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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0315600 |
| Transcript ID | LotjaGi6g1v0315600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase; TAIR: AT1G29670.2 GDSL-like Lipase/Acylhydrolase superfamily protein; Swiss-Prot: sp|Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670; TrEMBL-Plants: tr|A0A072V4S6|A0A072V4S6_MEDTR GDSL-like lipase/acylhydrolase; Found in the gene: LotjaGi6g1v0315600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63349031..63351505) extracted from Lotus japonicus Gifu genome v1.2.
GCTTTGTGGACTTTTTTTTTTACATCCGAAAAATAAATCACATCATCTAAGGATTGAACACTGGACATCTCCCTCCCCAA TTTATATGTCACCAACTCTACCAATTGAGCTATCATTCGGGGACATGAAGTTTATACTTTCATTTGAAGTACTAATCAAT AAAACAGTCCTTTTTTTTTTCTTGCTGTTCATTGACCTACAAATTAAATGATTGCCAACAAAATTGGTAACAGTCCCTTT TCTTGCTCCAGTTAAGTGGGGTGAGGATAAGTTGTGTCCCTTCAGCAGAACAGAGATGGTTCTTTGAAATTGAGTGCTTA GGTCCTGCTTCATTAGTTTCTCTGCATAGAGATGGGTTTTGAGAGCAAGTCATGGTTGGTCTTGCCTCTTCTTTTCTTGC TTGCAAGCTGTTGGCAAAAATGTGTCAATGGAGAATCACAAGTTCCTTGCCTTTTTATATTTGGGGACTCTTTGTCTGAT AGTGGAAACAACAATGACCTTCCAACCACTGCAAAATCTAACTACAATCCATATGGGATCGACTTCCCAACTGGCCCAAC CGGAAGATTCACCAATTGCCGGACCACAATTGATATAATTAGTAACGCTTCCTTAAACTCTAATCTCTATTTTTTCTCTT AAAACTGTATTTAACTATCCAAACTGTATAGAATAGATTGGCAATAAGTACTTTATTTATTTCTCACTAAGAATTTTGGG GGTCAAATAACTCAGGAATTTATTTACAGTAACACTTTTTTCTAGCTCAGTCTAAAGTTGTATCATTGCAGCTCAATTTC TGGGATTTGAGGATTTCATCCCTCCCTTTGCAAACACTAGTGGTTCGGACATACTTAAAGGTGTGAACTATGCATCTGGG TCAGCTGGAATTCGTAATGAGAGTGGCACGCTTTCGGTATGAATCGAACAGCCTTTTTCTTTCTTTACCTGTCGCATGTT TGGAAACACGTTGCACTTTCATGTTTAAGTAAGAATCAATTTTGAGTAAAGAAGTCTGAAAAAGCTACTCACAGTAGCTT CTGTGGAGTGAATTAAACGCATATATATCCAAACATGCTATTGTTCATCTAAATCTTTAATTGCTTTTTTGGTAGGTGGC TAGAAGATTTGTGTTACAATGTCCATACATATCACTAAGCTAGCTCTATGAAATGCAGGGTGCTTGCATCAGCTTGGGAT CACAGTTAGCAAATCACAGAGTCATAGTTTCCCAAATTGCCAAAAAACTTGGAAATCGTGAAAAAGCTCAACAATACCTT AACAGGTGCTTGTATTACGTGAACATAGGCAACAATGATTACTTAAACAATTACTTCCTTCCCCAATTTTACCCAACAAG CAGCATTTATAGTCCTGAGCAGTATGCAGAAGCTCTGATTGAAGAGTTATCTGTGAATTTACTGGTATCCATTAAAAACT TCTCTGCATTTCACTTTTCTCACATGATTAGGATAATATGTTACCCCATTTATGATATGAAGGTTCAATTAACAGGGCAA GTTGATTTTTTGTGGGCAGGATCTACATGACATTGGAGCAAGGAAATATGTGTTGGTTGGGCTGGGCCTTATAGGCTGCA CTCCATATGGAATCTATACAACCGGAAACGGGTCTTGCGCTGAAGAGGAGAATGCTGCTGCATTCATTTTCAATGACAAG CTTAAATCTCTTGTGGAACTTTTCAATAACAAGTTATCTGCTACTTCCAAGTTCATCTTCATAAACACTACATCCATTGA CCAAGAGAATACACTTGGTAATAGTTTTGGTTTCTTAATTATATACTCCACTTCAATTCACATCTCTACCTTGAAAACAA TTGGTTGTCATAATACATATAATCATGGCATGCATGATCTCAGTCTCAGGTATTTCGGTGACTGATGCTGCTTGCTGTAG CCCGGGGTTGCTTGGAGAGTGTATTCCTGATGAAATACCATGCTATAATAGGAGTGATTATGTGTTTTGGGATGAATTTC ATACCACAGAGGCTTGGAACCTACTCACCGCCATAAAGTCTTATGATACTTCTTCTAATCAAGCCTTCACCTACCCATTG