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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0316200 |
| Transcript ID | LotjaGi6g1v0316200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.2; TAIR: AT1G69850.1 nitrate transporter 1:2; Swiss-Prot: sp|Q8H157|PTR19_ARATH Protein NRT1/ PTR FAMILY 4.6; TrEMBL-Plants: tr|G7ILM2|G7ILM2_MEDTR Peptide/nitrate transporter; Found in the gene: LotjaGi6g1v0316200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63408821..63412778) extracted from Lotus japonicus Gifu genome v1.2.
CAAGACATCTTTCACTTCTCTCTCACATAGACTGCAACCAGAACATTGTCTTCCAAGATCGGAGAATCCCAGGTAAATAC ATTTTGCCACCATCTGCCAAGTACAGCTAGCGTATTCTGTCTCAATAAAACCGTTTATAGTCATTCCAAATAGTAATGAT GATGCACCATAACTATATCCGTTTTACACATTACTAAAGTTTTTTGTTTTTTATTTGGGTTGTTTAGTTGAATTTAATGT ATATAAAGACAGACATTGGTCTTCCCTGCTACCATTGTGTTTTCACCAGTTCAGCTCTTTCATTTGAATTTGTTACCTAA GTTGCTCTGCAGAGGCAAAGCCATGGTATGTATATTCCTTTGTTAATTCCACCCCCCTTTCAACTTTCTTCTACTCATGT TTTTCATTTATGTTGATGAAGGAAAAGTTTGAGGTTGTTGATTCGAAGGTGGAAGCAGAGATTCAGTTGGTTGATGAAAA TAAAGTGGATTGGAAAGGAAGAACTGCTCTCAAGTTCAAATATGGGGGGATGAAAGCTTCTTTGCTCATACTAGGTAATC ATACTATCCCATTTGGGTAAGAATATGGATTTGTTCCTTGTTAGTGATAAACAACTTACAAGAAAGATGAACCCAAGTTA AGATGGAAGATGGATTATGTGGTGTGTGTTTCGATAGCGATTGAGGTTTAGATGGATGTTGGCTCTAGTACAAGCAAACA TATGTTAACATGGAGTTGAAAACAAAAAGTGAACATAACTATTCTAATGAATTGAGATAAAAGATCATTTATGATATGCT CAACTAGTATCCAAACACTAGAAAGTAGAATTACATTCACTTTACACAATATAAAGTGCACACTCAAACTGATGCCAAAC ACAACCGTCATGGTTCTACTCAAAAGCAAGAAAAATATTTACAAGCTAATCTAGGTATATCAATTACCCTTTGAAGTTTC CAAGAAAAGGTAACAAATGAATAAGAAGAGAAGAGTGGCAATTCATGTACAACAATCTTTTAGGAGACACCGCGACACCT ACAATTTGTAGACGTTTCTGACCTCCACAAACTGCAGAGTTTATTAAAAAAAACTCTGCAATTTGTGGACGCCAGAAACC ACCTGCAAGTGCGTGTCCCAAACTCCCGGCGACTCACGAATCTTTAGCCATAAGAGACAATCTTTTGTTAAAACCAGAAA GTACATCATTCTTTGCTTTCTTGAATTAGGATTATCTTTGCACATTTTTTTGGTGTATATTGATGCAGTGACTTGAATTT GGATTTGGGTGCAGCCTTCCTTGGTTTGGAGAACATGGGAACTTTCTCCCTAGCTGTGAACTCGGTACCATATTTCAATG GGGTCATGCATTATGATCTAGCAGATGCAGCTAACATGCTCACCAACTACATGGGTACCAGTTACATACTCTCTATTTTT GTTGCTGTCCTTGCTGACACATGGATTGGCAGGTACAAATCGGTTATCTATTCTGGCTTCATTGAGTTTGTGGTAAGTTC TAAGCAAAGATTCCCTCATATATTAACACATCTTCAACATATATAACACTGCAAACCTCTAATCAACTAAAACATCTTCA CATATTATCAACCAATTTTCTGACAAAAATCTACTTAAAAGTTCAAGTACAAAACTCTATTTTCTGCTAAAGAGGTTAGT