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LotjaGi6g1v0342700.2

Overview

Field Value
Gene ID LotjaGi6g1v0342700
Transcript ID LotjaGi6g1v0342700.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase; TAIR: AT1G65790.1 receptor kinase 1; Swiss-Prot: sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7; TrEMBL-Plants: tr|A0A0L9VFN1|A0A0L9VFN1_PHAAN Serine/threonine-protein kinase; Found in the gene: LotjaGi6g1v0342700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:65584280..65587678) extracted from Lotus japonicus Gifu genome v1.2.

AATATTAATTAATACTAATCAATGATGAAGTGATACGTTAAAAGCTTAAATACGTTGCATTATTGAAAACTATTGATTTG AGTCTCTCATTATTTTTTAATTGGATAAGTTGCACTCACATTTCCTAAAGTTTATTATTACACTGATCTCTCATTTTTAT TTCATAAGAAACATTACACTAACCTCTCATGAGATTTATCATTATTGTCTTTTTTATAAGAAATGTTCATGTATTTTTTT TTTTTTGCAGATGACTTAGAATCTACAGACGGCTCTCACAAGAAAATTTTTAGTGCTAGAACTGCAGGAATTACAATTTG TGTAGCGGTTGTAACTTTGGGGTTAGGTGTCATTTTATTTAGAAAGAGGAAATTGCTAACTAGATTCAATGGGAAGACGG ACCCCAGAGGTAATGTACCAAACTTCTAAATGCTTATTGATATGCTGGTGTGATACTTCTAGCTTCTACATAATAAAATG CTTTGGTTATTGTCAATAAATAAATCAGGTCCTCTCCAAAGAAGTCGCGATTTACTAATGAATCAGGTGATATTCTCAAT TGAAAGAGATGGAGAAAGCTCGAGAGAAATGAACATGGATGAACTAGAGTTGCCAATGTTTGATTTTAATACCATAGCAA TGGCTACTAACAACTTCTCTGAAGAAAATAAACTTGGGGAAGGAGGCTTTGGTAGTGTTTATAGGGTAAGTTGTTTTTAT AGCTTCCATGATAATTCAAAATCACAATGCAATGCACACATAACACACCTATCCTAACTGGAGTGACTCTGGCTATACCA GGGCAGTTTAATGGAAGGCCATGAAATTGCTGTTAAGAGATTGTCAAAGAACTCTGGCCAAGGAACTGAAGAATTTTTAA ATGAGGTCAAGTTGATTGTCAAGCTTCAACATCGAAATCTTGTGCGACTATTTGGTTGTTGCATTGAGATGGATGAAAAG TTGCTGGTGTATGAGTACTTGGAGAATAAAAGCCTTGATTCCATTTTGTTTGGTGAGTTGATTTAATGTTTTGTATCTTA AATCTTTTTTAATTTGTTTGCAAAATGTAGAGAAACAGCAGGCTTTATTAATTTCAATCAAATACTTTATAATAAATAAT GCTCCAGACAAAGCCAGAAAAGACTTACTAGATTGGAAGAAGCGATTCAACATTATATGTGGAATAGCTAGAGGGCTTCT TTATCTGCATCATGATTCTAGATTCAAGATTATCCATAGGGATCTCAAGACAAGCAACATTCTACTTGACAGTGAAAGAA ACCCAAAAATATCAGACTTTGGGATGGCAAGAATTTTTGGCACAAATCAGATAGAAGCAAATACACTCAGAGTTGTTGGA ACATAGTGAGTACCTACCAACCACAATATTGTACTAACTTGCTCTCTAAAATACCAAATATATAGCACCTTATTCTTTAT TTATATATTCTTTTATTGTGCAGTGGCTATATGTCTCCTGAATATGCTATGTATGGAAAATTTTCAGCGAAGTCTGATGT TTTTAGCTTTGGAGTTCTAGTGCTAGAAATCATATCTGGAAAGAAAAACAGAGGATATAACTCAAGCGAGGATACGAATC TTTTAGAGCATGTATGTGAAAGATTTTTTAAAGATTTTTTGATTAAAGTTCTATGCAATTGTTAGTATCATGTTGTGCTA ACAAACAATTGATAATGCTTTCTTTATTGTTGTAGGCTTGGAGGTTGTGGAGAGAAGGCAATGCATTGAGACTTATTGAT CAATCAATTAATGATTCAAATTCGATATCTGAAGTTCTGAGATGCATACATATTGGACTCTTGTGTGTCCAAGAATGTGC ACAGGATAGACCTACAATGTCCTCAGTGATTTTGATGTTGAACAGCGAAGTTGCAATAATGCCTCAACCAAGGAACCCTG GGTTTTCCCTAGGAAAGAGTCCTCCAGAAACTGATTCTTCTTTAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTC ACAGTCACATTGCCGGATGCAAGATAATGGAAAAACCATGACATCATATAACATGATGTATATTTCTCTAAACAAAACAA AAAAGTCTGTAAATCTTCCCTTGTCTGGTAGTTGAGGCATTTTTAAGATTTACTTTTGATCTTGTTTTGGTGTAATATGC