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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0307000 |
| Transcript ID | LotjaGi6g1v0307000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA-binding domain-containing protein 4; TAIR: AT5G18590.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4; TrEMBL-Plants: tr|A0A0R0G6J2|A0A0R0G6J2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0307000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62421100..62428445) extracted from Lotus japonicus Gifu genome v1.2.
TGTGCGCCTCCTCTCACTCCCTGCACTCCTCTGTTCTCTCTTCTCTTTCCTCTGTCTCTCTCTCTCTGACTCTGTCTTCA CCGCTTCCACCTTTGATGTCTTGTTATACAGAGCAACCTTACCACTGACCACACTCCATTTTCAGTTCCTTTTTGTTTCC CAACAACTTTCTTAACAATCAAACAGCCTGAGATTTCTCATTACTACAACAATGTTGTTATTGTCATAGTTGCTTTCCTT TAGTTCCACCCCACAATTTTTCTTCCACCATCATTTTGATTTTTTGAGTGTGAACTAGCCAAGCTTAGTAGAATAGAAGA GCTTTTTTGATGTGCCCATGAAAAGTAGCAGTCAAAGTTGCATGCTTTAGAGGGAAAGTCTCTATCTTTGAGGATAATGT AGCATCCCCTTTGTGGGTTTAGGGTTTAGTTTCACTTTGTCTCTTGATCACTCAGTGTTCTTACATGATTTGAGCTTTGA AGAACAACAACAACAAGATGTTTGGTTTCTCTCGTAGGCACATGAAACTTGGCAGGTGGAGATTTTTCCCATTTTCATTG TTTCTTATGGAATTTGAGAGAGCTCTTTACAGTGTTGATGTTTGTTGTTGTGGCTGTGATGTGTTTAACTCAGCAGATTG AAGGTTCAGCTTTCTGACAATACCCAGGGAACTAGAAGTCCTGTGAGGCACCACAAGAGAAATGGAAACTCCAATGTAAG TTTTTTAGTTTCATTCCTTCATTTCCTTGTGTGGGGTTGAATTTGAACCTGTTTTGTGTGGCTGCTAAGTTTTTAACTTG TTTCAGGGTGATGGAGTTGGGAGGACTAGTGGTCATTCTCCTGAGGAAATTGATTCTGCTGCACCTGAGATTAGTGTCAG TACACCAGGTAGCTCAGAGAATTGGATGGTGTTGTCACTTGCAGGGGATAAGCCCACTCCTAGATCCTATGTATGTAATT CTGTGATTCTTTTTCATTTTATTTATTTGGTCATAGCTAGTTTTGTGGATGTGTTATGGCAAAATACTAAACTATAGTTC ATTGTGAATAGCATGCAGCAGCTGTTATTGAGAATAAGATGATAGTGGTTGGCGGCGAATCTGGGAGTGGATTGTTAGAT GATGTGCAGGTGAGAGAACGTTTCTAGTTTTGTAATTTAGAATTATATGGTTGGGAGATTGTTGTTTGTTGTTCTGTATT AACTAACTAATTATGATCTGGATATTATTCATTTTGTTTTCAGGTGCTTAATTTTGACACATTTTCATGGACCAAAGCAT CGTCTAAGCTTTACTTATCACCAAGTAGTCTGCCACTAAAGATTCCAGCTTGCAAGGGTCACAGTTTGGTACTTCAATCT ATCCATTTAGCAGTTTTTTTTGCACTTTTAGCAATAAATTCTCAGAAATGGGACACGACCAGTCAAGTTTTTTTTTGGGA