CGAACTAAAGATTTTAATTTCTTGTGTAAACTTAATGAATAAAAATAATTCATGAAGTTGTTATTGTGAACTGTGTTGCA GGGACTTGCATTGCTGACAGTCCAAGCACGCTATTCTAGCCTGAAGCCAGCCATCTGCAATATCAATGATCCAACTGATC ACTGTGAAACACTGAGTGGAAGCCATGAAGCTTTTCTCTTCATTGGCCTGTACTTAGTGGCCTTAGGCAGTGCAGGAACC AAAGCTGCATTGCCATCACACGGTGCAGATCAGTTTGATGAAAATGACCCAAAAGAAGCGATGCAAATGTCCACATTCTT CAACACTCTCTTACTTGCTATTTGCCTAGGTGGTTCTGTCAGCTTAACCTTCATTGTGTGGATCCAAATCAACAAAGGAT GGGATTGGGGCTTTGGAATTGGCACCATAGCTATACTTTTGGGCATCATAATCTTTGCAGCTGGATTGCCTTTATACAGA ATTCGTCTACCTCAAGGGTCAAATGCTTTCACTGAGATCATACAGGTATCTATGCCCTATAGTAAGCCTTATTGTTTAAT CTGATATAGTGCTTGTTTGGAAACTCATTGGTTCTGAAGCCGTAATCAATTTTGGGGAAAACCTAATGTGAGTAGTTTCT ATGTTTCATAACTAATTTTGATGAAAGAGAAGCAGATCCAAACATGCTAATAAACAGTTCGAAGCTCTATCTCTTGGACT ATAAGAAGCTGATATTTTGACTATAAGGTTTCAATTCAAATTTGAAATGAGCTTCAAAATTTAATTTGAAGATTGAAATA GTGGAGGTTTTTAAGAATCATACTGTGTTGATCAAGCTGTTTTAATTTTTGGTCATGTATGTTCAAGGTATTTGTTGCTG CACTGCGCAACAGAAGTCTTACCTTGCCTGAGGATCCAACAGAACTATACGAGATTGGACAGGACAAGGAAGCTGATGTG GAGATAGAGTTTCTACCTCATAGAGACATTTTCAGGTTCAACACCAATCATGTCCAAAAATACTCACATAGCTATATCTC TCTTACTCATAACTAAGTAAAAAAGGGATACAAAGTTAGAGTAAAAGGTTATATTGCATGTTTGGTTTCACAATTTGCAC CGAATCCAAAAACAATTCTAAAGCAATCCACCATGGAACTAAACATGCTATTACCGATCTTGTCGCACAAGATAATTCTG TTAACATTATAAAAAAATGATTCTAAACTCAAGTTTCCTTTTCACAGGTTCTTGGACAGAGCAGCCATCCAAGAAAATTT TGATGAGCAATCTAACTCTAACTCAGAGGCTCCAAACCCATGGAAACTTTGCAGGGTTACCCAAGTAGAAAATGCCAAAA TCATACTTGGCATGGTCCCAATATTCTGCTGCACAATTATAATGACCCTTTGCCTAGCTCAGCTCCAAACCTTTTCAATC ATACAAGGCTACACAATGGACACCAGCTTCACCAAACATTTTCACATCCCACCAGCATCCCTCCCAATCATCCCAGTCAT GTTCTTAGTCATAATTGTCCCTATCTATGACCGCATTTTCGTGCCTCTTTTGCGTAAATTCACCGGTATTCCTACCGGAA TTTCCCACTTGCAGCGCATAGGAGTTGGCCTAATACTCTCCTCCATATCCATGGCTGTGGCTGCAATCATAGAGGTGAAA AGGAAAAGAGTGGCCATTGAAAACAACATGCTTGATGCTTTTCCAGTGATTCAGCCATTGCCCATAAGCACTTTCTGGCT TTCTTTCCAGTACTTCATATTTGGCATAGCTGACATGTTTACCTATGTGGGGCTGCTTCAGTTTTTCTACTCAGAGTCAC CAAAAGGGCTTAAATCCACATCAACCTGCTTCCTTTGGACCTCTATGGCACTGGGGTATTTTCTAAGTACCATCATAGTG AAGTGTGTGAATGGTGCCACCAAGCATACTAAAAGTGGGGGCTGGTTAGCAGGGAACAATATTAACAGAAACCATGTTAA CCTGTTCTACTTTTTCCTTTCCATAGTGAGCTTGATCAACTTCTGTATCTATTTGATTCTTTCAAAGAGGTACAAGTACA GGCCTCAAGCCCTTACAGTCCCTAATGACAAATCAACAAAGGAGTGAAAATGGGGAAGAAAAAAAGGCTATAGACCACAT GATTACCTTTCACATTTTGAATCTTCTGTCTTATCTTATTTTGTAACTCAATTTTCAGTTTTATCAATGAAATCTTATGA TATCAATTATAAATTTGATACAGTTAATTTTATTTTTG