AAGAGATATAATGCAAGAGATAACCAAACGAAAAACAACTTCCCTACATAAATCTCTAAAAAATAAATCCCTATTTTATA CAACCTTAAAAACACTTTTTTTAAAAACCTTAAGCAAACATGTTTGGTAAAAAATCTTGATTTCTGGTTATTCGGGTGAG TAGTGTATATTTCAACCATGGCATCATCAACATGTACTCCTCTGCAAGTTTGTCAAAATGTAAGAACATTGAAGGATGTC ATCAATAATGCGTACATCAATAGGATGGATAACAGCCAACTTTCCTTCTTTCATATGTCCACACAACTCTTTCAACATAA GAAAACAAAACCCCAGAATTAAAAATTACAATATAGTGATGACAAAAGAATCATATAATCAATCTAAACATTGGCAAACT TAGGGAAGACAGAAAAATCACCAAACCGAAAAAAGAACAAATAATAACAAGATTCAGAAAGGTAAAAGAAGCATCTCATG CTTATCATGTTGCTCCATTAGGCATGCTTGTTCACATATCTACTTCACATGAAGTTCTCTCAAAACTCTTAGCTTTAGAA AAGTGCACCAACACAGGAGAACAGAAAATCCTCATAACCCTATGCTTTGACTTCCACGCCCCAACCTTGAACCTTATCCT TGCCCTGACCAGAACATCCAACTCAATATCCCCTGAGGACCTCTCTAGCCGAAGGTCCTTAGGCACAGGATCATACAAGG CCACAGTTTGAGCCGTGAGCTTCGGGTATAGCCTAGTCACATTCTTATGAGGCTGCAAGAATGGCTGAACTGAACTTGTG GCTAGTGTTTGATCCTCATACCGCACCGAAACCTCGACAGAATCATAGTACAGGGAGACTCTGGAGTTGGGATTGTATGA TCTTAATGTGAAATCGAAATTGGCATAGAGGTGATTGGAATTGGTTAAGTTGAAGTTATGGATTGAAGCACTCTCCACAC TGTACTCCAAGTGCTTAGGCTTCAGAACTAGCCAAATTATGATCACTGCTATGCCCACAAGGATTATCAAGGCCAAAATT GCCATGGCTATGTAACGTAGCAGGTTTGTGCGTTTCGGCCTCACTCCTTGAGACTGTGAGGGAGAAGGATGAGCCATTTC AGAAGGGCTAAGCTAATTCTATTAAGGGTAAGTAGTGTTTGATTGAAGAAGCAAATCAAATCATGCATGTTTATATAAAG ATTGGACCTGCCTTTGAAACTTTTTCTTTATGAGCACTT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0342700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAAGAATTTTTGGCACAAATCAGATAGAAGCAAATACACTCAGAGTTGTTGGAACATATGGCTATATGTCTCCTGA ATATGCTATGTATGGAAAATTTTCAGCGAAGTCTGATGTTTTTAGCTTTGGAGTTCTAGTGCTAGAAATCATATCTGGAA AGAAAAACAGAGGATATAACTCAAGCGAGGATACGAATCTTTTAGAGCATGCTTGGAGGTTGTGGAGAGAAGGCAATGCA TTGAGACTTATTGATCAATCAATTAATGATTCAAATTCGATATCTGAAGTTCTGAGATGCATACATATTGGACTCTTGTG TGTCCAAGAATGTGCACAGGATAGACCTACAATGTCCTCAGTGATTTTGATGTTGAACAGCGAAGTTGCAATAATGCCTC AACCAAGGAACCCTGGGTTTTCCCTAGGAAAGAGTCCTCCAGAAACTGATTCTTCTTTAAGTAAGCAAGATGAATCATGG AGTGTGAACCAAGTCACAGTCACATTGCCGGATGCAAGATAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0342700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MARIFGTNQIEANTLRVVGTYGYMSPEYAMYGKFSAKSDVFSFGVLVLEIISGKKNRGYNSSEDTNLLEHAWRLWREGNA LRLIDQSINDSNSISEVLRCIHIGLLCVQECAQDRPTMSSVILMLNSEVAIMPQPRNPGFSLGKSPPETDSSLSKQDESW SVNQVTVTLPDAR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.510.10
1 134 134 9.6E-30 –
ProSiteProfiles
PS50011
1 173 173 9.022
IPR000719
PANTHER
PTHR27006
2 137 136 3.5E-49 –
PANTHER
PTHR27006:SF207
2 137 136 3.5E-49 –
SUPERFAMILY
SSF56112
2 154 153 1.78E-22
IPR011009
Pfam
PF07714
21 122 102 2.0E-9
IPR001245
Pfam
PF11883
127 173 47 4.6E-15
IPR021820
MobiDBLite
mobidb-lite
136 162 27 - –
MobiDBLite
mobidb-lite
144 162 19 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0342700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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