjaGi6g1v0306700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHGLHGDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD LKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNA RSHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAP NQSTRVGPSTPRSRDDRRSMAESVDSPDRGRLGSPSTHRNSPDFRRRDGRDPSAGSDNGGGSGRKWGLDELERQDSQRDS PVSAGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 30 | 30 | 5.7E-10 | – | |
| PANTHER | 1 | 274 | 274 | 9.5E-155 | – | |
| SMART | 1 | 230 | 230 | 9.2E-13 | ||
| PANTHER | 1 | 274 | 274 | 9.5E-155 | – | |
| ProSiteProfiles | 1 | 230 | 230 | 30.605 | ||
| Pfam | 2 | 168 | 167 | 9.7E-35 | ||
| SUPERFAMILY | 2 | 227 | 226 | 6.2E-65 | ||
| Gene3D | 31 | 246 | 216 | 9.3E-60 | – | |
| ProSitePatterns | 76 | 88 | 13 | - | ||
| MobiDBLite | 234 | 249 | 16 | - | – | |
| MobiDBLite | 234 | 340 | 107 | - | – | |
| MobiDBLite | 250 | 265 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0306700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…