CDS sequence (LotjaGi6g1v0316200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGTTTGAGGTTGTTGATTCGAAGGTGGAAGCAGAGATTCAGTTGGTTGATGAAAATAAAGTGGATTGGAAAGG AAGAACTGCTCTCAAGTTCAAATATGGGGGGATGAAAGCTTCTTTGCTCATACTAGCCTTCCTTGGTTTGGAGAACATGG GAACTTTCTCCCTAGCTGTGAACTCGGTACCATATTTCAATGGGGTCATGCATTATGATCTAGCAGATGCAGCTAACATG CTCACCAACTACATGGGTACCAGTTACATACTCTCTATTTTTGTTGCTGTCCTTGCTGACACATGGATTGGCAGGTACAA ATCGGTTATCTATTCTGGCTTCATTGAGTTTGTGGGACTTGCATTGCTGACAGTCCAAGCACGCTATTCTAGCCTGAAGC CAGCCATCTGCAATATCAATGATCCAACTGATCACTGTGAAACACTGAGTGGAAGCCATGAAGCTTTTCTCTTCATTGGC CTGTACTTAGTGGCCTTAGGCAGTGCAGGAACCAAAGCTGCATTGCCATCACACGGTGCAGATCAGTTTGATGAAAATGA CCCAAAAGAAGCGATGCAAATGTCCACATTCTTCAACACTCTCTTACTTGCTATTTGCCTAGGTGGTTCTGTCAGCTTAA CCTTCATTGTGTGGATCCAAATCAACAAAGGATGGGATTGGGGCTTTGGAATTGGCACCATAGCTATACTTTTGGGCATC ATAATCTTTGCAGCTGGATTGCCTTTATACAGAATTCGTCTACCTCAAGGGTCAAATGCTTTCACTGAGATCATACAGGT ATTTGTTGCTGCACTGCGCAACAGAAGTCTTACCTTGCCTGAGGATCCAACAGAACTATACGAGATTGGACAGGACAAGG AAGCTGATGTGGAGATAGAGTTTCTACCTCATAGAGACATTTTCAGGTTCTTGGACAGAGCAGCCATCCAAGAAAATTTT GATGAGCAATCTAACTCTAACTCAGAGGCTCCAAACCCATGGAAACTTTGCAGGGTTACCCAAGTAGAAAATGCCAAAAT CATACTTGGCATGGTCCCAATATTCTGCTGCACAATTATAATGACCCTTTGCCTAGCTCAGCTCCAAACCTTTTCAATCA TACAAGGCTACACAATGGACACCAGCTTCACCAAACATTTTCACATCCCACCAGCATCCCTCCCAATCATCCCAGTCATG TTCTTAGTCATAATTGTCCCTATCTATGACCGCATTTTCGTGCCTCTTTTGCGTAAATTCACCGGTATTCCTACCGGAAT TTCCCACTTGCAGCGCATAGGAGTTGGCCTAATACTCTCCTCCATATCCATGGCTGTGGCTGCAATCATAGAGGTGAAAA GGAAAAGAGTGGCCATTGAAAACAACATGCTTGATGCTTTTCCAGTGATTCAGCCATTGCCCATAAGCACTTTCTGGCTT TCTTTCCAGTACTTCATATTTGGCATAGCTGACATGTTTACCTATGTGGGGCTGCTTCAGTTTTTCTACTCAGAGTCACC AAAAGGGCTTAAATCCACATCAACCTGCTTCCTTTGGACCTCTATGGCACTGGGGTATTTTCTAAGTACCATCATAGTGA AGTGTGTGAATGGTGCCACCAAGCATACTAAAAGTGGGGGCTGGTTAGCAGGGAACAATATTAACAGAAACCATGTTAAC CTGTTCTACTTTTTCCTTTCCATAGTGAGCTTGATCAACTTCTGTATCTATTTGATTCTTTCAAAGAGGTACAAGTACAG GCCTCAAGCCCTTACAGTCCCTAATGACAAATCAACAAAGGAGTGA