TTGACATTAGTATTCTCATTATTTTTAGCACAACATTGTTGTATTGGTGCCTGAGATGGAGTTATGTTTTGATTATCTTT TTCATCGCAAACAGATTTTTTTTTGTCAAGGAGAGAAAGACATTTTTGATTGTGCTGATGTATAGTTTCTATCTACAGTT GTAAACATTCCATTATGATCTATTCCATTCTGTTCCCCTCTCCATTAGATATCCAAACATAGTTGTTAGTCTTTTTATCA TTGTATGCGTTCATAAAGTTAAGGCCTTGCATAACATAAGGTTCCGGAGAAAGTTGCAAGAATGAACCAGAAAAAAGAGA GGGGACATGATGAAAATTTATGCATGATATTGAAAATTTTCGACCTCCAACTTTGAACGTAAAGTTAATCAAAAGAATTC CAAGATATATGTGAGAAAGAATAACAAGAAAATGACACTGTTCTATCCTAAAAATCAGAGGAAAATTGGCCAGGAACACT GTTGAAAGTATGTGCTTGATAGGATTCACCAGGACTTTTCTGATGTGCTCTTATACTTGAGCTTACTTCAGTTTTGTTAT GCTTCCCCTGAACTGGATTCATATCAACTAATGGTCTTCTGTTTTAAGTTTACGCCTGATAGGATTTATACCAATCTAAA TTCATTTTGCTTGATGATACTTTGACCAGATTTCTTGGGGGAAAAAGGCACTTCTTGTTGGAGGGAAAACAGACCCGGGA AGTGACCAAATATCTGGTTCAGCCTCATGTCCTTTACATATGTAATAGCGTTGTCCTGATTCATGATGTGAAATTGTTCT AATAATCTTTTTGGTTTTTGTAGTATGGGCTTTTGATACAGAGACAGAATGCTGGTCACTCATGGAAGCAAAGGGAGACA TACCGGTAAGAATTTCATTTGATGAAAGTGCAAATACCTCTGTTTTAGGAAGTTGATCTTGAGGATTCTTTCTCTAGATT TTAGTCATTCAAATGTTAAGGCATGTGCTACTGGACTAAATTTTCATATGTTTCCCTATCATATTACTTAATATTCCCTT TGGTCCTCCTAACTTCCTATTTATAAGTCAGTTTCAACTTTCAACTAATTCACATGAATTACGAAAATTAGTTAAGATTA GTTATTAGACTCAAATTTATCTAAAAATATGTAAACTTTCCTACCCTTATTGAAAAGCTGAAAAAATTATTGACGAGTGT TAGATAGTGCTTCATAGGTATTTAATGATACATGAATCTAGAACATGACTTATAAATAGGAACAGAGGGAATAGATCGCA AATCATGAAGATTATTGAAAAATGTGTATTCTCTCTCTCTCTCTCTCTCTCTACCTTAATAATTCTCTATCAACTAAAAT ATGTTTAACAAGTTTGCAATAGATTTTTTGTTGTTGAGGATTGCCTAGTGGACGGAACAGTTTTTTTTGTTTGTTTTGAT TACATTGATATTTTCATGCATGAAGAGGATGTGATTATCACATCACATTTGAGCACCTATTTGTCAAGAAGACATGAGCT CAAACAATTCCAGACAAAGAACCAGGACTAAAATCGTAATTTAATTTCTTCCATCAATATCTCTCTAGGAAGTACTGACC AATGATTTTGTTCTTGGCAGGCTGCTCGCAGTGGTCACACTGTTGTTAGGGCTAACTCTAAATTAATATTGTTTGGGGGA GAAGATGCTAAAAGGAGGAAACTGAATGATCTACATATGTTTGATCTCAAGTCCTTGACATGGCTTCCACTTCACTGCAC GTAAGTGCCCATAGGCCTTGTTGTGATCATTTTCTTAAAAAATGGTTCAAAAACAAAAGTTTGGTATTCCATGTGAGTAT CTACGAGTAAGCACCTGGTATAAATGTTTCATTGCATTTGAATTATGTTAATTTGACGTTATGATACTCTTTCATTCTAC