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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0315500 |
| Transcript ID | LotjaGi6g1v0315500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase; TAIR: AT1G29670.2 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670; TrEMBL-Plants: tr|I3SXR2|I3SXR2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0315500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63342017..63344387) extracted from Lotus japonicus Gifu genome v1.2.
AATAGATGCTCTCATTAAATATGTCGAAGTTTGCGATCCTTAATTAATGCTGACAAACTATAGTGGTAATTATATTTTTT ATTGCCAAACTTGTGATCAAGATCACTTCATTTTCACAATTTATTTTTGGCCTTGTCCCCCTCGACCACCCTATAAATAC ATGCATCCTCCTCGCTTATTGTCACTCACTTACTCATACACTTAGCTTGTTCTTGTTGTATCTATTGTGAGAGAGAAATG GCTTTTGAGAGTAAATCATGGTTGGTTCTCTCTCTTGCTGTTCTCATGGTTGCAAGTTGCATGCAACAAAGTGTCCTTGG GGCTTCCCAAGTTCCTTGCCTTTTTGTGTTTGGGAACTCTCTCTCTGATAGTGGAAACAACAACAACCTTAATACATCTG CAAAAGCTAATTTCTTGCCATATGGTATTGACTTCCCAACCGGCCCAACAGGCAGATATAGCAACGGATTAAATCCCATT GACAAATTAGGTAATTAACATTCATGTCACTTCTTATCTTTATTATTATTTTTCACAATATCCAAACTCTATATATATAA CATTAATTTACCATTAACAATGTTGCAGCCCAAATTTTGGGATTTGAGCATTTCGTTCCGCCGTTTGCAAACCTTACTGG CTCAGACATACTTAAAGGTGTTGATTATGCATCCGGTTCAGCTGGAATTCGCAAGGAGAGCGGCAAACAATTGGTACACA TTGTTTGGGCATGTCAATTATATATATATATATATATATATATATATATATATATATATACCCGTTAATAATCTATTATT TGTGTATGTATGTTCAATTAGCTTTTTCGTATTGCGAGGAATATTTGTGTTTCATGCAAGCCGCTAAATTTATGCAGGGT CAGAATATTGACGTTGGATTACAATTAACTCATCACAGACTCATAGTTTCTAAAATTGCCCACAAACTTGGAAGTTTAGA CAACGCTGTGAACTACCTTAAGAAGTGCTTGTATTACGTGAATATAGGCACCAATGATTATGAACAAAATTACTTCCTTC CCGATATATTCAATACAAGCCACATTTATACCCCTCAGCAGTATTCTAAAGTTCTTATTCACCAGCTAAATCACTATCTA CAGGTATATATATATAAATTTGACATCATCATGAAAGGCATATATATGTGATTTCTTGATATATAATATTTACAAATATT TATTATATATAATGTTGAAAAAGTAATTGTTTACGCTCGATCCATGACAGACTCTGCATCATTTTGGGGCAAGAAAGACC ATTATGGTTGGAATGGATCGCTTAGGTTGCATTCCAAAGGCTCGTCTGACAAATAATGGATCTTGCATTGAAAAGGAGAA TGTTGCCGCATTCCTTTTCAATGATCAGCTTAAAGCTCTTGTGGATCGTTACAACCACAAAATCTTACCTGATTCCAAAT TCATCTTCATCAATAGCACAGCCATAATCCATGACCAATCACACGGTACAAATTAATTAAGTACTTTCTAATTAATACTT CGATTCATGATCACATTCACTTGAATTGAATGCGCCTAATTAACTTTGATCAATTTCAGGTTTCACGATTACTGATGCTG CTTGTTGCCAATTAAACACTACAAGAGGAGTTTGTCTTCCTAATCTAACACCATGCCAAAATAGGAGTCAGTATAAGTTC TGGGATGGAATTCACACAACCGAAGCTGCAAACATACTCACTGCAACAGTTTCATATAGTACTTCGGACCCAAACATCGC TCACCCAATGAATATCCAAAAACTTCTTTCATCAAACTCCATAAATTAATTAGTTCAGGGTGTTCTTAAATAAGTAGTTC AAATAATTCAGTATGCATGCATGGTCATTCTCATATTCCAATCAGAATAAGTTCAAGGTCTTTGGTGCTTGTTCCTTTGT TTGTGTGTTCCTAGTCGGTACCTTCTTTCAATAAATGGATGAGGATTTGCTTGGTTCAATCATTTCCTGGATATTTAAGT TTTGGGGGGCTTCATTTATATAGCTTTAGGGCTAGCTATTTTTGATGTATTTGATACCAGGATTTTGTTGAGCACCTCGT CTTGATTTTGGATCTTCGGCATTAGTATGTAAGGGGTTTTCTGTTCCTCCACTCACTTGAGAGAGTTATGTTCTCATGCA AATTTGATCTTTATAATAAATTGATTTTTGTTTCCAAAACATATGATCATCATATACCAACTAAAAGGACATCTTTGTCA TTATACTATTTATTAAAGATGAATTACGGCACACACATATCAAATGTAATGGACTCGTTCTCCTTCCATATGAATTAACT TGCTTAATTGCTTTGAGCTATTAAGAATGGTCTAATAAGAATTAAGTTTGG