Protein sequence (LotjaGi6g1v0316200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKFEVVDSKVEAEIQLVDENKVDWKGRTALKFKYGGMKASLLILAFLGLENMGTFSLAVNSVPYFNGVMHYDLADAANM LTNYMGTSYILSIFVAVLADTWIGRYKSVIYSGFIEFVGLALLTVQARYSSLKPAICNINDPTDHCETLSGSHEAFLFIG LYLVALGSAGTKAALPSHGADQFDENDPKEAMQMSTFFNTLLLAICLGGSVSLTFIVWIQINKGWDWGFGIGTIAILLGI IIFAAGLPLYRIRLPQGSNAFTEIIQVFVAALRNRSLTLPEDPTELYEIGQDKEADVEIEFLPHRDIFRFLDRAAIQENF DEQSNSNSEAPNPWKLCRVTQVENAKIILGMVPIFCCTIIMTLCLAQLQTFSIIQGYTMDTSFTKHFHIPPASLPIIPVM FLVIIVPIYDRIFVPLLRKFTGIPTGISHLQRIGVGLILSSISMAVAAIIEVKRKRVAIENNMLDAFPVIQPLPISTFWL SFQYFIFGIADMFTYVGLLQFFYSESPKGLKSTSTCFLWTSMALGYFLSTIIVKCVNGATKHTKSGGWLAGNNINRNHVN LFYFFLSIVSLINFCIYLILSKRYKYRPQALTVPNDKSTKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 19 | 593 | 575 | 5.0E-301 | ||
| PANTHER | 19 | 593 | 575 | 5.0E-301 | – | |
| CDD | 38 | 583 | 546 | 0.0 | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| SUPERFAMILY | 40 | 587 | 548 | 6.28E-21 | ||
| Phobius | 42 | 66 | 25 | - | – | |
| Phobius | 67 | 85 | 19 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 86 | 103 | 18 | - | – | |
| Phobius | 104 | 109 | 6 | - | – | |
| Pfam | 106 | 545 | 440 | 2.0E-90 | ||
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 110 | 129 | 20 | - | – | |
| Phobius | 130 | 154 | 25 | - | – | |
| TMHMM | 155 | 177 | 23 | - | – | |
| Phobius | 155 | 175 | 21 | - | – | |
| Phobius | 176 | 195 | 20 | - | – | |
| Phobius | 196 | 221 | 26 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 222 | 226 | 5 | - | – | |
| Phobius | 227 | 250 | 24 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 251 | 346 | 96 | - | – | |
| Phobius | 347 | 368 | 22 | - | – | |
| TMHMM | 347 | 369 | 23 | - | – | |
| Phobius | 369 | 387 | 19 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 388 | 409 | 22 | - | – | |
| Phobius | 410 | 429 | 20 | - | – | |
| TMHMM | 430 | 452 | 23 | - | – | |
| Phobius | 430 | 450 | 21 | - | – | |
| Phobius | 451 | 481 | 31 | - | – | |
| Phobius | 482 | 504 | 23 | - | – | |
| TMHMM | 482 | 504 | 23 | - | – | |
| Phobius | 505 | 515 | 11 | - | – | |
| Phobius | 516 | 540 | 25 | - | – | |
| TMHMM | 517 | 539 | 23 | - | – | |
| Phobius | 541 | 559 | 19 | - | – | |
| TMHMM | 559 | 581 | 23 | - | – | |
| Phobius | 560 | 580 | 21 | - | – | |
| Phobius | 581 | 601 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0316200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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