TACCTCCTAAAATATTATATTACTTACAGGGGAACAGCACCTTCTCCAAGATTCAATCACGTAGCAGCACTTTATGATGG TAAAATTCTTCTTATATTTGGTGGAGCTTCAAAATCCAGAACCTTGAACGACTTGTATTCACTTGACTTTGAAACGGTGT GTGAACTCTCTATACGGAAATAAGTGAAAGTTATTGATTTCCATTTTCCAAGATAAAGATAAAAAATTCATTCATTATAA ATTTGATGAATATATCTTTTCCCTCAGATGGCATGGTCAAGAATAAAGATACGGGGTTTCCATCCATCACCTAGAGCCGG TTGTTGTGGTGTTTTATGTGGCACTAAATGGTATATTACAGTGGGTGCAAGCAGGAAAAAACGTATGTTTTCTTATGAAG ATGCATTTGACAGTTATGTCAAGTTTACTTTTTGAACTTATCCTTTTACACTTCAAAGGGAAACCTAGTGCTATAAAGCT TCTACCATGATGAGGTCCAAGGGAGGGCCAGACCCAGTGTGGGTCTGTATGTAGGTAGCTTTACCTTCCATTTGTAAGAT GTTGGTTCCACGATTAGAACTTGTGACCTCCTAGTCACGCAGCAGCAACTCCAATCATTGCATCAAGCGCCCTTCATCCC ATGCATAAATATAACTGATTTTGTTTTTGGTTACTATGTCACATTGAAGTTATTCCTTGTATCTTTGTTTCCTGTCATAA TTTCATCTATTAAGAACTATTGCACGTTTGATCAATGTAGACTTTGAGAGCATTCCTTGTATTTTGAGTTTCAAAATTTT GGCAACTTTTAAAATTGGGCAAATCATTGAATCTATGTTCCTTGAGAATGGAGACCCAACACTTATTTTGAAAGATCAAA TTACTAGGAGATTGATTCCAACTAAAAGAGACAGAAGGATAAAGGATTGTATATGAATCAGCAAACAAGCATGAGATTTT AAAGTAGGTTTTAAGTTATCACTGGATTGGTACTGCATTGCTATTCTCTGCAACTTAGTTCCACTGCTTGTATCACTACT TGTCTGTTTCACTCTTGTTATATTCTTTATATTCTATTTCTTAAGTTTTAATTTTCCCCAACGTTTTGCAGGACATGGAG AGACTTTGATATATGATATTCTAAAAAGTGAATGGTCTGTGGCAGTTGCTTCGCCTCCGTCTTCTATCACTACCAACAAG GTGAACTTTTTATTTTCCCTGTCACATTACCTATCATTTATCTGCTGCTAGCCTCATGCTATTAATTTCACTGTTTATTC ATTAACAATGATGTATTAATGGTAACTTTCCTTAGTGCATTCCATTTAGCCTTTCGAACTTGTAACTCAAATTTTTGTGT CAAGGTAGTGGGAATAAGTACTACAAGTTTTTGTTACATACAAGACTTCATTTGGCCTGTTTAATACAACTGATAAAATT CCTGTCTCATTTTTTGAATATGAAATCTTGGTTCAACCTATAAGCTGTTAAGCTCAACCTATAAGCTGTTAATTTTCAAT TCATTGACCATGTATCTTCTTGATTATTAATAAAATTATTTCGATGCTTTACGTTTGGCTCTAGGAGTCCAACATATCCT TTCCCTCACTTTATACTAAATTTTATTTGATAGCAGATATTCTTAGTGTTCTTGGTCATGCTCTCCTCAAGATTGTTTGA AATCATTCTTATGATATCTGTTGTAGTAGCAGGGTTTTAGCCTGGTACACGTGCAGCACAAGGAAAAGGACTTTCTTGTT GCATTTGGGGGATCCAAAAAAGAGTCATCAAATCAGGTTTGGCTTAAATGTGTGAAGTTAATGTATTAGTTAGTTCTGAT CGAACTTGTGACCTTCATCTTCACTTCAACAGGTGGAAGTATTGATAATAGAAAAAAATGAATCAGCACTGAGAAGACGG