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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0313500 |
| Transcript ID | LotjaGi6g1v0313500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|G7IP30|G7IP30_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi6g1v0313500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63155932..63159445) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCACTTCCAACGGTTCCGGCGACGGAAACCACCGCGCAACCCCACCGTCCGAATCGGCGTTGATCTTTCTCGGAAC AGGCTGTTCCAGCATGGTTCCCAACGTAATGTGCCTCATCCAGCCCTCCAATCCTCCCTGCTCCGTCTGCGTTCAGTCAC TGACTCTCCCTCCCGATCGGAACCCTAATTACAGGTAACCTCACCGGAACCAATGGCTTCACGATCACTGTTTGAATATC GATCCTAACTAGTTTTCGTTTTTTGATGGCTTTGCAGGTGTAATACATCTCTTCTAATTGATTATCGTGAAAGCAATGGT GATCACAACTACATATTGATTGATGTTGGGAAGACATTCAGAGAGGGTGTGCTTAGATGGTTTACTTTACATCAGATTCC AAGAATTGATTCTGTGAGTTAATCCTGTAACTTTTTTCTAGCTATGCTTTTGCAGATCCAACCTTATGTAGTTATGTTGT ATGTGTGAAAGTAGTAAATTCAATGTAATGTGACTTTCATTATCTTAAGATAATAGCTTAGAAGCTTGCAAATGAAAATT GAAATCCATTGTCTTTGCTGTTAAATCCTATTAGCTTCTTTTTATTCCTTCTATTTGCAATTTGTATACCTGAAATTTGC ATTCTCTGAGAAAATAAGTACTACTTCTGGCTTGAATTGCAGATTATTTTAACTCACGAGCATGCGGATGCAGTCCTTGG ATTGGATGATATACGTGCTGTGCAGCCTTTTAGTCCAACAAATGATATTGAACCTACTCCCATATACCTGAGTCAGCATT CAATGGATAGGTAGCTCTACTAACAGTTGCTTGTTATTTAAGAACCTACATAAGCATATTTCAAGATTATAAGACAGTGC AAAGTGACCCTAATTATGAAATAACAACAGAATTAGAAAGAGCCATCGATCATTCCTTGCTAAAATGCAAAATCAATTAT TCAAATACTGTAAACAATGAAGACTTAATTAAAGAGTTTTGCCTTTAGTGGATAAATTGGCTTAGAGAACACCCCAAATG GGAGCTTAGCTACCAAGTACCATTAGTATTATATCATTAGTTATACTTTGCAATTTGCATTACTTAAACTAGAAGTTCTG GCATAGCACTTGGGCACTAGATAAACTTTTAGTTCTTTAAGAAGATATAGATAAACACTACTTTTCATTACAATTCCTTT TAAAACTTTTCTTGTTGCATGTATTTTCTGTTAGAAGTTACTCTATTGAACAATGTGGCTCTTTAATTTTCAATATTGAT GATGTGATTCTTGTTGTTCTCACAGGGTAATTACATGCAACAATTCAATTCAATTCATACCTAAAAAATTAGTCTTTCTG AAAGTATTTAAATGTCTCAGTATTTGTAACTGTGAATGTTTTAGATGAAACCAGTGAATGTGCGTGTGCACTTTCCAACC ATTGTTTTGAATGTTTGGTAAATTGTTTTGATTATAATGTGACTCCTATTTCAGCATTATGCCCTTTTCATTTGATTTTA TGGTTGGTTTATGCTCTCCAATAGTTGATTCCATGTTTTAAATCTTTTCAACAGCATAGCAGAGAAGTTTCCTTATTTGG TTCAGAAAAAACTCAAGGAAGGGCAAGAAGTACGAAGGGTGGCTCAGATGTCCTGGAACATTATTGCTGATGACTGCAAT CAACCATTTTCTGCATCAGGATTAAAGTTCACTCCTTTACCAGTTAATTGCTACTATCTTTGACCTTGTGTTCTGACTGC AATACTCCTTCTAAGATATAAGACCTTTACTGTTTTGTTTGTGGATGTAGGTTATGCATGGAGAGGATTACATCTGTTTG GGCTTTCTTTTTGGTGAGAAAAGTAGGGTGGCTTATATATCTGATGTTTCACGGATTCCTGCTAGTACAGAGTATGGTAT GTTTTGAATTTGTTTCTTCCTGTTGGATATGTGCATTTCTTCATCAGTTCTTTCTCACAAAGTTTGACTATAAGAATGCT AAGAGATTGTTGATCTACCTGTTTTATCATATGTTGTAACTCTCTTATCTCTTGACTGGAAAAAAGAATGGCATATTGGC CATGGATTGCAAATTGCAATCAATAAGGGGTTTGGTGTACACTGTTATTATTGCTGTAATTTTGGCCAGACCCTTTCCTT