GATATCAAGCACCTTGTTCTTGAGCAAGATCTTAAGATGGAATTGAAGTTCATAAATGGGATCACATCACAGCTCAGTGG CCCTACATAATTATGTTCATGTTATCGTGTTGATCATTCATGTAAAGCTGAATAGTTTATTCATTGAATAAGTTGAGTAA TAAGATGCTACTAGGGGTGGAAATAAGCTAGGCTTTGGTTAAATAAGATTGACCTACTTAAAAAAATTCAATTTGCTGGG CATGGTTCATGTAACTTTCTTTTAGACTTGAGCCTGATCTTTTTGAAAGTCTGATCTACCTTGGTAGCCTATTTAAACAT ATAATTAAGTCAATCAGTGTATGATTTTAAGTTGTTATAAAAATTGTAATGGAATTTTTTTTTGATAAGCATGGA
CDS sequence (LotjaGi6g1v0315600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTTGAGAGCAAGTCATGGTTGGTCTTGCCTCTTCTTTTCTTGCTTGCAAGCTGTTGGCAAAAATGTGTCAATGG AGAATCACAAGTTCCTTGCCTTTTTATATTTGGGGACTCTTTGTCTGATAGTGGAAACAACAATGACCTTCCAACCACTG CAAAATCTAACTACAATCCATATGGGATCGACTTCCCAACTGGCCCAACCGGAAGATTCACCAATTGCCGGACCACAATT GATATAATTACTCAATTTCTGGGATTTGAGGATTTCATCCCTCCCTTTGCAAACACTAGTGGTTCGGACATACTTAAAGG TGTGAACTATGCATCTGGGTCAGCTGGAATTCGTAATGAGAGTGGCACGCTTTCGGGTGCTTGCATCAGCTTGGGATCAC AGTTAGCAAATCACAGAGTCATAGTTTCCCAAATTGCCAAAAAACTTGGAAATCGTGAAAAAGCTCAACAATACCTTAAC AGGTGCTTGTATTACGTGAACATAGGCAACAATGATTACTTAAACAATTACTTCCTTCCCCAATTTTACCCAACAAGCAG CATTTATAGTCCTGAGCAGTATGCAGAAGCTCTGATTGAAGAGTTATCTGTGAATTTACTGGATCTACATGACATTGGAG CAAGGAAATATGTGTTGGTTGGGCTGGGCCTTATAGGCTGCACTCCATATGGAATCTATACAACCGGAAACGGGTCTTGC GCTGAAGAGGAGAATGCTGCTGCATTCATTTTCAATGACAAGCTTAAATCTCTTGTGGAACTTTTCAATAACAAGTTATC TGCTACTTCCAAGTTCATCTTCATAAACACTACATCCATTGACCAAGAGAATACACTTGTCTCAGGTATTTCGGTGACTG ATGCTGCTTGCTGTAGCCCGGGGTTGCTTGGAGAGTGTATTCCTGATGAAATACCATGCTATAATAGGAGTGATTATGTG TTTTGGGATGAATTTCATACCACAGAGGCTTGGAACCTACTCACCGCCATAAAGTCTTATGATACTTCTTCTAATCAAGC CTTCACCTACCCATTGGATATCAAGCACCTTGTTCTTGAGCAAGATCTTAAGATGGAATTGAAGTTCATAAATGGGATCA CATCACAGCTCAGTGGCCCTACATAA
Protein sequence (LotjaGi6g1v0315600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFESKSWLVLPLLFLLASCWQKCVNGESQVPCLFIFGDSLSDSGNNNDLPTTAKSNYNPYGIDFPTGPTGRFTNCRTTI DIITQFLGFEDFIPPFANTSGSDILKGVNYASGSAGIRNESGTLSGACISLGSQLANHRVIVSQIAKKLGNREKAQQYLN RCLYYVNIGNNDYLNNYFLPQFYPTSSIYSPEQYAEALIEELSVNLLDLHDIGARKYVLVGLGLIGCTPYGIYTTGNGSC AEEENAAAFIFNDKLKSLVELFNNKLSATSKFIFINTTSIDQENTLVSGISVTDAACCSPGLLGECIPDEIPCYNRSDYV FWDEFHTTEAWNLLTAIKSYDTSSNQAFTYPLDIKHLVLEQDLKMELKFINGITSQLSGPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 20 | 20 | 5.0 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 3 | 361 | 359 | 4.7E-183 | – | |
| PANTHER | 3 | 361 | 359 | 4.7E-183 | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 20 | 344 | 325 | 5.5E-33 | ||
| Phobius | 23 | 381 | 359 | - | – | |
| CDD | 32 | 341 | 310 | 5.42672E-104 | ||
| Pfam | 34 | 330 | 297 | 1.4E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi6g1v0315600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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