CTAACTGCTACCGAAGTTCCTGGATCTATACTACATGACAAACATCCATCACCAAGTGGATTGGCCTCTCAACGTAAAAA TGGCTCTTCCCAACGTTTCATTGACCTTTTTTCTCAACACAATCTATCATCTGGAATTGGTCATGGTTCTGAAAGGAAGT CTCTTTCAGAATCCCTGCTTGTAGAAGATTCCAGCTCTCTCCCTACTAAAATCACCCTTGGCAGGCAATTTGATCATGAT GAAGAAATCAACGCACATATTAGGATTGACAAGCATTCAGAAGATGAAAGTTCTTTACCTCAGGTAAAACAGAAATTCCC TTTAATCATATGCTTTAATACAAAATGCTTCTTTGACACCGGGAAGCCGTGGATACTCTGCTAATGTAATTTTGATGCAT GTTGATTAACTACATATCCTAGAGGCTAGAACCCCCCCACCCGCACCAAGGTGGGTTTCAACATGCATAAATATACATAA GTTTATTCACCTCATCTGCTTGTTATTTTAACATTTAGAAGTCACAGGCTACAAGCTAATGGTCGTGATAAGCTGCTAAT GGTGCCATCTATCACCCCTTCTCATTAATTGAATGTACATCTAAAGTGAACCAATTATTATGGTGTTAAGAATTTCCTGT CTCGAAATATGTGTACTATTCCATTCCTGATACCAACATTTGTGACCAGAAAAAAAATAAACCTGATATTTTAACTTATT ATATGGTTCAGGCAGCAGATCATAGAACAAATCAAAATGGCTCTGGAAGTCAGAGGAACATGAGTGGAGCCAAGATCAAC ATGGAGGAGCAGGTGTTTGTAACCGGAAGTTCAAATCAACAAAATCTAGGTCTTGGAAATGTCATGCTAGAAAGTGAGGA TGTGTCATTCCCTGAAAACACTAAATCGGGATCGCACTCTGCTGCTTCAAACATATATCATTATTACGAAACTAAAGTGG CTTCCCTGATAAGAAAATTCGGCATTCTGGAGGGACAATTGGCAGCTGCGTTAGCAGGCCGAGAAGCTTCTGAGAAAAGC TTAGCATCAGCTTTTAAAAGCAGGCAGGAGGTGGAGAAAAAATTAGCTGACACGCTGAAGGAGGTAGAATTACTGAGAGA GAAGGTAGCTGGTTCAGAGTTGGCTCAAGAAGAAGCCAACAACCTATCCAACATTGTCCACTCTGACAATGTAAGGCTTG AGCATGATGTGGCATTCCTCAAGGCTGTTTTAGATGATACACAAAAGGTATGTTTGGCACTTCATTTGATGGAAGTACTT GCATTCCTGTATAAAAGCCAATATTGAGTTGTCAATCTTAGTAGGAATTGCACTCAACAAGAGGAGTTCTTGCTGGAGAA AGAGCCAGGGCATTCCAATTACAGGTACCTTCATTCTTGGATTAATTACAAATCGTAGCCGTCTTTTATTCACATTTTAT TAGTCCAATTATGTTGTTGAAATTGAGGAGTTCAGTATGTTACCATATTTGAATTTCTTAACCACATTGCCATCATTTTT GAGTGCACAGGTTGAAGTATTTCATCTCAAACAGAGGCTGCAATCAATGGAAAATCGAGCACCAACTCCGAGGAAGCCTT TTCATGTATGATGAATGAATGAAGGTGTTCTGAATGGTGAATGGATGATACCAATCAAATTCAGCAAAAATGATGATAGG GACAAAGCTCACTCCTTTCCTAGAATGAGGACAAAGTGAATGCATAAGACAAGACACGGGCATTTTGAGTTGAAGACTTG GACAATGCTTGGTTCTCAAAATGAAAGTACGAGACAAAATTGGATCCGCACTACATTGTTTGATCAAGTGCACCATCTTC CACGGTCGTAATAGAAGATTGTGAAACATAAAGAAAGTGGAGATATTATTAGTTTATAGTTCATTGATCTCAATCTAGTT GAATTGTGATCAATTTAATAACAATTATATATACATTTTGTAATATTATATAATATATAATTAATACCTCTAACTTGTGC AATGAGGTGTCCGTGAATTAGAGAGTTACAAGAACTTATTTTTTAAAATAAAAATATAAGATTCAG