TTTAAATTGCAAAAACATTCCCAATTCTAGAAAATAACTGTTAATTTTTTAGGCATTTATACATAATAAGAAAACCCTCA GCTGTGTAATGATTTTTTGACATCTAACATCTAGCAATAAATTTTCTTTTGACAGTCATTTCCAAAAGTGGAGCTGGACA GTTGGATCTTCTAATATTGGACTCATTGTATAGGGTCAGTTGTTCCATTTTCAATTTTTTTTGGATATAAAATAGTCATA GAAATATGATGTAAATGTTGCATTCTGACACTTTTGTAATTATTAGTGAAATGGGAAATGAAAACACAAAATGTTTTCTC AAACCAAATAGGCTCTTAATGTCTCTTTACGGGAGTAAATATTTTTCGACCGTAATTTGTTTTTCTAATACAAGATAGAC GTCACTTCTTTGTTACTAGTTTAATGACGTTACCAAAGAAGGCCAATAACAGGTCACTCAGTGCATATGTGCTGGACCTA AATGCTTTAAATATTTCAGGAACTTGAGCCTATCTTCAACTTTATAATTATAGGAGATGTTTCCTTTCTTTGCTTTTTTT TTAATTAACAAAAATATTGTGCAATATTGATAATTAAGTGAGAATTTTATCATACATGTTGTCAATTCTATGTTTTAGTT TTCTTGTTCCTTTACTTTCTCTTTGATAAAGGTTCTAATCGAATTGGGTTGGAAAAAAGAAAGAAAAATGTTTCTGTATC GATGGAATACAATATTGTAGACGAAATTAAAAGTGTTGGGCTGCCCCTCCCAATTTGCACCCTAAAACCAAAGACAACCT TTTCTAACTCTCTAACTGACTATTACAACTAACAAACTAATCAGGTTTGGTTAACTAACAATTTCCTTCTTTGCTCTTTG TGTTATCACAGACTGGATCACATAATGTTCACCTATGTTTTCCACAGGTTTGTTTTCCTTTTTACAAAATGATTTTTGTA CTTCATATCTCCCTGATGGTGAAATATTATAGTTAATTGGTCATTTCAGACTCTTGAAACTGTGAAGAGGTTGTGTCCAA AGCAAACCCTATTAATTGGAATGACTCATGAGTTTGATCATCACAAGGACAACGAATTTTTGAAAGAGTGGTCCAGAAGG TATATGTCTTATTCATTTGTAAAGAAGTTAAATCTGAATTTTTGCAAATACATTTTGTAATGATTAACCTGGTAAAATCT GATTGTGACAGATCATGCAATGTAAAATTTATTTTTGTACTCTATCTTAGTTGTGGATTTTAGAAAATGATTTGAATCTT CTGTTGTTGTGCGTAGGGAAGGAATTCAAGTGCAGCTTGCTCATGACGGTTTGAGAGTTCCCATAGACTTATAG
CDS sequence (LotjaGi6g1v0313500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAGCATAGCAGAGAAGTTTCCTTATTTGGTTCAGAAAAAACTCAAGGAAGGGCAAGAAGTACGAAGGGTGGCTCA GATGTCCTGGAACATTATTGCTGATGACTGCAATCAACCATTTTCTGCATCAGGATTAAAGTTCACTCCTTTACCAGTTA TGCATGGAGAGGATTACATCTGTTTGGGCTTTCTTTTTGGTGAGAAAAGTAGGGTGGCTTATATATCTGATGTTTCACGG ATTCCTGCTAGTACAGAGTATGTCATTTCCAAAAGTGGAGCTGGACAGTTGGATCTTCTAATATTGGACTCATTGTATAG GACTGGATCACATAATGTTCACCTATGTTTTCCACAGACTCTTGAAACTGTGAAGAGGTTGTGTCCAAAGCAAACCCTAT TAATTGGAATGACTCATGAGTTTGATCATCACAAGGACAACGAATTTTTGAAAGAGTGGTCCAGAAGGGAAGGAATTCAA GTGCAGCTTGCTCATGACGGTTTGAGAGTTCCCATAGACTTATAG
Protein sequence (LotjaGi6g1v0313500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSIAEKFPYLVQKKLKEGQEVRRVAQMSWNIIADDCNQPFSASGLKFTPLPVMHGEDYICLGFLFGEKSRVAYISDVSR IPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLETVKRLCPKQTLLIGMTHEFDHHKDNEFLKEWSRREGIQ VQLAHDGLRVPIDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 174 | 174 | 1.6E-82 | – | |
| PANTHER | 1 | 174 | 174 | 1.6E-82 | – | |
| Gene3D | 1 | 173 | 173 | 2.0E-31 | ||
| Pfam | 21 | 135 | 115 | 1.6E-10 | ||
| SUPERFAMILY | 30 | 172 | 143 | 1.84E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0313500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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