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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0321200 |
Transcript ID | LotjaGi6g1v0321200.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT5G45780.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780; TrEMBL-Plants: tr|A0A072V5I6|A0A072V5I6_MEDTR LRR receptor-like kinase; Found in the gene: LotjaGi6g1v0321200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63762509..63764133) extracted from Lotus japonicus Gifu genome v1.2.
GTGCAGTTTCAAACAGAGGTTGAGATGATTGGCTTGGCTGTGCATCGGAATCTCTTGCGTCTTTATGGATTTTGTATGAC ACCAGATGAAAGGTTACTTGTTTATCCATACATGCCCAATGGCAGTGTGGCTGATCGCTTGAGAGGTTCGTTTCATATTA TTCAATTCTGTACTTGCCTGTGTAAAGTTTAACCAATATAAATACATGCCATCTTACAGTTGAAATTATGAGAGCTGTGT CTTCAAATCAATACATTTGGTAACTCAATTACTTAGGGATGTCATAAAATAGTGATTTTTCTGTGAGTTTGTCCTTGCAG CCTGTCACCTTAAATTTGCAGCTCATGCTCTATGATAATTATGAATTTTTTTTATCTTGTAATCTATTCAATTAAGAAAC TTTTTTTATTCTTCCAAAGTTCATGCAGAATCTTTATTAAATACACATTTCTCTTCTGTATTCTAATGTCAACATAGTAT GATGGATTTCTTCTTTTCCCATATTCTTAAGCAGAGCCTTGTCGTGAAAAGCCAGCTTTGGACTGGAACAGGCGAATGCG TGTTGCTCTCGGGGCTGCCCGTGGACTTCTGTATTTGCATGAACAGTGCAATCCGAAAATAATCCACAGGGATGTTAAGG CTGCAAACATTTTGTTGGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTCGCTAAGCTCTTGGATCAAAGGGAT TCACATGTAACTACTGCAGTACGGGGTACTGTAGGGCACATTGCCCCTGAGTATCTCTCTACTGGACAGTCTTCTGAAAA AACAGATGTTTTTGGATTTGGCATATTACTTTTGGAGCTCATAACTGGACAAAAGGCACTGGATGCGGGCAATGGTCAGG TCCAAAAGGGAATGCTCCTTGATTGGGTAAGAAGCTTTTCAAATTGTTCAAAAGCTCACATCCTCACCTTTTATATCATA TCTGTGTTGTCCCATTAATCTTTACATGATAAATCATCTTCAGACCTTGAGCCCGTTCCCGTATGAGCTTTTTGGAGCTT ATCTACTAGAAATTGCTCTGTATAAGCTCCAATAAGTGCTCTTTGGTTTGCTTCCAAACAGGTACCGTATCATGATTAAC TAAGATCGCACAGAGGCTAGCTTGCTAAGAATGTCGCTTCATTTCTTTTTACTCTTGGTGTGAACTTCTGAAGTGTTTCT TGTATCTTGCTCCAAATCTAGTTTCATGTAAATCATGGCTTTAGGCTTTTGTATCCTAAAGATTAAATTGATCACAAATT TTGAGTAAACCAGCTGAATTCCTGCAGGTTAGAACCCTATTTGAGGAGAAGCGACTAGAAGTGTTTGTTGATAGGGATCT GAAGGGATGTTTTGATCCAGAAGAGCTAGAAAAAGCAGTGGAGCTGTCTTTACAATGTACTCAGTCACTTCCTAGTTTGA GACCTAAGATGTCAGACGTTTTGAAGATTTTAGAAGGCCTGGTTGGGCTGTCAGCGCGGCCGGAGGAGTCACAAGGGGGA GCAAACCTATATGATGAAAGGACTCGCAGTTTCTCGCAGAATAGCGATGTTCATGAAGAACCTTCCTTCATCATTGAAGC CATTGAGCTTTCTGGACCTCGGTGA
CDS sequence (LotjaGi6g1v0321200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGTTGCTCTCGGGGCTGCCCGTGGACTTCTGTATTTGCATGAACAGTGCAATCCGAAAATAATCCACAGGGATGT TAAGGCTGCAAACATTTTGTTGGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTCGCTAAGCTCTTGGATCAAA GGGATTCACATGTAACTACTGCAGTACGGGGTACTGTAGGGCACATTGCCCCTGAGTATCTCTCTACTGGACAGTCTTCT GAAAAAACAGATGTTTTTGGATTTGGCATATTACTTTTGGAGCTCATAACTGGACAAAAGGCACTGGATGCGGGCAATGG TCAGGTCCAAAAGGGAATGCTCCTTGATTGGGTTAGAACCCTATTTGAGGAGAAGCGACTAGAAGTGTTTGTTGATAGGG ATCTGAAGGGATGTTTTGATCCAGAAGAGCTAGAAAAAGCAGTGGAGCTGTCTTTACAATGTACTCAGTCACTTCCTAGT TTGAGACCTAAGATGTCAGACGTTTTGAAGATTTTAGAAGGCCTGGTTGGGCTGTCAGCGCGGCCGGAGGAGTCACAAGG GGGAGCAAACCTATATGATGAAAGGACTCGCAGTTTCTCGCAGAATAGCGATGTTCATGAAGAACCTTCCTTCATCATTG AAGCCATTGAGCTTTCTGGACCTCGGTGA
Protein sequence (LotjaGi6g1v0321200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSS EKTDVFGFGILLLELITGQKALDAGNGQVQKGMLLDWVRTLFEEKRLEVFVDRDLKGCFDPEELEKAVELSLQCTQSLPS LRPKMSDVLKILEGLVGLSARPEESQGGANLYDERTRSFSQNSDVHEEPSFIIEAIELSGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 184 | 184 | 9.3E-84 | – | |
Gene3D | 1 | 178 | 178 | 8.2E-55 | – | |
PANTHER | 1 | 184 | 184 | 9.3E-84 | – | |
ProSiteProfiles | 1 | 176 | 176 | 25.05 | ||
SMART | 2 | 171 | 170 | 9.8E-4 | ||
SUPERFAMILY | 2 | 173 | 172 | 4.86E-43 | ||
Pfam | 7 | 170 | 164 | 2.2E-25 | ||
ProSitePatterns | 22 | 34 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0321200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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