CDS sequence (LotjaGi6g1v0307000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGGTTTCTCTCGTAGGCACATGAAACTTGGCAGATTGAAGGTTCAGCTTTCTGACAATACCCAGGGAACTAGAAG TCCTGTGAGGCACCACAAGAGAAATGGAAACTCCAATGGTGATGGAGTTGGGAGGACTAGTGGTCATTCTCCTGAGGAAA TTGATTCTGCTGCACCTGAGATTAGTGTCAGTACACCAGGTAGCTCAGAGAATTGGATGGTGTTGTCACTTGCAGGGGAT AAGCCCACTCCTAGATCCTATCATGCAGCAGCTGTTATTGAGAATAAGATGATAGTGGTTGGCGGCGAATCTGGGAGTGG ATTGTTAGATGATGTGCAGGTGCTTAATTTTGACACATTTTCATGGACCAAAGCATCGTCTAAGCTTTACTTATCACCAA GTAGTCTGCCACTAAAGATTCCAGCTTGCAAGGGTCACAGTTTGATTTCTTGGGGGAAAAAGGCACTTCTTGTTGGAGGG AAAACAGACCCGGGAAGTGACCAAATATCTGTATGGGCTTTTGATACAGAGACAGAATGCTGGTCACTCATGGAAGCAAA GGGAGACATACCGGCTGCTCGCAGTGGTCACACTGTTGTTAGGGCTAACTCTAAATTAATATTGTTTGGGGGAGAAGATG CTAAAAGGAGGAAACTGAATGATCTACATATGTTTGATCTCAAGTCCTTGACATGGCTTCCACTTCACTGCACGGGAACA GCACCTTCTCCAAGATTCAATCACGTAGCAGCACTTTATGATGGTAAAATTCTTCTTATATTTGGTGGAGCTTCAAAATC CAGAACCTTGAACGACTTGTATTCACTTGACTTTGAAACGATGGCATGGTCAAGAATAAAGATACGGGGTTTCCATCCAT CACCTAGAGCCGGTTGTTGTGGTGTTTTATGTGGCACTAAATGGTATATTACAGTGGGTGCAAGCAGGAAAAAACGACAT GGAGAGACTTTGATATATGATATTCTAAAAAGTGAATGGTCTGTGGCAGTTGCTTCGCCTCCGTCTTCTATCACTACCAA CAAGGGTTTTAGCCTGGTACACGTGCAGCACAAGGAAAAGGACTTTCTTGTTGCATTTGGGGGATCCAAAAAAGAGTCAT CAAATCAGGTGGAAGTATTGATAATAGAAAAAAATGAATCAGCACTGAGAAGACGGCTAACTGCTACCGAAGTTCCTGGA TCTATACTACATGACAAACATCCATCACCAAGTGGATTGGCCTCTCAACGTAAAAATGGCTCTTCCCAACGTTTCATTGA CCTTTTTTCTCAACACAATCTATCATCTGGAATTGGTCATGGTTCTGAAAGGAAGTCTCTTTCAGAATCCCTGCTTGTAG AAGATTCCAGCTCTCTCCCTACTAAAATCACCCTTGGCAGGCAATTTGATCATGATGAAGAAATCAACGCACATATTAGG ATTGACAAGCATTCAGAAGATGAAAGTTCTTTACCTCAGGCAGCAGATCATAGAACAAATCAAAATGGCTCTGGAAGTCA GAGGAACATGAGTGGAGCCAAGATCAACATGGAGGAGCAGGTGTTTGTAACCGGAAGTTCAAATCAACAAAATCTAGGTC TTGGAAATGTCATGCTAGAAAGTGAGGATGTGTCATTCCCTGAAAACACTAAATCGGGATCGCACTCTGCTGCTTCAAAC ATATATCATTATTACGAAACTAAAGTGGCTTCCCTGATAAGAAAATTCGGCATTCTGGAGGGACAATTGGCAGCTGCGTT