CDS sequence (LotjaGi6g1v0315500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTGAGAGTAAATCATGGTTGGTTCTCTCTCTTGCTGTTCTCATGGTTGCAAGTTGCATGCAACAAAGTGTCCT TGGGGCTTCCCAAGTTCCTTGCCTTTTTGTGTTTGGGAACTCTCTCTCTGATAGTGGAAACAACAACAACCTTAATACAT CTGCAAAAGCTAATTTCTTGCCATATGGTATTGACTTCCCAACCGGCCCAACAGGCAGATATAGCAACGGATTAAATCCC ATTGACAAATTAGCCCAAATTTTGGGATTTGAGCATTTCGTTCCGCCGTTTGCAAACCTTACTGGCTCAGACATACTTAA AGGTGTTGATTATGCATCCGGTTCAGCTGGAATTCGCAAGGAGAGCGGCAAACAATTGGGTCAGAATATTGACGTTGGAT TACAATTAACTCATCACAGACTCATAGTTTCTAAAATTGCCCACAAACTTGGAAGTTTAGACAACGCTGTGAACTACCTT AAGAAGTGCTTGTATTACGTGAATATAGGCACCAATGATTATGAACAAAATTACTTCCTTCCCGATATATTCAATACAAG CCACATTTATACCCCTCAGCAGTATTCTAAAGTTCTTATTCACCAGCTAAATCACTATCTACAGACTCTGCATCATTTTG GGGCAAGAAAGACCATTATGGTTGGAATGGATCGCTTAGGTTGCATTCCAAAGGCTCGTCTGACAAATAATGGATCTTGC ATTGAAAAGGAGAATGTTGCCGCATTCCTTTTCAATGATCAGCTTAAAGCTCTTGTGGATCGTTACAACCACAAAATCTT ACCTGATTCCAAATTCATCTTCATCAATAGCACAGCCATAATCCATGACCAATCACACGGTTTCACGATTACTGATGCTG CTTGTTGCCAATTAAACACTACAAGAGGAGTTTGTCTTCCTAATCTAACACCATGCCAAAATAGGAGTCAGTATAAGTTC TGGGATGGAATTCACACAACCGAAGCTGCAAACATACTCACTGCAACAGTTTCATATAGTACTTCGGACCCAAACATCGC TCACCCAATGAATATCCAAAAACTTCTTTCATCAAACTCCATAAATTAA
Protein sequence (LotjaGi6g1v0315500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFESKSWLVLSLAVLMVASCMQQSVLGASQVPCLFVFGNSLSDSGNNNNLNTSAKANFLPYGIDFPTGPTGRYSNGLNP IDKLAQILGFEHFVPPFANLTGSDILKGVDYASGSAGIRKESGKQLGQNIDVGLQLTHHRLIVSKIAHKLGSLDNAVNYL KKCLYYVNIGTNDYEQNYFLPDIFNTSHIYTPQQYSKVLIHQLNHYLQTLHHFGARKTIMVGMDRLGCIPKARLTNNGSC IEKENVAAFLFNDQLKALVDRYNHKILPDSKFIFINSTAIIHDQSHGFTITDAACCQLNTTRGVCLPNLTPCQNRSQYKF WDGIHTTEAANILTATVSYSTSDPNIAHPMNIQKLLSSNSIN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| ProSiteProfiles | 1 | 21 | 21 | 5.0 | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| PANTHER | 4 | 357 | 354 | 4.7E-152 | – | |
| PANTHER | 4 | 357 | 354 | 4.7E-152 | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 28 | 9 | - | – | |
| Gene3D | 22 | 345 | 324 | 2.5E-31 | ||
| Phobius | 29 | 362 | 334 | - | – | |
| CDD | 33 | 335 | 303 | 3.73602E-101 | ||
| Pfam | 35 | 332 | 298 | 1.0E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi6g1v0315500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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