AGCAGGCCGAGAAGCTTCTGAGAAAAGCTTAGCATCAGCTTTTAAAAGCAGGCAGGAGGTGGAGAAAAAATTAGCTGACA CGCTGAAGGAGGTAGAATTACTGAGAGAGAAGGTAGCTGGTTCAGAGTTGGCTCAAGAAGAAGCCAACAACCTATCCAAC ATTGTCCACTCTGACAATGTAAGGCTTGAGCATGATGTGGCATTCCTCAAGGCTGTTTTAGATGATACACAAAAGGAATT GCACTCAACAAGAGGAGTTCTTGCTGGAGAAAGAGCCAGGGCATTCCAATTACAGGTTGAAGTATTTCATCTCAAACAGA GGCTGCAATCAATGGAAAATCGAGCACCAACTCCGAGGAAGCCTTTTCATGTATGA
Protein sequence (LotjaGi6g1v0307000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFGFSRRHMKLGRLKVQLSDNTQGTRSPVRHHKRNGNSNGDGVGRTSGHSPEEIDSAAPEISVSTPGSSENWMVLSLAGD KPTPRSYHAAAVIENKMIVVGGESGSGLLDDVQVLNFDTFSWTKASSKLYLSPSSLPLKIPACKGHSLISWGKKALLVGG KTDPGSDQISVWAFDTETECWSLMEAKGDIPAARSGHTVVRANSKLILFGGEDAKRRKLNDLHMFDLKSLTWLPLHCTGT APSPRFNHVAALYDGKILLIFGGASKSRTLNDLYSLDFETMAWSRIKIRGFHPSPRAGCCGVLCGTKWYITVGASRKKRH GETLIYDILKSEWSVAVASPPSSITTNKGFSLVHVQHKEKDFLVAFGGSKKESSNQVEVLIIEKNESALRRRLTATEVPG SILHDKHPSPSGLASQRKNGSSQRFIDLFSQHNLSSGIGHGSERKSLSESLLVEDSSSLPTKITLGRQFDHDEEINAHIR IDKHSEDESSLPQAADHRTNQNGSGSQRNMSGAKINMEEQVFVTGSSNQQNLGLGNVMLESEDVSFPENTKSGSHSAASN IYHYYETKVASLIRKFGILEGQLAAALAGREASEKSLASAFKSRQEVEKKLADTLKEVELLREKVAGSELAQEEANNLSN IVHSDNVRLEHDVAFLKAVLDDTQKELHSTRGVLAGERARAFQLQVEVFHLKQRLQSMENRAPTPRKPFHV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 711 | 711 | 0.0 | – | |
| PANTHER | 1 | 711 | 711 | 0.0 | – | |
| MobiDBLite | 13 | 67 | 55 | - | – | |
| Gene3D | 68 | 132 | 65 | 3.7E-10 | ||
| SUPERFAMILY | 73 | 161 | 89 | 4.45E-14 | ||
| Pfam | 84 | 127 | 44 | 1.7E-8 | ||
| Gene3D | 133 | 346 | 214 | 3.4E-33 | ||
| SUPERFAMILY | 135 | 382 | 248 | 4.45E-43 | ||
| Pfam | 193 | 243 | 51 | 2.7E-7 | – | |
| Pfam | 244 | 292 | 49 | 3.9E-6 | – | |
| MobiDBLite | 399 | 420 | 22 | - | – | |
| MobiDBLite | 483 | 510 | 28 | - | – | |
| MobiDBLite | 494 | 510 | 17 | - | – | |
| Coils | 604 | 624 | 21 | - | – | |
| Coils | 646 | 666 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0307000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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